Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063335
CDS Infomation

pacid=37463052 polypeptide=PGSC0003DMP400042646 locus=PGSC0003DMG400024637 ID=PGSC0003DMT400063335.v4.03 annot-version=v4.03
Sequence

ATGGATATTTGGGTTGTGGCTGCAGCTGCTGGTGCTGGGTATGTAGCCCAGCATTGGAAG
AACCTCTTAAGAAGCCGGCATGAGTTGTTAGAATCATCTCCTGGGAGTCCTAGTTTTGTA
AGAAATGATTCATTAACGCGTATGCATCAAGTCTTGGATAAGAATTGTTCCTCTCCTGTG
GAGACACCGAGAAAGAAACTAGATGAGTGTGCTGCAGAAAGATTGGCTTTCCATGATCCA
GAAGTGGCTTGCACCAGCAGTTTGGCTGATGAAAGATTAGGGATGTTGTGTGATTCTGAT
AATTTTCATTTGAACTCTGGGTTGCCGTGTGATAAAGAACTTCAAGGAGATCAGGGTGGA
AGCATATGTGGTAACATCAATGAACTGGGATATGAGTCATCACTTCCCCCTTCTACGGCT
GAATTGGCGTTTTCTTATGGTACTTCAAGGAAAAAGAGCAACCTTAGGAGTAGAAGAAAA
ATTGGGCATCTTATAAAGCCTCTGAATTCTCTTGAAAGTTGTCTCATGGCTCAATTATAC
AAGGAACATGGTGATGTTGAAGACCATATTTTCAGTTCAAACACTTCACCATGGACTCCA
ACTGTGAGGCCTTTTGTAGTTACTGACGGGAGCAAAATTATAAGCATTGCTAGTTCTAAT
TCTATTAATGCCCCAAGAAGTGCTGGACATCATAAGCAGCAGGATAATTTTTCACAAATG
AATACTGTATTTGGAGTCCCTCAACTACCTAGTGTTGGATCCGTGGAGCTCCTCAGGAAA
GACAAGGTGAAGGATCAGTCCGGCAGATTTAGTGATTCCATTGGAATGAACAATGAGAGA
CACAGCAGTTTACAAGGATCATCTCATCGTGTGCTTCTTTTCTGTCTTGGAATATCTGTG
GGTATGATATCCTCTTTCTGGAAAAATAGAAAGGAAATGGATAAGTTAAATGAGTTGCTG
AGACGGTCGGAGAATTTGGTTCAAGATCTACATGAGGAACTTGAAATGAAAGAATTAATT
ACTGTGAAAGAGCTTGCCACTGAAGATTGTGGGTCACAAGATGCACATAATGATTCATCA
AACAATGGAGCTTTACTGGCACCTTCCCCTAAAGGAAAGATGGATAAGTCGTCAACAAAT
TACGATGAAGATTGTCAAAGCCAGAGAACAGAGGAAGAATCTAGGAGTAAAATTGAAGCA
GAGCTTGAAGCTGAATTGGAGATGTTAGAATTAAGTATGAACTCGTCTAAATTGGAGGGG
AAACTAGCAGAGCTACATGAGCTTGATCCAGATTTTGTGACAGATCTAGCCAAGGGGGAG
TTAAGAACTGAACTCTTTAATAGACAAGCCGGAGGTCAACCTTATGCAGATCAGGATGGT
AGCGGGACCTCAACTCATCATCCTGCTAACTATGCCGTCTCATCTAGAGAGCTGACTTTG
CGGCTGCACGAAGTCCTCCAATCACAATTAGAAGGCCGGGTCAAGGAGCTTGAGATGGCA
CTTCAGAACAGTGAAAGGAAAGTTCGTTATATGGAAGCAGAACTTGTAAGTTCTTGGAGG
GACTCCTCAAACAGTGAAGAGGGTTCTTCTTCCACCCATGGTAGTCCTGTAACTAAAGTT
GAACAACGTACAGCAGACCAGCCAATGACAATCAATTTACGCGGGGATGCTTTAGATGCA
TATAACGAGGCTTATAACGTGTTCACAAGGTTAAATTCAAAGAAGGAGGATGTTGCTGTT
GCATCAGGAGTTATGGACATCAACCACCAAGAGAACTCGCGTTCACGTGAGCGTAACTTT
GACTGGATTGAAAATGATAGGATGAATGATGAAAGTGATGATGAGATGGAAAAGTTGTTA
ATTAGACATATTGTGGAGAAGGCAAAGAAAGGCTCTCCAGCAGTTTTAAACGTGCAGAGA
GCATTGTTCTCCCTTGATGATAATGAACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042646
PEP Infomation

pacid=37463052 transcript=PGSC0003DMT400063335 locus=PGSC0003DMG400024637 ID=PGSC0003DMT400063335.v4.03 annot-version=v4.03
Sequence

