Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063397
CDS Infomation

pacid=37461391 polypeptide=PGSC0003DMP400042689 locus=PGSC0003DMG400024659 ID=PGSC0003DMT400063397.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGATTAGGAGGAGAAAACTAGTGGAGGATCATTTACACTTGCAAGCATTAGAG
TCGAAGTCTTTTGTGTCACAATTAAGGTCTGAAATTTCTCAGAAATCCCACTGCCAGATG
GTTTTAGACCTCACAAGCATTGAGCCATCTACACTATGTGGAGAAACTTTTCAAGGTTCT
TCAAATTCTATTGCTGGTCAGAGAGTGCCATCAGGTGCTGACTTATTGGCTGAACAAAAT
GTTACAAAAGAAAGGAAAATATCTTCTTCGAAGAGCAGTGCATCCAGGAAGAGAATGTTG
GATCTTGAACTTCCTGCAGAAGAATACATGGATATTGAAGACGGAGAACAATTTGTAAGG
GAAAGTTCTGTTCAAGGGCCCAATATTGTGATTTCAGAGCTTCAACCTCAGGATAGTTCA
AAAGTCAACTTTGCTAATCCAGGAGATCCTTCAATTTCTAACTCAAGTCCTAGGGGTAGC
TTTCTTTTGTTTGACCTGAATGAACCAATACAGCTTGATGAAACAGGGTATCCAAATTCT
GCACTTGAGTCTGTTAACATTCATGAGGAAATCAGCAACATGGATCAGGATCTATCTGGA
ACAGTGCATGCTGACTGCTCAACTCTGGAGAAAGAAGTTACAGGGGGAGATATAAGCAAC
ATGAATTCTTCTGATGAAGTTTCTTCTGTTGAGACGACACTTCTTCAATGTAATCAAACA
GCAAGTTTATCTCCTGGATTTGTAGATAAGAGTCATAATGGAACAAGAATTGACAAATCA
TTGCTAGTTTCTTCTCGGAAAAAAATGAAGGAGATACCCTTTGCAGTTCAAGCTCTTCCA
TGCTTTATTACTAATTCATCACTCAGTAAGAGTCCTAACTCTTCTGTTGGGAACTCTAGT
CTCACTGGAAAGAAGAGTGACCTGTACAACAGTAGTGCTTCTAGTCCAACTTCTGGCACA
TCAGGCTCATGCTTGATGAAATATGGTGATAATGAATCTACATCTGGAAAACCTGATGCT
GTTAAGCTATCTGACATTCCAGATAGCATGAGTTCAATGAAGGGTATGGACTTGAATTGC
ACACCTTATGCCGATTTGTCTGACAATCAGCTTACCACCCCTACCTCCATTTCACATCTA
AATCTCTCTGAAGGTGTAGAAAGAGAGATTTGTGGAACCGTTCTTCTTGATTGTATCCTG
AGTCCTGATTCTGCAGTCGAATCTGGTAAATCTAGCAGGGATAGTCACTTTGTAGGACCT
GGAAGTGATAGCAAGTTTCTGACAACTAATTCTTGCATTAACATGTCCTGCATCAAGGAC
GAAACTTTTTCATCTGGTCACAGTGAAGCAACAATGACTCCTGTGGACAGAGATTTGGAA
GCTCCTATAGGCCCAGAAAACAAGGAATATTCTCCACCTAGAGGAGATTCTCTGGACAAA
ACAATTGGTAAGTCTGTCCAGTGGTCTAAAATATACCACATGAATGATCACGCTGGAAAA
ACCGACAGGGCTGCAGCAGAGATCCTGCTTTTTATTTCATCATCTCGGGGAAATTCAAAG
ACTGCCAAAGGTGGACCATCTGAAGCTTCTCATGACACTCTGGGCTGGCTTGCTGATATT
