Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063329
CDS Infomation

pacid=37463754 polypeptide=PGSC0003DMP400042640 locus=PGSC0003DMG400024634 ID=PGSC0003DMT400063329.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAACGGTCAGCCCAGATGCTATTTCAACTATTTTAGCGAACCCATCGCCGGAT
TCTTCTTCAGATCTTCCTGAAATTATTGTTCAAGTAGTGGATCTCAAGCCCACCGGCAAC
AGATACATGTTTTCAGCCAATGATGGGAAAATGAAGATTAAGGGCATTCTTCAATCTAGT
TTGTCTTCTGAAGTTATATCTGGGTCTATACAGAACCTGGGTCTTATTCGGATTATTGAT
TACACCCTCAATGATATCCCAACTAAGAATGAAAAGTACTTGATTGTAACTAAATGTGAG
TCAGTGTCTCCTGCTCTTGAAGCTGAGTACAAGGCTGAAGTGAAAAGTGAAGACACTGGC
ATTGTCTTGAAGCCAAAGCAGGAAGAGACTGGGATTCTTTTGAAACCAAAACAGGAATAT
CAAACTAAATCTGCTGCTCAAATTGTACATGAACAAAGTGGAAACATGGCACCGTCTGCT
CGAATGGCAATGACAAGAAGAATTCAGCCACTTGTCTCTTTGAATCCCTACCAAGGAAAT
TGGACCATTAAGGTTCGAGTAACTAGCAAGGGTAATATGCGAACTTACAAGAATGCTCGT
GGAGAAGGCTGTGTGTTCAATGTTGAATTGACTGATGAGGATGGTACCCAAATACAAGCT
ACAATGTTTAATGAAGCTGCAAAGAAGTTTTTTGACAAGTTTGAATTGGGGAAAGTATAT
TACATTTCAAAGGGAACTCTTCGAGTTGCGAACAAGCAGTTCAAAACTGTACAAAATGAT
TATGAGATGACTTTGAATGAAACTTCCCAAGTTGAGGAGGCTTGCAACGAAGAAGCTTTT
ATTCCAGAGACAAAATTTAACTTTGTCCCAATTGATGAATTGGGACCATATGTCAATGGC
AGGGAGCTTGTTGATGTTATTGGGGTGGTCCAAAGTGTATCTCCAACAATGAGCATACGG
AGGAAGAGTAACAATGAGACAGTCCCTAAGCGTGATATAACTATTGCAGATGAGACGAAG
AAGACTGTTGTTGTTTCTCTTTGGAATGATCTTGCCACCCATGTTGGACAAGAACTGCTA
GACATGGCTGATAAATCCCCAGTTGTTGCAATCAAATCCCTTAAAGTTGGAGACTTCCAA
GGAGTGTCTTTATCAGCATTAAGCAAAAGCAATATTGTTGTGAATCCTGATTTACCTGAA
GCCAAAAAATTGAGATCTTGGTATGATTCTGAAGGTAAAGAAACTTCATTGGCATCTATT
GGTTCTGGCATGAGCCCCTCTGCCAAGAGTGGAGCAAGATCTATGTATACTGATAGAGTT
TCCTTGCTTCATATAACCAGTAACCTGTCCCTTGGCGAGGAGAAGCCTGTGTTTTTCAGC
TTGAAAGCATATATAAGTTTCATTAAGCCTGATCAAACCATGTGGTATCGGGCTTGCAAG
ACATGCAACAAGAAAGTTACTGAAGCTTTTGGGTCTGGATATTGGTGTGAAGGATGCCAG
AAGAATGAAGCAGAGTGTAGTTTGAGATATATAATGGCATTGAAAGTGTCTGATGCAAGT
GGTGAAGCATGGCTTTCTACGTTTAATGAGCAAGCAGAGAAAATACTTGGATGCTCTGCT
GATGAACTTGACAAGCTGAAATCAGAGGAGGGAGAAATTGCATATCAAATGAAATTGAAG
GAAGCTACATGGGTTCCTCACCTTTTCCGGGTCAGTGTTGCACCACAAGAGTACAACAAC
GAGAAAAGGCAAAGGATAACAGTCAGGGCTATTGCTCCAGTTGATTATGCAGCAGAATCC
AAATACTTGCTGGAAGAAATGTCTAAGATGAACATTGCTATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042640
PEP Infomation

pacid=37463754 transcript=PGSC0003DMT400063329 locus=PGSC0003DMG400024634 ID=PGSC0003DMT400063329.v4.03 annot-version=v4.03
Sequence

MAKTVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGNRYMFSANDGKMKIKGILQSS
LSSEVISGSIQNLGLIRIIDYTLNDIPTKNEKYLIVTKCESVSPALEAEYKAEVKSEDTG
IVLKPKQEETGILLKPKQEYQTKSAAQIVHEQSGNMAPSARMAMTRRIQPLVSLNPYQGN
WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFFDKFELGKVY
YISKGTLRVANKQFKTVQNDYEMTLNETSQVEEACNEEAFIPETKFNFVPIDELGPYVNG
RELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKTVVVSLWNDLATHVGQELL
DMADKSPVVAIKSLKVGDFQGVSLSALSKSNIVVNPDLPEAKKLRSWYDSEGKETSLASI
GSGMSPSAKSGARSMYTDRVSLLHITSNLSLGEEKPVFFSLKAYISFIKPDQTMWYRACK
TCNKKVTEAFGSGYWCEGCQKNEAECSLRYIMALKVSDASGEAWLSTFNEQAEKILGCSA
DELDKLKSEEGEIAYQMKLKEATWVPHLFRVSVAPQEYNNEKRQRITVRAIAPVDYAAES
KYLLEEMSKMNIAM*

Transcript Sequence

Transcript ID

PGSC0003DMT400063329
Transcript Infomation

pacid=37463754 locus=PGSC0003DMG400024634 ID=PGSC0003DMT400063329.v4.03 annot-version=v4.03
Sequence

ATGGCAAAAACGGTCAGCCCAGATGCTATTTCAACTATTTTAGCGAACCCATCGCCGGAT
TCTTCTTCAGATCTTCCTGAAATTATTGTTCAAGTAGTGGATCTCAAGCCCACCGGCAAC
AGATACATGTTTTCAGCCAATGATGGGAAAATGAAGATTAAGGGCATTCTTCAATCTAGT
TTGTCTTCTGAAGTTATATCTGGGTCTATACAGAACCTGGGTCTTATTCGGATTATTGAT
TACACCCTCAATGATATCCCAACTAAGAATGAAAAGTACTTGATTGTAACTAAATGTGAG
TCAGTGTCTCCTGCTCTTGAAGCTGAGTACAAGGCTGAAGTGAAAAGTGAAGACACTGGC
ATTGTCTTGAAGCCAAAGCAGGAAGAGACTGGGATTCTTTTGAAACCAAAACAGGAATAT
CAAACTAAATCTGCTGCTCAAATTGTACATGAACAAAGTGGAAACATGGCACCGTCTGCT
CGAATGGCAATGACAAGAAGAATTCAGCCACTTGTCTCTTTGAATCCCTACCAAGGAAAT
TGGACCATTAAGGTTCGAGTAACTAGCAAGGGTAATATGCGAACTTACAAGAATGCTCGT
GGAGAAGGCTGTGTGTTCAATGTTGAATTGACTGATGAGGATGGTACCCAAATACAAGCT
ACAATGTTTAATGAAGCTGCAAAGAAGTTTTTTGACAAGTTTGAATTGGGGAAAGTATAT
TACATTTCAAAGGGAACTCTTCGAGTTGCGAACAAGCAGTTCAAAACTGTACAAAATGAT
TATGAGATGACTTTGAATGAAACTTCCCAAGTTGAGGAGGCTTGCAACGAAGAAGCTTTT
ATTCCAGAGACAAAATTTAACTTTGTCCCAATTGATGAATTGGGACCATATGTCAATGGC
AGGGAGCTTGTTGATGTTATTGGGGTGGTCCAAAGTGTATCTCCAACAATGAGCATACGG
AGGAAGAGTAACAATGAGACAGTCCCTAAGCGTGATATAACTATTGCAGATGAGACGAAG
AAGACTGTTGTTGTTTCTCTTTGGAATGATCTTGCCACCCATGTTGGACAAGAACTGCTA
GACATGGCTGATAAATCCCCAGTTGTTGCAATCAAATCCCTTAAAGTTGGAGACTTCCAA
GGAGTGTCTTTATCAGCATTAAGCAAAAGCAATATTGTTGTGAATCCTGATTTACCTGAA
GCCAAAAAATTGAGATCTTGGTATGATTCTGAAGGTAAAGAAACTTCATTGGCATCTATT
GGTTCTGGCATGAGCCCCTCTGCCAAGAGTGGAGCAAGATCTATGTATACTGATAGAGTT
TCCTTGCTTCATATAACCAGTAACCTGTCCCTTGGCGAGGAGAAGCCTGTGTTTTTCAGC
TTGAAAGCATATATAAGTTTCATTAAGCCTGATCAAACCATGTGGTATCGGGCTTGCAAG
ACATGCAACAAGAAAGTTACTGAAGCTTTTGGGTCTGGATATTGGTGTGAAGGATGCCAG
AAGAATGAAGCAGAGTGTAGTTTGAGATATATAATGGCATTGAAAGTGTCTGATGCAAGT
GGTGAAGCATGGCTTTCTACGTTTAATGAGCAAGCAGAGAAAATACTTGGATGCTCTGCT
GATGAACTTGACAAGCTGAAATCAGAGGAGGGAGAAATTGCATATCAAATGAAATTGAAG
GAAGCTACATGGGTTCCTCACCTTTTCCGGGTCAGTGTTGCACCACAAGAGTACAACAAC
GAGAAAAGGCAAAGGATAACAGTCAGGGCTATTGCTCCAGTTGATTATGCAGCAGAATCC
AAATACTTGCTGGAAGAAATGTCTAAGATGAACATTGCTATGTAA