Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063309
CDS Infomation

pacid=37461372 polypeptide=PGSC0003DMP400042625 locus=PGSC0003DMG400024623 ID=PGSC0003DMT400063309.v4.03 annot-version=v4.03
Sequence

ATGCGGCGGCGGGCGGCCGATTATCGGCGCCCGGTTCGAAGGAGGCTATCTTGTTGGATC
TGGTCGCTTCTTGGAATATTCTCAATTGTAGGTTTCGTTTTGTTTGTAGTTCATCATCAT
CATGACCACGAGGATCACGTAGAACAACCTGTTTCGGAAAGAGAGTCTAGGAATGAGCAG
GTTGTGCATGAGCGTATGAATCTCACACAAGAGATGTTAAGTGTTAATTCATATGCCAGA
CAAATAGCAGAGCAAACAACACTAGCCAAAGCTTACATCATTATAGCAAAAGAGCACAAC
AATCTTCATCTTGCATGGGAGCTGAGTACAAAGATAAGAAGTTGTCAACTTTTACTCTCA
AAAGCTGCAATGAGAGATGAGCCCATTTCTCTAGATGAAGCTGAGCCAAACATAAGAAGT
CTATCTTCTCTCATCCTTAAGGCACAGGATGCCCATTACGATATTGCTACCACTATGATG
ACAATGAAATCACATATTCAAGCTCTTGAAGAGCGTGCCAATGCTGCATCTGTTCAAAGT
ATGATGTTCGGACAGTTAACAGCTGAGTCTCTGCCAAAGAAGCTGCACTGCCTAGAAATG
AAGCTCATGGCTGATTGGCTTACAAAAAAGTCATTGCAGGATTTTGCTGATGAGAGGAGA
AACTCACCTCGTTTAGTAGACAATAACCTGTATCACTTCTGCATATTTTCAGATAATCTG
TTGGCAGTTTCAGTAGTTATCAACTCAACTGTGGCCAATGCTGATCACCCTAAGCAGCTA
GTTTTCCATATCGTAACGGATTCAATACACTATGGAGTGATGCTGGCTTGGTTCCTGAAC
AATGACTTCAAAGGTTCTACAGTAGAAGTACAGAATATTGACAACTTCACTTGGTTGAAT
TCATCTTATTCTCCTGCTGTAAAGCAGCTAATGTCCACAGATTCCAGGAAGTATTATTTT
GACGGCTCTGAAGATACTGGTGTCGAGCCAAAGTTCCGGAATCCAAAATATATATATTTG
TTGAATCACCTTCGGTTTTACATCCCTGAGATTTACCCCCAGTTGGAGAAGATTGTTTTC
CTTGATGATGATGTTGTAGTTCAGAAGGATCTGACACCTCTCTTTTCACTGGATTTGCAT
GGAAATGTGAATGGAGCAGTAGAAACTTGTCTTGAAGCTTTTCATCGTTATTACAAGTAT
CTAAATTTTTCAAATCCACTCATCAGCTCTAAGTTTGATCCCCAGGCCTGTGGATGGGCA
TTTGGTATGAATGTTTTTGATTTGATTGCTTGGAGGAAAGCAAGTGTTACTTCCCGATAT
CATTATTGGATAGAACAAAATGCTGATAGGACTATTTGGAAGCTAGGAACCCTTCCACCT
GGACTATTAGCTTTTTATGGAATGACGGAGCCACTTGATCGGAGGTGGCATGTGTTGGGA
TTAGGTTATGACGTGAATGTTGACAATCGCCTGATAGAGAGTGCAGCAGTGATTCACTTC
AATGGAAACATGAAGCCATGGCTTAAGCTACGCATTAACAGGTATAGGCCTTTGTGGGAA
CGATATGTAAATCAAACGCACCCACACCTTCAGGATTGTGCTACACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042625
PEP Infomation

pacid=37461372 transcript=PGSC0003DMT400063309 locus=PGSC0003DMG400024623 ID=PGSC0003DMT400063309.v4.03 annot-version=v4.03
Sequence

