Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063292
CDS Infomation

pacid=37461005 polypeptide=PGSC0003DMP400042608 locus=PGSC0003DMG400024613 ID=PGSC0003DMT400063292.v4.03 annot-version=v4.03
Sequence

ATGAAAAACCTGTATCACGCCGTTGATTGGGAGAAAGAGTCTTTCCCTGAGTACCAGGAT
TTGAAATTTCTCATATTTTTCGCTTTCTTCTTCCCCGTTCTTCGATTCATACTTGACAGA
TTTGTTTTCGAGGCATTGGCTAAGCGCATGATTTTTGGAAAGAACGCAGTTGTAAATATC
AACGGTCGTGAAGAGAGGAAGAAGATCAACAAATTCAAAGAGTCAGCATGGAAATTTGTA
TATTTTCTATCTGCTGAGCTACTTGCACTATCTGTGACTTGTAATGAGCCTTGGTTCACA
GATAGTCGGTATTTCTGGGCAGGACCTGGAGATCTGGTTTGGCCTAATCTGAAAATGAAA
TTAAAGCTGAAATTGTTGTACATGTATGCTGGAGGATTCTACTTGTACTCCATATTCGCA
ACGCTTTATTGGGAAACAAGACGCTCAGATTTTGCTGCTCAAATAATTCATCATTTAGCA
ACAGTATCACTCATTGTGTTGTCTTATGTATACGGGTTTGCGCGTATTGGATCAGTGGTT
CTAGCACTTCATGACGGAAGTGATGTATTCATGGAAATTGCAAAGATATCGAAATACAGT
GGCTTTGATTTGATTGCTGATATTTTCTTCTCTCTTTTCGCGTTGGTTTTTACATCACTT
CGTATAATCTGCTATCCCTTCTGGATAATCCGAAGCACATGCTACGAACTTCCTTTTGTA
CTGGATATGGAGAAGGAACGGACTACTGGTATCATACTTTACTTTGTTTTCAATGCATTG
CTGATATGCTTGCTGGTTCTTCACCTCTTTTGGTTCCAAATCATACTGCGGATGGTTAAG
AACCAAATCCTATCAAGAGGCCACATTACTGATGATGTTCGAGAAGATTCTGAATCTGAT
GATGAGCACGAAGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042608
PEP Infomation

pacid=37461005 transcript=PGSC0003DMT400063292 locus=PGSC0003DMG400024613 ID=PGSC0003DMT400063292.v4.03 annot-version=v4.03
Sequence

MKNLYHAVDWEKESFPEYQDLKFLIFFAFFFPVLRFILDRFVFEALAKRMIFGKNAVVNI
NGREERKKINKFKESAWKFVYFLSAELLALSVTCNEPWFTDSRYFWAGPGDLVWPNLKMK
LKLKLLYMYAGGFYLYSIFATLYWETRRSDFAAQIIHHLATVSLIVLSYVYGFARIGSVV
LALHDGSDVFMEIAKISKYSGFDLIADIFFSLFALVFTSLRIICYPFWIIRSTCYELPFV
LDMEKERTTGIILYFVFNALLICLLVLHLFWFQIILRMVKNQILSRGHITDDVREDSESD
DEHED*

Transcript Sequence

Transcript ID

PGSC0003DMT400063292
Transcript Infomation

pacid=37461005 locus=PGSC0003DMG400024613 ID=PGSC0003DMT400063292.v4.03 annot-version=v4.03
Sequence

ATGAAAAACCTGTATCACGCCGTTGATTGGGAGAAAGAGTCTTTCCCTGAGTACCAGGAT
TTGAAATTTCTCATATTTTTCGCTTTCTTCTTCCCCGTTCTTCGATTCATACTTGACAGA
TTTGTTTTCGAGGCATTGGCTAAGCGCATGATTTTTGGAAAGAACGCAGTTGTAAATATC
AACGGTCGTGAAGAGAGGAAGAAGATCAACAAATTCAAAGAGTCAGCATGGAAATTTGTA
TATTTTCTATCTGCTGAGCTACTTGCACTATCTGTGACTTGTAATGAGCCTTGGTTCACA
GATAGTCGGTATTTCTGGGCAGGACCTGGAGATCTGGTTTGGCCTAATCTGAAAATGAAA
TTAAAGCTGAAATTGTTGTACATGTATGCTGGAGGATTCTACTTGTACTCCATATTCGCA
ACGCTTTATTGGGAAACAAGACGCTCAGATTTTGCTGCTCAAATAATTCATCATTTAGCA
ACAGTATCACTCATTGTGTTGTCTTATGTATACGGGTTTGCGCGTATTGGATCAGTGGTT
CTAGCACTTCATGACGGAAGTGATGTATTCATGGAAATTGCAAAGATATCGAAATACAGT
GGCTTTGATTTGATTGCTGATATTTTCTTCTCTCTTTTCGCGTTGGTTTTTACATCACTT
CGTATAATCTGCTATCCCTTCTGGATAATCCGAAGCACATGCTACGAACTTCCTTTTGTA
CTGGATATGGAGAAGGAACGGACTACTGGTATCATACTTTACTTTGTTTTCAATGCATTG
CTGATATGCTTGCTGGTTCTTCACCTCTTTTGGTTCCAAATCATACTGCGGATGGTTAAG
AACCAAATCCTATCAAGAGGCCACATTACTGATGATGTTCGAGAAGATTCTGAATCTGAT
GATGAGCACGAAGACTGA