Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063352
CDS Infomation

pacid=37463451 polypeptide=PGSC0003DMP400042657 locus=PGSC0003DMG400024644 ID=PGSC0003DMT400063352.v4.03 annot-version=v4.03
Sequence

ATGAATCCTGAAAAATTTACTCACAAGACAAATGAGGCTATTGCTGAGGCACATGAACTG
GCTGTGTCAGCAGGCCATGCTCAGTTGACACCTCTGCATATGGCTTTGGCTTTATTATCT
GATCACAGTGGTATTTTCTGGCAAGCAATTGTCAATGCTGCTGGTAGTGAAGAGACAGCT
AATGGTGTTGAAAGGGTGTTCAATCAAGCTAAGAAGAAAATTCCTTCTCAGTCACCAGCA
CCTGATCAAGTTCCAGCAAGTACTTCACTTATTAAGGTGCTGCGACGAGCACAATCGTTG
CAGAAGTCTCGTGGTGACAGCCATTTGGCGGTTGATCTGTTGATTTTAGGCCTTTTGGAA
GATTCCCAAATTGTTGATCTTTTGAAAGACTCTGGTCTTAGTGCAGCAAGAGTGAAATCA
GAAGTTGAGAAACTTAGAGGAAAGGATGGAAAGAAAGTGGAAAGTGCTACAGGGGATACC
ACATTCCAAGCACTTAAGACCTACGGTCGTGATCTTGTGGAACAAGCAGGAAAACTTGAT
CCTGTGATTGGTAGGGATGAAGAAATCCGAAGAGTAATTCGGATTCTATCGAGGAGGACA
AAGAACAATCCGGTGCTTATTGGTGAGCCTGGTGTTGGTAAAACAGCTGTAGTTGAAGGG
CTAGCACAAAGGATTGTTCGAGGTGATGTCCCGAGTAACTTGGCTGATGTTAGGCTTATA
GCATTGGATATGGGAGCACTCGTTGCTGGAGCGAAGTACAGAGGTGAATTTGAAGAGAGG
TTGAAGGCTGTTCTGAAGGAAGTGGAAGACGCAGACGGGAAAGTAATTCTCTTCATCGAT
GAGATACACTTGGTTTTAGGTGCTGGTAGGACTGAAGGATCAATGGATGCTGCCAATTTG
TTCAAGCCAATGCTTGCTAGGGGCCAATTAAGGTGCATTGGTGCAACAACTCTGGAAGAG
TACAGGAAGTATGTGGAGAAAGATGCTGCATTCGAAAGGCGTTTCCAGCAGGTATACGTC
GCTGAGCCTAGCGTTCCCGACACTATAAGTATCCTTCGAGGGTTGAAGGAGAAGTATGAA
GGCCATCATGGTGTCAAAATTCAGGATAGGGCTCTTGTTATTGCAGCCCAGCTTTCGGCT
CGATACATTACAGGTCGACATTTGCCTGATAAGGCTATTGACTTAGTTGATGAGGCTTGC
GCAAATGTGAGGGTTCAGCTTGATAGTCAGCCAGAAGAAATTGATAATCTTGAAAGGAAG
AGGATTCAGCTAGAAGTTGAACACCATGCTCTTGAAAAGGAAAAAGATAAGGCTAGCAAA
GCTCGACTTGTTGAAGTGAGGAAAGAGCTTGATGATTTGAGGGACAAACTCCAGCCTTTG
ATGATGAGGTATAAGAAAGAGAAGGAACGGATTGATGAGCTTCGAAGGCTTAAGCAAAAG
CGCGATGAACTCACATATGCTTTACAAGAAGCTGAAAGGAGATATGATCTTGCCAGAGCA
GCAGATCTTAGATATGGTGCCATCCAAGAAGTGGAAGCTGCAATAGCTAATCTTGAGAGT
AGCACAGATGAGAGTACAATGTTGACAGAGACTGTTGGACCCGATCAGATTGCGGAAGTA
GTTAGTCGCTGGACTGGTATTCCTGTCTCAAGGCTTGGCCAGAATGAGAAGGAGAAATTG
ATTGGTCTTGCTGATAGATTGCACCAAAGAGTGGTTGGGCAAGATCAAGCAGTTAAAGCT
GTTTCTGAGGCTGTGTTAAGGTCTAGAGCTGGACTAGGAAGGCCACAACAACCAACTGGT
TCATTCCTTTTCTTGGGGCCAACTGGTGTTGGAAAGACTGAGCTTGCGAAAGCTCTCGCT
GAGCAGCTCTTTGATGATGACAAGTTGATGGTCAGAATTGACATGTCCGAATACATGGAA
CAACATTCTGTTGCCCGATTGATTGGTGCTCCACCAGGTTATGTTGGACATGAGGAAGGA
GGACAACTTACCGAAGCTGTAAGGAGGCGCCCTTACAGTGTTGTGCTTTTCGACGAAGTG
GAAAAAGCTCATCCAACTGTGTTTAATGCCTTGCTTCAAGTGTTGGATGATGGAAGATTA
ACTGATGGTCAAGGTCGTACTGTTGATTTCACCAACACTGTGATCATTATGACCTCAAAT
TTGGGAGCGGAGTATCTCTTGTCAGGATTAAGTGGCAAGTGCACCATGGAGAAGGCCCGC
GAAATGGTCATGCAGGAGGTGAGGAAGCAATTTAAGCCTGAGTTACTGAACAGGCTCGAT
GAGATTGTAGTGTTCGATCCTTTATCACACGATCAGTTGAGGCAAGTCTGCCGTCACCAA
CTGAAGGATGTGGCAGGCCGTTTAGCTGAGATGGGTATTGCATTGGGTGTTACTGAGGCC
GCATTAGATGTCATACTAGCACAGAGCTATGATCCGGTGTATGGTGCAAGGCCTATTAGG
AGGTGGTTGGAGAAGAAAGTTGTAACAGAGTTATCAAAGATGCTTGTGAAGGAGGAAATT
GATGAGAACTCGACCGTGTACGTAGATGCCGGACGTGGCGGGAAAGATCTAACTTATAGG
GTGGAGAATAATGGAGGGCTTGTGAATGCTGCTACTGGGAAAAAATCTGATGTACTGATT
CAGCTACCTAATGGGCAAAGGAATGATGCTGCTCAAGCAGTGAAGAAAATGAGGATTGAG
GAAATAGATGACGAAGATGATGAAATGGCAGCAGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042657
PEP Infomation