MRRRAADYRRPVRRRLSCWIWSLLGIFSIVGFVLFVVHHHHDHEDHVEQPVSERESRNEQ
VVHERMNLTQEMLSVNSYARQIAEQTTLAKAYIIIAKEHNNLHLAWELSTKIRSCQLLLS
KAAMRDEPISLDEAEPNIRSLSSLILKAQDAHYDIATTMMTMKSHIQALEERANAASVQS
MMFGQLTAESLPKKLHCLEMKLMADWLTKKSLQDFADERRNSPRLVDNNLYHFCIFSDNL
LAVSVVINSTVANADHPKQLVFHIVTDSIHYGVMLAWFLNNDFKGSTVEVQNIDNFTWLN
SSYSPAVKQLMSTDSRKYYFDGSEDTGVEPKFRNPKYIYLLNHLRFYIPEIYPQLEKIVF
LDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPLISSKFDPQACGWA
FGMNVFDLIAWRKASVTSRYHYWIEQNADRTIWKLGTLPPGLLAFYGMTEPLDRRWHVLG
LGYDVNVDNRLIESAAVIHFNGNMKPWLKLRINRYRPLWERYVNQTHPHLQDCATH*

Transcript Sequence

Transcript ID

PGSC0003DMT400063309
Transcript Infomation

pacid=37461372 locus=PGSC0003DMG400024623 ID=PGSC0003DMT400063309.v4.03 annot-version=v4.03
Sequence

ATGCGGCGGCGGGCGGCCGATTATCGGCGCCCGGTTCGAAGGAGGCTATCTTGTTGGATC
TGGTCGCTTCTTGGAATATTCTCAATTGTAGGTTTCGTTTTGTTTGTAGTTCATCATCAT
CATGACCACGAGGATCACGTAGAACAACCTGTTTCGGAAAGAGAGTCTAGGAATGAGCAG
GTTGTGCATGAGCGTATGAATCTCACACAAGAGATGTTAAGTGTTAATTCATATGCCAGA
CAAATAGCAGAGCAAACAACACTAGCCAAAGCTTACATCATTATAGCAAAAGAGCACAAC
AATCTTCATCTTGCATGGGAGCTGAGTACAAAGATAAGAAGTTGTCAACTTTTACTCTCA
AAAGCTGCAATGAGAGATGAGCCCATTTCTCTAGATGAAGCTGAGCCAAACATAAGAAGT
CTATCTTCTCTCATCCTTAAGGCACAGGATGCCCATTACGATATTGCTACCACTATGATG
ACAATGAAATCACATATTCAAGCTCTTGAAGAGCGTGCCAATGCTGCATCTGTTCAAAGT
ATGATGTTCGGACAGTTAACAGCTGAGTCTCTGCCAAAGAAGCTGCACTGCCTAGAAATG
AAGCTCATGGCTGATTGGCTTACAAAAAAGTCATTGCAGGATTTTGCTGATGAGAGGAGA
AACTCACCTCGTTTAGTAGACAATAACCTGTATCACTTCTGCATATTTTCAGATAATCTG
TTGGCAGTTTCAGTAGTTATCAACTCAACTGTGGCCAATGCTGATCACCCTAAGCAGCTA
GTTTTCCATATCGTAACGGATTCAATACACTATGGAGTGATGCTGGCTTGGTTCCTGAAC
AATGACTTCAAAGGTTCTACAGTAGAAGTACAGAATATTGACAACTTCACTTGGTTGAAT
TCATCTTATTCTCCTGCTGTAAAGCAGCTAATGTCCACAGATTCCAGGAAGTATTATTTT
GACGGCTCTGAAGATACTGGTGTCGAGCCAAAGTTCCGGAATCCAAAATATATATATTTG
TTGAATCACCTTCGGTTTTACATCCCTGAGATTTACCCCCAGTTGGAGAAGATTGTTTTC
CTTGATGATGATGTTGTAGTTCAGAAGGATCTGACACCTCTCTTTTCACTGGATTTGCAT
GGAAATGTGAATGGAGCAGTAGAAACTTGTCTTGAAGCTTTTCATCGTTATTACAAGTAT
CTAAATTTTTCAAATCCACTCATCAGCTCTAAGTTTGATCCCCAGGCCTGTGGATGGGCA
TTTGGTATGAATGTTTTTGATTTGATTGCTTGGAGGAAAGCAAGTGTTACTTCCCGATAT
CATTATTGGATAGAACAAAATGCTGATAGGACTATTTGGAAGCTAGGAACCCTTCCACCT
GGACTATTAGCTTTTTATGGAATGACGGAGCCACTTGATCGGAGGTGGCATGTGTTGGGA
TTAGGTTATGACGTGAATGTTGACAATCGCCTGATAGAGAGTGCAGCAGTGATTCACTTC
AATGGAAACATGAAGCCATGGCTTAAGCTACGCATTAACAGGTATAGGCCTTTGTGGGAA
CGATATGTAAATCAAACGCACCCACACCTTCAGGATTGTGCTACACATTGA