Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063387
CDS Infomation

pacid=37459521 polypeptide=PGSC0003DMP400042681 locus=PGSC0003DMG400024656 ID=PGSC0003DMT400063387.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGATGGTTGTTGGCATACCTGCACATCTGGAGAGAATTGAGCGTGATGCTCGC
TTTTTGAGAAGGAACTCAACTGGCAGCTTTGGCTTTCAAATTGCTAAATCCAAGGTCTTG
TCACGTTACCTGAGCGATCCAAAAGGTTCTTGCCATGACGCTTGCAAAGGTGCTGAACGT
GATGATCAAACAACAATAGCAAGGACTTCCCTGCTGAGTAGAACAGTAGTAGCATCAGAA
AAAATACCAGAATTGACTACAACTGTACAGGTGCAGATAAGGAAGAAACCACTACGCTCG
AGTAAGCTACCTGTGAATTTCAAGAGGCGTACAACTGGTAAATCCCAGAGACAGGAGATC
CCAGCATACGCCAAAAGATTAGCTGTTTCTGTAAAACAACGGAACGGTTTGAAGATGAAG
TCGTTGCAGGAAAATGCTAATTCTATGTCCGGAATCTATAAGCTGAGGATAAGAGGATAC
AGCGACACTATCATACCAGGGGGATCATCAATTGCTCAGAATTCTCCGTTGGATGGTGCA
ACCGGCACACCAAACAAAGGAAGCAGGATGGACAAGAACACTGGGTCTTCTAAGTTGGGC
AACAAGAAGGTTGTCGGAAAACCTGCAAACTTGGAGAAAATTGAGCATGAACTCAGTTAT
TTGAGAAGGAACTCAACTGGCAATTTAGGTATTGAAATGGGTGACTCCAAGGTCTTGCCA
CGTCATGTGAGTGTTCCAACAGGTTCTTCTGACGCTAACAAAGATGGTGCGGAACTCAAC
TGTAAAACAAAGGCGAGGACTCACATGTCCAAAACATCTGTAACTTCATCAGGAGAAAAT
TCAAAATTGGCTACAACTGTGAAGTGGCAGATACGGAAGAAACCACTACACTCAACTAAA
CTACCTGCAAATATCAGAAGGCTGAAAACTTCCCATGGAAAGGAAATACAAGCATGCACC
AAAAAATTAGCCGTTTCTGCAAGGCATCGAAGTGATTTGAAGCTGAAGCCTCTTGGAGAA
AATGATTATTCTGTGTCAAGAAGCAACAAACTAAGCAGAAGAAGATACAGTGACAGTCTT
ATGACAGGGGTTTCGCTCACACTTAAGGGGTCTATATTGGATGATGCAACCACCAAAACA
AACACAGGAAGCAGGATGGATAAAGACACTGCATCTTATGAGTTGAGCAAGAAAAACGAT
GTTGGCATGCCAGTGAACCTGGACAAAATTGAGTCCGGAGTCGGCTATTTGAGAAGGAAC
TCAACTGGAAGCTCAGGTATTGAAATAGGTGAATCCAAGGTCTTGTCATGTTCTCCGAGT
GTTCCAACAGGTTCTCGCCAAGAAGTTCGCAAATACACAGTTGCAAGTGATCTTAAAAAG
AAGGTGAGGACTCTCCAGCGCACAAGACCTGTAGCAGCATCAGGAGAAATCCCAGAAATG
GCTAGAACTGTGAAGTTGCAGATAGGGAAGAAACCATTAAGCTCAACCAAGCTCCCAAAT
TTCAAGAGCCAGACAACTTTTCGAACCCAGGGAAAGAAAATCCCAGCATCCACCAAAATA
GCAGTCGAAAAAGGATCCTCCGGGTTGAGCAAGAAGAAGGATGCCATAACTATTTCCCAC
TCTACAAGAATTTCTGTGAAGAGGGTATCAGGCAAAAAGTTAAATAACAATTCCCCCGGA
ATGGTATCTCAACGCAATAAGCAGATTAGTCTTCCTGGTAAAACAGGCAAAGTGATTCGT
AAAGATGATCCAAACAAGGTATCTCATATGAATAATTTGACTAGCCTTGCACGAACGAAG
AAAGTGCAACCAAGTCATCAAAGTTTTCCAAACAAAGCATCTCAACTTAGAAAATCGGCT
AGTCTTAAACGAGGCAAGATGGAGCTAGGAAGTAACAGGAGTGTTCCAAAGGGGACATTG
TATATCAGAGAATCAAAGACAAAAATCCAGACCATACAGATCTCTCTGGAAAATCGGAAG
GCCAGAGTCTCGCCTTTAGATAGGCATGGCCCAATAAGAGGAAAGAAACCGTCACCCCAT
ATTTCCCCATCATCTTCTCTACATTCTGATGGCAGTAGCTCCAGAAAACATGGCAACAGG
AAATCCTCCCTATCATCAACTTCCGCATGCGAGTCTGTTAATGGTGATGCAATATTCAGC
AGTTCCAAGAAAAGTGGAACCACAAGCCCAAACCAAGATATAAAAGCTGGAAGGGCTGCA
ATTTGCAGTCCTAAAAATCTCAAGTTCAGGAGAGGAAAAATAATTGATTATCAGTCTGAG
AAACTCAGCCCAAGGAGACTAAAATTCAGGCCACCCAAAATACTAGAGAACAACGGGAAT
GGAAGTGATCTTGTTAGAGGAAGAAGCTCTAGGAGATTTATTGCTTATGGAAAGTCAAAT
GCTGCTAAAGATGAAACTATGAGAGTTAATCTTCGACACCAATCTAGACGAGACAAAAAA
GAGGCTCCAATCTTGTTCAACAATGTGATCGAAGAGACTGCAACCAAGCTTGAGGAGACC
AGGAGAAGCAAGGTCCAGGCTTTGGTGGGTGCTTTTGAAACTGTAATCTCCCTTCAGGAT
CCAACATCCACACCGCCAATTATTTCCAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400042681
PEP Infomation