pacid=37463451 transcript=PGSC0003DMT400063352 locus=PGSC0003DMG400024644 ID=PGSC0003DMT400063352.v4.03 annot-version=v4.03
Sequence

MNPEKFTHKTNEAIAEAHELAVSAGHAQLTPLHMALALLSDHSGIFWQAIVNAAGSEETA
NGVERVFNQAKKKIPSQSPAPDQVPASTSLIKVLRRAQSLQKSRGDSHLAVDLLILGLLE
DSQIVDLLKDSGLSAARVKSEVEKLRGKDGKKVESATGDTTFQALKTYGRDLVEQAGKLD
PVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLI
ALDMGALVAGAKYRGEFEERLKAVLKEVEDADGKVILFIDEIHLVLGAGRTEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYE
GHHGVKIQDRALVIAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
RIQLEVEHHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQK
RDELTYALQEAERRYDLARAADLRYGAIQEVEAAIANLESSTDESTMLTETVGPDQIAEV
VSRWTGIPVSRLGQNEKEKLIGLADRLHQRVVGQDQAVKAVSEAVLRSRAGLGRPQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDDKLMVRIDMSEYMEQHSVARLIGAPPGYVGHEEG
GQLTEAVRRRPYSVVLFDEVEKAHPTVFNALLQVLDDGRLTDGQGRTVDFTNTVIIMTSN
LGAEYLLSGLSGKCTMEKAREMVMQEVRKQFKPELLNRLDEIVVFDPLSHDQLRQVCRHQ
LKDVAGRLAEMGIALGVTEAALDVILAQSYDPVYGARPIRRWLEKKVVTELSKMLVKEEI
DENSTVYVDAGRGGKDLTYRVENNGGLVNAATGKKSDVLIQLPNGQRNDAAQAVKKMRIE
EIDDEDDEMAAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400063352
Transcript Infomation

pacid=37463451 locus=PGSC0003DMG400024644 ID=PGSC0003DMT400063352.v4.03 annot-version=v4.03
Sequence

