Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063296
CDS Infomation

pacid=37460068 polypeptide=PGSC0003DMP400042612 locus=PGSC0003DMG400024615 ID=PGSC0003DMT400063296.v4.03 annot-version=v4.03
Sequence

ATGAAGATCAGATCCATTAAGCTTAGAGAAGCTCACAAGAACAGCAATGGCGTCGGGTCA
TTCTGCTCGGTTTTATGGGATCAGCAGGGAGAACACATCGTCACTGCGTCTTCTTCTGAT
TCTTCAATTTGCATTCACGATGCTATTTTGCCAGCTAATCCCCCTAAAGTTGTTCGACAG
CACAGAGATGGCGTCACCGCTTTGGCTCTCAGCCCTAATTACACCTGTCTGGCTTCTGGA
TCTGTTGACCATTCCGTCAAACTCTACAAATTTCCTGCTGGGGAGTTCGATACTAACATT
ACTAGATTTACATTGCCAATACGGGCGCTTGCTTTCAATAAGTCCGGAACTATGCTGGCA
GCTGCTGGTGATGATGAAGGCATCAAACTTATAAATACCATTGATGGCTCGATCGCAAGA
GTTCTTAAAGGACATAGAGGATCCATCACTGGCATAGCTTTTGATCCCAAAAGTGAATAC
CTGGCTTCAGTTGATTCAATAGGGACTGTTATGCTCTGGGAACTCCAGTCTGGGAACACA
ATTCATGTCTTAAAAGGAATAGCTCCTGTCATTGGTTCTGATTTTTCTTCTACGAATATA
GTTAGCTGGAGTCCTGATGGGGATCTATTAGCTGTTCCTGGCTTGAAAAATGATGTGGTG
ATGTACGACAGAGACACTGCAGAAAAACTGTTTTCTCTTAGAGGTGATCATGTACAACCC
ATTTGCTTTTTGTCTTGGTCACCAAATGGAAAGTACATGGCTACTTCTGGACTAGATAGA
CAGGTTTTGATATGGGATGTTGATAAGAAACAAGATATTGATCGGCAGAAATTTGATAAC
AGGATAACTTGTATGGTGTGGAAACCAACTGGCAATGCATTGGCAGTAATTGACATCATG
GGAAAGTATGGGGTTTGGGAATCAGCTGTACCTTCTTCAATGAGATCTCCCACAGAAGAT
ATTCCTGGTTTAAGTTCTAAAAGTGGTCATGGTCTTCTTTTCTATGATGAAGAGGAAGAA
AACCCCAGTGTATCTGGTAGTTTAAGTGATCTCGGAGAAGATAGTCAAGGTGAATCTGAA
CCATTCAGCAGAAAAAGATTACGCAAACAGCATAGTTATACTGATGATTGGGAAGAGGAC
ACAAATGAAGAGTTGGAGTTACTTCCAAAAGTTGAACCTCGTAAGAAGGCTCCTCATGGT
CACAGGGATGGTTCAGATAATAAAAGAAATAAGTTCAAGGATGTGCCAATTTCTACAGGG
GCAAAAATGCAAGAAGCTATTCAGCCAGGCGCGACTCCGCAGCTGCCTGGCAAAAGGCGT
TTTCTATGTTACAGCATGCTTGGCAGTATAACCACGATGGAGCATGAAGGATACTCTCAC