pacid=37459521 transcript=PGSC0003DMT400063387 locus=PGSC0003DMG400024656 ID=PGSC0003DMT400063387.v4.03 annot-version=v4.03
Sequence

MAEMVVGIPAHLERIERDARFLRRNSTGSFGFQIAKSKVLSRYLSDPKGSCHDACKGAER
DDQTTIARTSLLSRTVVASEKIPELTTTVQVQIRKKPLRSSKLPVNFKRRTTGKSQRQEI
PAYAKRLAVSVKQRNGLKMKSLQENANSMSGIYKLRIRGYSDTIIPGGSSIAQNSPLDGA
TGTPNKGSRMDKNTGSSKLGNKKVVGKPANLEKIEHELSYLRRNSTGNLGIEMGDSKVLP
RHVSVPTGSSDANKDGAELNCKTKARTHMSKTSVTSSGENSKLATTVKWQIRKKPLHSTK
LPANIRRLKTSHGKEIQACTKKLAVSARHRSDLKLKPLGENDYSVSRSNKLSRRRYSDSL
MTGVSLTLKGSILDDATTKTNTGSRMDKDTASYELSKKNDVGMPVNLDKIESGVGYLRRN
STGSSGIEIGESKVLSCSPSVPTGSRQEVRKYTVASDLKKKVRTLQRTRPVAASGEIPEM
ARTVKLQIGKKPLSSTKLPNFKSQTTFRTQGKKIPASTKIAVEKGSSGLSKKKDAITISH
STRISVKRVSGKKLNNNSPGMVSQRNKQISLPGKTGKVIRKDDPNKVSHMNNLTSLARTK
KVQPSHQSFPNKASQLRKSASLKRGKMELGSNRSVPKGTLYIRESKTKIQTIQISLENRK
ARVSPLDRHGPIRGKKPSPHISPSSSLHSDGSSSRKHGNRKSSLSSTSACESVNGDAIFS
SSKKSGTTSPNQDIKAGRAAICSPKNLKFRRGKIIDYQSEKLSPRRLKFRPPKILENNGN
GSDLVRGRSSRRFIAYGKSNAAKDETMRVNLRHQSRRDKKEAPILFNNVIEETATKLEET
RRSKVQALVGAFETVISLQDPTSTPPIISR*