GCAACTTCTTCGGCAAGTAATCCTGAGAAAGAGGTTGGAGAATTCACGAACCTCCATTGT
CATCGCAATACACTTATATCAGACAGGAGCAACTGCAATGAGGTCGTGAAGCTCACACGC
AAAGGGGGAACTGAGAAGGAAGCAGTATGCAATACTTTGCATAGTCGGACAAGGAGGAGC
CAACCTAGGAGAGCAAACTATCAGAGGGTCCTTCAAACAGAACCACATCCTGCTGGTGCC
TCTGTTTCTCTGCATCAGTTGAATGGAGGTCTAGAGTCACCTGCAACTGCTGCATCAGAA
TCAGGTCCATCGAGGAAAACTCCACTCAGGGCTAGTTCGAGAAGTAGGAGATGGTCCCCT
ATTGCGAGAAGAACAACATGCTCACTGTTACAACCACATCCTAGTAATGACAAGGAAGGC
ATTACAGAGAAAGTCTGGAAAGGCTGGGGGTTAACAAAAGAACGGCAAAACAGTCGAAGA
CCTCGTTGTATCTTCTCTTTTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042689
PEP Infomation

pacid=37461391 transcript=PGSC0003DMT400063397 locus=PGSC0003DMG400024659 ID=PGSC0003DMT400063397.v4.03 annot-version=v4.03
Sequence

MEEIRRRKLVEDHLHLQALESKSFVSQLRSEISQKSHCQMVLDLTSIEPSTLCGETFQGS
SNSIAGQRVPSGADLLAEQNVTKERKISSSKSSASRKRMLDLELPAEEYMDIEDGEQFVR
ESSVQGPNIVISELQPQDSSKVNFANPGDPSISNSSPRGSFLLFDLNEPIQLDETGYPNS
ALESVNIHEEISNMDQDLSGTVHADCSTLEKEVTGGDISNMNSSDEVSSVETTLLQCNQT
ASLSPGFVDKSHNGTRIDKSLLVSSRKKMKEIPFAVQALPCFITNSSLSKSPNSSVGNSS
LTGKKSDLYNSSASSPTSGTSGSCLMKYGDNESTSGKPDAVKLSDIPDSMSSMKGMDLNC
TPYADLSDNQLTTPTSISHLNLSEGVEREICGTVLLDCILSPDSAVESGKSSRDSHFVGP
GSDSKFLTTNSCINMSCIKDETFSSGHSEATMTPVDRDLEAPIGPENKEYSPPRGDSLDK
TIGKSVQWSKIYHMNDHAGKTDRAAAEILLFISSSRGNSKTAKGGPSEASHDTLGWLADI
ATSSASNPEKEVGEFTNLHCHRNTLISDRSNCNEVVKLTRKGGTEKEAVCNTLHSRTRRS
QPRRANYQRVLQTEPHPAGASVSLHQLNGGLESPATAASESGPSRKTPLRASSRSRRWSP
IARRTTCSLLQPHPSNDKEGITEKVWKGWGLTKERQNSRRPRCIFSFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400063397
Transcript Infomation

pacid=37461391 locus=PGSC0003DMG400024659 ID=PGSC0003DMT400063397.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGATTAGGAGGAGAAAACTAGTGGAGGATCATTTACACTTGCAAGCATTAGAG
TCGAAGTCTTTTGTGTCACAATTAAGGTCTGAAATTTCTCAGAAATCCCACTGCCAGATG
GTTTTAGACCTCACAAGCATTGAGCCATCTACACTATGTGGAGAAACTTTTCAAGGTTCT
TCAAATTCTATTGCTGGTCAGAGAGTGCCATCAGGTGCTGACTTATTGGCTGAACAAAAT