MDIWVVAAAAGAGYVAQHWKNLLRSRHELLESSPGSPSFVRNDSLTRMHQVLDKNCSSPV
ETPRKKLDECAAERLAFHDPEVACTSSLADERLGMLCDSDNFHLNSGLPCDKELQGDQGG
SICGNINELGYESSLPPSTAELAFSYGTSRKKSNLRSRRKIGHLIKPLNSLESCLMAQLY
KEHGDVEDHIFSSNTSPWTPTVRPFVVTDGSKIISIASSNSINAPRSAGHHKQQDNFSQM
NTVFGVPQLPSVGSVELLRKDKVKDQSGRFSDSIGMNNERHSSLQGSSHRVLLFCLGISV
GMISSFWKNRKEMDKLNELLRRSENLVQDLHEELEMKELITVKELATEDCGSQDAHNDSS
NNGALLAPSPKGKMDKSSTNYDEDCQSQRTEEESRSKIEAELEAELEMLELSMNSSKLEG
KLAELHELDPDFVTDLAKGELRTELFNRQAGGQPYADQDGSGTSTHHPANYAVSSRELTL
RLHEVLQSQLEGRVKELEMALQNSERKVRYMEAELVSSWRDSSNSEEGSSSTHGSPVTKV
EQRTADQPMTINLRGDALDAYNEAYNVFTRLNSKKEDVAVASGVMDINHQENSRSRERNF
DWIENDRMNDESDDEMEKLLIRHIVEKAKKGSPAVLNVQRALFSLDDNEH*

Transcript Sequence

Transcript ID

PGSC0003DMT400063335
Transcript Infomation

pacid=37463052 locus=PGSC0003DMG400024637 ID=PGSC0003DMT400063335.v4.03 annot-version=v4.03
Sequence

ATGGATATTTGGGTTGTGGCTGCAGCTGCTGGTGCTGGGTATGTAGCCCAGCATTGGAAG
AACCTCTTAAGAAGCCGGCATGAGTTGTTAGAATCATCTCCTGGGAGTCCTAGTTTTGTA
AGAAATGATTCATTAACGCGTATGCATCAAGTCTTGGATAAGAATTGTTCCTCTCCTGTG
GAGACACCGAGAAAGAAACTAGATGAGTGTGCTGCAGAAAGATTGGCTTTCCATGATCCA
GAAGTGGCTTGCACCAGCAGTTTGGCTGATGAAAGATTAGGGATGTTGTGTGATTCTGAT
AATTTTCATTTGAACTCTGGGTTGCCGTGTGATAAAGAACTTCAAGGAGATCAGGGTGGA
AGCATATGTGGTAACATCAATGAACTGGGATATGAGTCATCACTTCCCCCTTCTACGGCT
GAATTGGCGTTTTCTTATGGTACTTCAAGGAAAAAGAGCAACCTTAGGAGTAGAAGAAAA
ATTGGGCATCTTATAAAGCCTCTGAATTCTCTTGAAAGTTGTCTCATGGCTCAATTATAC
AAGGAACATGGTGATGTTGAAGACCATATTTTCAGTTCAAACACTTCACCATGGACTCCA
ACTGTGAGGCCTTTTGTAGTTACTGACGGGAGCAAAATTATAAGCATTGCTAGTTCTAAT
TCTATTAATGCCCCAAGAAGTGCTGGACATCATAAGCAGCAGGATAATTTTTCACAAATG
AATACTGTATTTGGAGTCCCTCAACTACCTAGTGTTGGATCCGTGGAGCTCCTCAGGAAA
GACAAGGTGAAGGATCAGTCCGGCAGATTTAGTGATTCCATTGGAATGAACAATGAGAGA
CACAGCAGTTTACAAGGATCATCTCATCGTGTGCTTCTTTTCTGTCTTGGAATATCTGTG
GGTATGATATCCTCTTTCTGGAAAAATAGAAAGGAAATGGATAAGTTAAATGAGTTGCTG
AGACGGTCGGAGAATTTGGTTCAAGATCTACATGAGGAACTTGAAATGAAAGAATTAATT
ACTGTGAAAGAGCTTGCCACTGAAGATTGTGGGTCACAAGATGCACATAATGATTCATCA
AACAATGGAGCTTTACTGGCACCTTCCCCTAAAGGAAAGATGGATAAGTCGTCAACAAAT
TACGATGAAGATTGTCAAAGCCAGAGAACAGAGGAAGAATCTAGGAGTAAAATTGAAGCA
GAGCTTGAAGCTGAATTGGAGATGTTAGAATTAAGTATGAACTCGTCTAAATTGGAGGGG
AAACTAGCAGAGCTACATGAGCTTGATCCAGATTTTGTGACAGATCTAGCCAAGGGGGAG
TTAAGAACTGAACTCTTTAATAGACAAGCCGGAGGTCAACCTTATGCAGATCAGGATGGT
AGCGGGACCTCAACTCATCATCCTGCTAACTATGCCGTCTCATCTAGAGAGCTGACTTTG
CGGCTGCACGAAGTCCTCCAATCACAATTAGAAGGCCGGGTCAAGGAGCTTGAGATGGCA
CTTCAGAACAGTGAAAGGAAAGTTCGTTATATGGAAGCAGAACTTGTAAGTTCTTGGAGG
GACTCCTCAAACAGTGAAGAGGGTTCTTCTTCCACCCATGGTAGTCCTGTAACTAAAGTT
GAACAACGTACAGCAGACCAGCCAATGACAATCAATTTACGCGGGGATGCTTTAGATGCA
TATAACGAGGCTTATAACGTGTTCACAAGGTTAAATTCAAAGAAGGAGGATGTTGCTGTT
GCATCAGGAGTTATGGACATCAACCACCAAGAGAACTCGCGTTCACGTGAGCGTAACTTT
GACTGGATTGAAAATGATAGGATGAATGATGAAAGTGATGATGAGATGGAAAAGTTGTTA
ATTAGACATATTGTGGAGAAGGCAAAGAAAGGCTCTCCAGCAGTTTTAAACGTGCAGAGA
GCATTGTTCTCCCTTGATGATAATGAACATTGA