Transcript Sequence

Transcript ID

PGSC0003DMT400063387
Transcript Infomation

pacid=37459521 locus=PGSC0003DMG400024656 ID=PGSC0003DMT400063387.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGATGGTTGTTGGCATACCTGCACATCTGGAGAGAATTGAGCGTGATGCTCGC
TTTTTGAGAAGGAACTCAACTGGCAGCTTTGGCTTTCAAATTGCTAAATCCAAGGTCTTG
TCACGTTACCTGAGCGATCCAAAAGGTTCTTGCCATGACGCTTGCAAAGGTGCTGAACGT
GATGATCAAACAACAATAGCAAGGACTTCCCTGCTGAGTAGAACAGTAGTAGCATCAGAA
AAAATACCAGAATTGACTACAACTGTACAGGTGCAGATAAGGAAGAAACCACTACGCTCG
AGTAAGCTACCTGTGAATTTCAAGAGGCGTACAACTGGTAAATCCCAGAGACAGGAGATC
CCAGCATACGCCAAAAGATTAGCTGTTTCTGTAAAACAACGGAACGGTTTGAAGATGAAG
TCGTTGCAGGAAAATGCTAATTCTATGTCCGGAATCTATAAGCTGAGGATAAGAGGATAC
AGCGACACTATCATACCAGGGGGATCATCAATTGCTCAGAATTCTCCGTTGGATGGTGCA
ACCGGCACACCAAACAAAGGAAGCAGGATGGACAAGAACACTGGGTCTTCTAAGTTGGGC
AACAAGAAGGTTGTCGGAAAACCTGCAAACTTGGAGAAAATTGAGCATGAACTCAGTTAT
TTGAGAAGGAACTCAACTGGCAATTTAGGTATTGAAATGGGTGACTCCAAGGTCTTGCCA
CGTCATGTGAGTGTTCCAACAGGTTCTTCTGACGCTAACAAAGATGGTGCGGAACTCAAC
TGTAAAACAAAGGCGAGGACTCACATGTCCAAAACATCTGTAACTTCATCAGGAGAAAAT
TCAAAATTGGCTACAACTGTGAAGTGGCAGATACGGAAGAAACCACTACACTCAACTAAA
CTACCTGCAAATATCAGAAGGCTGAAAACTTCCCATGGAAAGGAAATACAAGCATGCACC
AAAAAATTAGCCGTTTCTGCAAGGCATCGAAGTGATTTGAAGCTGAAGCCTCTTGGAGAA
AATGATTATTCTGTGTCAAGAAGCAACAAACTAAGCAGAAGAAGATACAGTGACAGTCTT
ATGACAGGGGTTTCGCTCACACTTAAGGGGTCTATATTGGATGATGCAACCACCAAAACA
AACACAGGAAGCAGGATGGATAAAGACACTGCATCTTATGAGTTGAGCAAGAAAAACGAT
GTTGGCATGCCAGTGAACCTGGACAAAATTGAGTCCGGAGTCGGCTATTTGAGAAGGAAC
TCAACTGGAAGCTCAGGTATTGAAATAGGTGAATCCAAGGTCTTGTCATGTTCTCCGAGT
GTTCCAACAGGTTCTCGCCAAGAAGTTCGCAAATACACAGTTGCAAGTGATCTTAAAAAG
AAGGTGAGGACTCTCCAGCGCACAAGACCTGTAGCAGCATCAGGAGAAATCCCAGAAATG
GCTAGAACTGTGAAGTTGCAGATAGGGAAGAAACCATTAAGCTCAACCAAGCTCCCAAAT
TTCAAGAGCCAGACAACTTTTCGAACCCAGGGAAAGAAAATCCCAGCATCCACCAAAATA
GCAGTCGAAAAAGGATCCTCCGGGTTGAGCAAGAAGAAGGATGCCATAACTATTTCCCAC
TCTACAAGAATTTCTGTGAAGAGGGTATCAGGCAAAAAGTTAAATAACAATTCCCCCGGA
ATGGTATCTCAACGCAATAAGCAGATTAGTCTTCCTGGTAAAACAGGCAAAGTGATTCGT
AAAGATGATCCAAACAAGGTATCTCATATGAATAATTTGACTAGCCTTGCACGAACGAAG
AAAGTGCAACCAAGTCATCAAAGTTTTCCAAACAAAGCATCTCAACTTAGAAAATCGGCT
AGTCTTAAACGAGGCAAGATGGAGCTAGGAAGTAACAGGAGTGTTCCAAAGGGGACATTG
TATATCAGAGAATCAAAGACAAAAATCCAGACCATACAGATCTCTCTGGAAAATCGGAAG
GCCAGAGTCTCGCCTTTAGATAGGCATGGCCCAATAAGAGGAAAGAAACCGTCACCCCAT
ATTTCCCCATCATCTTCTCTACATTCTGATGGCAGTAGCTCCAGAAAACATGGCAACAGG
AAATCCTCCCTATCATCAACTTCCGCATGCGAGTCTGTTAATGGTGATGCAATATTCAGC
AGTTCCAAGAAAAGTGGAACCACAAGCCCAAACCAAGATATAAAAGCTGGAAGGGCTGCA
ATTTGCAGTCCTAAAAATCTCAAGTTCAGGAGAGGAAAAATAATTGATTATCAGTCTGAG
AAACTCAGCCCAAGGAGACTAAAATTCAGGCCACCCAAAATACTAGAGAACAACGGGAAT
GGAAGTGATCTTGTTAGAGGAAGAAGCTCTAGGAGATTTATTGCTTATGGAAAGTCAAAT
GCTGCTAAAGATGAAACTATGAGAGTTAATCTTCGACACCAATCTAGACGAGACAAAAAA
GAGGCTCCAATCTTGTTCAACAATGTGATCGAAGAGACTGCAACCAAGCTTGAGGAGACC
AGGAGAAGCAAGGTCCAGGCTTTGGTGGGTGCTTTTGAAACTGTAATCTCCCTTCAGGAT
CCAACATCCACACCGCCAATTATTTCCAGATGA