ATAGAGATTGATTTTCATGACACAAGCAGTGGTCCCCGAGTCCCTGCAATGACTGATTAT
TTTGGGTTCACAATGGCTTCATTAAATGAAAATGGAAGTGTATTTGCAAATCCATGCAAG
GGTGAAAAGAATATGAGTACACTCATGTATCGACCTTTTGGTACCTGGGCAAATAACAGC
GAGTGGTCAATGCGATTTGAAGAGGAAGAAGTAAGAGCAGTTGCACTAGGAACTGGCTGG
GTAGCTGCCATTACTAGTTGCAATTTTCTTCGCATCTTCACAGAGGGTGGCCTGCAGAGG
CATATTCTTTCCCTTGATGGACCAGTGGTTACTGCAGCAGGCTTTAAGGATGAACTTGCT
GTTGTCACACATGCATCTTCCCCTCTTCCCTCAAACGAACAGATTCTTGAATTTAGAGTC
TTCAATATTCGTACTGGAACACTACCTCGCAGAGGAAGACTTCCATTGACTCCTGGTTCC
TGTTTGTCATGGTTTGGTTTTAGTGAAGAAGGACATCTCAGTTCTTTTGACTCAACGGGT
GTGCTAAGGGTCTTTACTAATCAATATGGTGGCAGTTGGCTTCCACTTTTCAGTGCCAGC
AAATTGAAGAAGTCAGAAGAAAACTATTGGGTTGTTGGGTTAAACTCAAGCAAGTTGTTC
TGTGTCATTTGCAAATCTCCTGACTCCTTTCCAGAGGCCACTCCTAAACCTATTCTCTCA
CTGTTGGATCTTTCATTCCCTCTTGCATCATCTGACCTTGGATCAGAAATCCTGGAGAAT
GAATTTATAATGAATAACATGCATCTCCACCGGATTCAGAGCACAATTGAAGAAATGGAA
GCTACTGGTGAGGACGCCAGTTTGCTTGATGACGAGGCTTTTAATACTGAAGCTGCTCTT
GATCGATGCATCCTGAGGCTCATCGCGTCCTGCTGCAATGGAGATAAGCTAGTGAGAGCT
ACAGAACTCGTAAAACTTCTGGCTTTGGAAAAATCAGTCAAAGGTGCTATAAAGCTTGTT
ACAGCACTGAAACTGCCAAATTTGGCAGAGCGCTTTAATGCCATATTGGAGGAAAGAATG
AATAAAGAAACAACTGGTGGCAAAATTTCTGCATCTACTGAGTTGAAAGGTGATAACTCC
TTTAATGCCCATGCTGCATTAACCAAGTCCCATATTAGGGCTGAAAGCAGCCAAAGATTG
GAATCACAGGATTCTCCATCCCTAAATTCCTTAGCTCCTTCTCATATGAAAAAACGACCT
CTAGAGGAACCAATCAAGGATGTAAACGTAGAGTCAGAAAATGCTAAAGCCAGAAAATTG
GAAATGGCAAGGGAATTCAAAAATGCATTTGATATGAAGAATGTTAAGAAAGTGAAGGAT
GAAAAGGACAAGGTGGATGAAGTGAAAAATGCAAATGAAGTGGAAGATGCACAAGATAAG
AATGGAGAAGCCAACAAGGTGACAGCACAACGCCCCTCTAATCCATTTGCAAAGTCATCG
AACAACAAACCAAATACATCCTTGTTTGATTCCTTAAAGAAAAAGGTGAAAGCGGACAGA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400042612
PEP Infomation