ATGAATCCTGAAAAATTTACTCACAAGACAAATGAGGCTATTGCTGAGGCACATGAACTG
GCTGTGTCAGCAGGCCATGCTCAGTTGACACCTCTGCATATGGCTTTGGCTTTATTATCT
GATCACAGTGGTATTTTCTGGCAAGCAATTGTCAATGCTGCTGGTAGTGAAGAGACAGCT
AATGGTGTTGAAAGGGTGTTCAATCAAGCTAAGAAGAAAATTCCTTCTCAGTCACCAGCA
CCTGATCAAGTTCCAGCAAGTACTTCACTTATTAAGGTGCTGCGACGAGCACAATCGTTG
CAGAAGTCTCGTGGTGACAGCCATTTGGCGGTTGATCTGTTGATTTTAGGCCTTTTGGAA
GATTCCCAAATTGTTGATCTTTTGAAAGACTCTGGTCTTAGTGCAGCAAGAGTGAAATCA
GAAGTTGAGAAACTTAGAGGAAAGGATGGAAAGAAAGTGGAAAGTGCTACAGGGGATACC
ACATTCCAAGCACTTAAGACCTACGGTCGTGATCTTGTGGAACAAGCAGGAAAACTTGAT
CCTGTGATTGGTAGGGATGAAGAAATCCGAAGAGTAATTCGGATTCTATCGAGGAGGACA
AAGAACAATCCGGTGCTTATTGGTGAGCCTGGTGTTGGTAAAACAGCTGTAGTTGAAGGG
CTAGCACAAAGGATTGTTCGAGGTGATGTCCCGAGTAACTTGGCTGATGTTAGGCTTATA
GCATTGGATATGGGAGCACTCGTTGCTGGAGCGAAGTACAGAGGTGAATTTGAAGAGAGG
TTGAAGGCTGTTCTGAAGGAAGTGGAAGACGCAGACGGGAAAGTAATTCTCTTCATCGAT
GAGATACACTTGGTTTTAGGTGCTGGTAGGACTGAAGGATCAATGGATGCTGCCAATTTG
TTCAAGCCAATGCTTGCTAGGGGCCAATTAAGGTGCATTGGTGCAACAACTCTGGAAGAG
TACAGGAAGTATGTGGAGAAAGATGCTGCATTCGAAAGGCGTTTCCAGCAGGTATACGTC
GCTGAGCCTAGCGTTCCCGACACTATAAGTATCCTTCGAGGGTTGAAGGAGAAGTATGAA
GGCCATCATGGTGTCAAAATTCAGGATAGGGCTCTTGTTATTGCAGCCCAGCTTTCGGCT
CGATACATTACAGGTCGACATTTGCCTGATAAGGCTATTGACTTAGTTGATGAGGCTTGC
GCAAATGTGAGGGTTCAGCTTGATAGTCAGCCAGAAGAAATTGATAATCTTGAAAGGAAG
AGGATTCAGCTAGAAGTTGAACACCATGCTCTTGAAAAGGAAAAAGATAAGGCTAGCAAA
GCTCGACTTGTTGAAGTGAGGAAAGAGCTTGATGATTTGAGGGACAAACTCCAGCCTTTG
ATGATGAGGTATAAGAAAGAGAAGGAACGGATTGATGAGCTTCGAAGGCTTAAGCAAAAG
CGCGATGAACTCACATATGCTTTACAAGAAGCTGAAAGGAGATATGATCTTGCCAGAGCA
GCAGATCTTAGATATGGTGCCATCCAAGAAGTGGAAGCTGCAATAGCTAATCTTGAGAGT
AGCACAGATGAGAGTACAATGTTGACAGAGACTGTTGGACCCGATCAGATTGCGGAAGTA
GTTAGTCGCTGGACTGGTATTCCTGTCTCAAGGCTTGGCCAGAATGAGAAGGAGAAATTG
ATTGGTCTTGCTGATAGATTGCACCAAAGAGTGGTTGGGCAAGATCAAGCAGTTAAAGCT
GTTTCTGAGGCTGTGTTAAGGTCTAGAGCTGGACTAGGAAGGCCACAACAACCAACTGGT
TCATTCCTTTTCTTGGGGCCAACTGGTGTTGGAAAGACTGAGCTTGCGAAAGCTCTCGCT
GAGCAGCTCTTTGATGATGACAAGTTGATGGTCAGAATTGACATGTCCGAATACATGGAA
CAACATTCTGTTGCCCGATTGATTGGTGCTCCACCAGGTTATGTTGGACATGAGGAAGGA
GGACAACTTACCGAAGCTGTAAGGAGGCGCCCTTACAGTGTTGTGCTTTTCGACGAAGTG
GAAAAAGCTCATCCAACTGTGTTTAATGCCTTGCTTCAAGTGTTGGATGATGGAAGATTA
ACTGATGGTCAAGGTCGTACTGTTGATTTCACCAACACTGTGATCATTATGACCTCAAAT
TTGGGAGCGGAGTATCTCTTGTCAGGATTAAGTGGCAAGTGCACCATGGAGAAGGCCCGC
GAAATGGTCATGCAGGAGGTGAGGAAGCAATTTAAGCCTGAGTTACTGAACAGGCTCGAT
GAGATTGTAGTGTTCGATCCTTTATCACACGATCAGTTGAGGCAAGTCTGCCGTCACCAA
CTGAAGGATGTGGCAGGCCGTTTAGCTGAGATGGGTATTGCATTGGGTGTTACTGAGGCC
GCATTAGATGTCATACTAGCACAGAGCTATGATCCGGTGTATGGTGCAAGGCCTATTAGG
AGGTGGTTGGAGAAGAAAGTTGTAACAGAGTTATCAAAGATGCTTGTGAAGGAGGAAATT
GATGAGAACTCGACCGTGTACGTAGATGCCGGACGTGGCGGGAAAGATCTAACTTATAGG
GTGGAGAATAATGGAGGGCTTGTGAATGCTGCTACTGGGAAAAAATCTGATGTACTGATT
CAGCTACCTAATGGGCAAAGGAATGATGCTGCTCAAGCAGTGAAGAAAATGAGGATTGAG
GAAATAGATGACGAAGATGATGAAATGGCAGCAGATTAA