GTTACAAAAGAAAGGAAAATATCTTCTTCGAAGAGCAGTGCATCCAGGAAGAGAATGTTG
GATCTTGAACTTCCTGCAGAAGAATACATGGATATTGAAGACGGAGAACAATTTGTAAGG
GAAAGTTCTGTTCAAGGGCCCAATATTGTGATTTCAGAGCTTCAACCTCAGGATAGTTCA
AAAGTCAACTTTGCTAATCCAGGAGATCCTTCAATTTCTAACTCAAGTCCTAGGGGTAGC
TTTCTTTTGTTTGACCTGAATGAACCAATACAGCTTGATGAAACAGGGTATCCAAATTCT
GCACTTGAGTCTGTTAACATTCATGAGGAAATCAGCAACATGGATCAGGATCTATCTGGA
ACAGTGCATGCTGACTGCTCAACTCTGGAGAAAGAAGTTACAGGGGGAGATATAAGCAAC
ATGAATTCTTCTGATGAAGTTTCTTCTGTTGAGACGACACTTCTTCAATGTAATCAAACA
GCAAGTTTATCTCCTGGATTTGTAGATAAGAGTCATAATGGAACAAGAATTGACAAATCA
TTGCTAGTTTCTTCTCGGAAAAAAATGAAGGAGATACCCTTTGCAGTTCAAGCTCTTCCA
TGCTTTATTACTAATTCATCACTCAGTAAGAGTCCTAACTCTTCTGTTGGGAACTCTAGT
CTCACTGGAAAGAAGAGTGACCTGTACAACAGTAGTGCTTCTAGTCCAACTTCTGGCACA
TCAGGCTCATGCTTGATGAAATATGGTGATAATGAATCTACATCTGGAAAACCTGATGCT
GTTAAGCTATCTGACATTCCAGATAGCATGAGTTCAATGAAGGGTATGGACTTGAATTGC
ACACCTTATGCCGATTTGTCTGACAATCAGCTTACCACCCCTACCTCCATTTCACATCTA
AATCTCTCTGAAGGTGTAGAAAGAGAGATTTGTGGAACCGTTCTTCTTGATTGTATCCTG
AGTCCTGATTCTGCAGTCGAATCTGGTAAATCTAGCAGGGATAGTCACTTTGTAGGACCT
GGAAGTGATAGCAAGTTTCTGACAACTAATTCTTGCATTAACATGTCCTGCATCAAGGAC
GAAACTTTTTCATCTGGTCACAGTGAAGCAACAATGACTCCTGTGGACAGAGATTTGGAA
GCTCCTATAGGCCCAGAAAACAAGGAATATTCTCCACCTAGAGGAGATTCTCTGGACAAA
ACAATTGGTAAGTCTGTCCAGTGGTCTAAAATATACCACATGAATGATCACGCTGGAAAA
ACCGACAGGGCTGCAGCAGAGATCCTGCTTTTTATTTCATCATCTCGGGGAAATTCAAAG
ACTGCCAAAGGTGGACCATCTGAAGCTTCTCATGACACTCTGGGCTGGCTTGCTGATATT
GCAACTTCTTCGGCAAGTAATCCTGAGAAAGAGGTTGGAGAATTCACGAACCTCCATTGT
CATCGCAATACACTTATATCAGACAGGAGCAACTGCAATGAGGTCGTGAAGCTCACACGC
AAAGGGGGAACTGAGAAGGAAGCAGTATGCAATACTTTGCATAGTCGGACAAGGAGGAGC
CAACCTAGGAGAGCAAACTATCAGAGGGTCCTTCAAACAGAACCACATCCTGCTGGTGCC
TCTGTTTCTCTGCATCAGTTGAATGGAGGTCTAGAGTCACCTGCAACTGCTGCATCAGAA
TCAGGTCCATCGAGGAAAACTCCACTCAGGGCTAGTTCGAGAAGTAGGAGATGGTCCCCT
ATTGCGAGAAGAACAACATGCTCACTGTTACAACCACATCCTAGTAATGACAAGGAAGGC
ATTACAGAGAAAGTCTGGAAAGGCTGGGGGTTAACAAAAGAACGGCAAAACAGTCGAAGA
CCTCGTTGTATCTTCTCTTTTAGCTGA