pacid=37460068 transcript=PGSC0003DMT400063296 locus=PGSC0003DMG400024615 ID=PGSC0003DMT400063296.v4.03 annot-version=v4.03
Sequence

MKIRSIKLREAHKNSNGVGSFCSVLWDQQGEHIVTASSSDSSICIHDAILPANPPKVVRQ
HRDGVTALALSPNYTCLASGSVDHSVKLYKFPAGEFDTNITRFTLPIRALAFNKSGTMLA
AAGDDEGIKLINTIDGSIARVLKGHRGSITGIAFDPKSEYLASVDSIGTVMLWELQSGNT
IHVLKGIAPVIGSDFSSTNIVSWSPDGDLLAVPGLKNDVVMYDRDTAEKLFSLRGDHVQP
ICFLSWSPNGKYMATSGLDRQVLIWDVDKKQDIDRQKFDNRITCMVWKPTGNALAVIDIM
GKYGVWESAVPSSMRSPTEDIPGLSSKSGHGLLFYDEEEENPSVSGSLSDLGEDSQGESE
PFSRKRLRKQHSYTDDWEEDTNEELELLPKVEPRKKAPHGHRDGSDNKRNKFKDVPISTG
AKMQEAIQPGATPQLPGKRRFLCYSMLGSITTMEHEGYSHIEIDFHDTSSGPRVPAMTDY
FGFTMASLNENGSVFANPCKGEKNMSTLMYRPFGTWANNSEWSMRFEEEEVRAVALGTGW
VAAITSCNFLRIFTEGGLQRHILSLDGPVVTAAGFKDELAVVTHASSPLPSNEQILEFRV
FNIRTGTLPRRGRLPLTPGSCLSWFGFSEEGHLSSFDSTGVLRVFTNQYGGSWLPLFSAS
KLKKSEENYWVVGLNSSKLFCVICKSPDSFPEATPKPILSLLDLSFPLASSDLGSEILEN
EFIMNNMHLHRIQSTIEEMEATGEDASLLDDEAFNTEAALDRCILRLIASCCNGDKLVRA
TELVKLLALEKSVKGAIKLVTALKLPNLAERFNAILEERMNKETTGGKISASTELKGDNS
FNAHAALTKSHIRAESSQRLESQDSPSLNSLAPSHMKKRPLEEPIKDVNVESENAKARKL
EMAREFKNAFDMKNVKKVKDEKDKVDEVKNANEVEDAQDKNGEANKVTAQRPSNPFAKSS
NNKPNTSLFDSLKKKVKADR*

Transcript Sequence

Transcript ID

PGSC0003DMT400063296
Transcript Infomation

pacid=37460068 locus=PGSC0003DMG400024615 ID=PGSC0003DMT400063296.v4.03 annot-version=v4.03
Sequence

ATGAAGATCAGATCCATTAAGCTTAGAGAAGCTCACAAGAACAGCAATGGCGTCGGGTCA
TTCTGCTCGGTTTTATGGGATCAGCAGGGAGAACACATCGTCACTGCGTCTTCTTCTGAT
TCTTCAATTTGCATTCACGATGCTATTTTGCCAGCTAATCCCCCTAAAGTTGTTCGACAG
CACAGAGATGGCGTCACCGCTTTGGCTCTCAGCCCTAATTACACCTGTCTGGCTTCTGGA
TCTGTTGACCATTCCGTCAAACTCTACAAATTTCCTGCTGGGGAGTTCGATACTAACATT
ACTAGATTTACATTGCCAATACGGGCGCTTGCTTTCAATAAGTCCGGAACTATGCTGGCA
GCTGCTGGTGATGATGAAGGCATCAAACTTATAAATACCATTGATGGCTCGATCGCAAGA
GTTCTTAAAGGACATAGAGGATCCATCACTGGCATAGCTTTTGATCCCAAAAGTGAATAC
CTGGCTTCAGTTGATTCAATAGGGACTGTTATGCTCTGGGAACTCCAGTCTGGGAACACA
ATTCATGTCTTAAAAGGAATAGCTCCTGTCATTGGTTCTGATTTTTCTTCTACGAATATA
GTTAGCTGGAGTCCTGATGGGGATCTATTAGCTGTTCCTGGCTTGAAAAATGATGTGGTG
ATGTACGACAGAGACACTGCAGAAAAACTGTTTTCTCTTAGAGGTGATCATGTACAACCC
ATTTGCTTTTTGTCTTGGTCACCAAATGGAAAGTACATGGCTACTTCTGGACTAGATAGA
CAGGTTTTGATATGGGATGTTGATAAGAAACAAGATATTGATCGGCAGAAATTTGATAAC
AGGATAACTTGTATGGTGTGGAAACCAACTGGCAATGCATTGGCAGTAATTGACATCATG
GGAAAGTATGGGGTTTGGGAATCAGCTGTACCTTCTTCAATGAGATCTCCCACAGAAGAT
ATTCCTGGTTTAAGTTCTAAAAGTGGTCATGGTCTTCTTTTCTATGATGAAGAGGAAGAA
AACCCCAGTGTATCTGGTAGTTTAAGTGATCTCGGAGAAGATAGTCAAGGTGAATCTGAA
CCATTCAGCAGAAAAAGATTACGCAAACAGCATAGTTATACTGATGATTGGGAAGAGGAC
ACAAATGAAGAGTTGGAGTTACTTCCAAAAGTTGAACCTCGTAAGAAGGCTCCTCATGGT
CACAGGGATGGTTCAGATAATAAAAGAAATAAGTTCAAGGATGTGCCAATTTCTACAGGG
GCAAAAATGCAAGAAGCTATTCAGCCAGGCGCGACTCCGCAGCTGCCTGGCAAAAGGCGT
TTTCTATGTTACAGCATGCTTGGCAGTATAACCACGATGGAGCATGAAGGATACTCTCAC
ATAGAGATTGATTTTCATGACACAAGCAGTGGTCCCCGAGTCCCTGCAATGACTGATTAT
TTTGGGTTCACAATGGCTTCATTAAATGAAAATGGAAGTGTATTTGCAAATCCATGCAAG
GGTGAAAAGAATATGAGTACACTCATGTATCGACCTTTTGGTACCTGGGCAAATAACAGC
GAGTGGTCAATGCGATTTGAAGAGGAAGAAGTAAGAGCAGTTGCACTAGGAACTGGCTGG
GTAGCTGCCATTACTAGTTGCAATTTTCTTCGCATCTTCACAGAGGGTGGCCTGCAGAGG
CATATTCTTTCCCTTGATGGACCAGTGGTTACTGCAGCAGGCTTTAAGGATGAACTTGCT
GTTGTCACACATGCATCTTCCCCTCTTCCCTCAAACGAACAGATTCTTGAATTTAGAGTC
TTCAATATTCGTACTGGAACACTACCTCGCAGAGGAAGACTTCCATTGACTCCTGGTTCC
TGTTTGTCATGGTTTGGTTTTAGTGAAGAAGGACATCTCAGTTCTTTTGACTCAACGGGT
GTGCTAAGGGTCTTTACTAATCAATATGGTGGCAGTTGGCTTCCACTTTTCAGTGCCAGC
AAATTGAAGAAGTCAGAAGAAAACTATTGGGTTGTTGGGTTAAACTCAAGCAAGTTGTTC
TGTGTCATTTGCAAATCTCCTGACTCCTTTCCAGAGGCCACTCCTAAACCTATTCTCTCA
CTGTTGGATCTTTCATTCCCTCTTGCATCATCTGACCTTGGATCAGAAATCCTGGAGAAT
GAATTTATAATGAATAACATGCATCTCCACCGGATTCAGAGCACAATTGAAGAAATGGAA
GCTACTGGTGAGGACGCCAGTTTGCTTGATGACGAGGCTTTTAATACTGAAGCTGCTCTT
GATCGATGCATCCTGAGGCTCATCGCGTCCTGCTGCAATGGAGATAAGCTAGTGAGAGCT
ACAGAACTCGTAAAACTTCTGGCTTTGGAAAAATCAGTCAAAGGTGCTATAAAGCTTGTT
ACAGCACTGAAACTGCCAAATTTGGCAGAGCGCTTTAATGCCATATTGGAGGAAAGAATG
AATAAAGAAACAACTGGTGGCAAAATTTCTGCATCTACTGAGTTGAAAGGTGATAACTCC
TTTAATGCCCATGCTGCATTAACCAAGTCCCATATTAGGGCTGAAAGCAGCCAAAGATTG
GAATCACAGGATTCTCCATCCCTAAATTCCTTAGCTCCTTCTCATATGAAAAAACGACCT
CTAGAGGAACCAATCAAGGATGTAAACGTAGAGTCAGAAAATGCTAAAGCCAGAAAATTG
GAAATGGCAAGGGAATTCAAAAATGCATTTGATATGAAGAATGTTAAGAAAGTGAAGGAT
GAAAAGGACAAGGTGGATGAAGTGAAAAATGCAAATGAAGTGGAAGATGCACAAGATAAG
AATGGAGAAGCCAACAAGGTGACAGCACAACGCCCCTCTAATCCATTTGCAAAGTCATCG
AACAACAAACCAAATACATCCTTGTTTGATTCCTTAAAGAAAAAGGTGAAAGCGGACAGA
TGA