Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063205
CDS Infomation

pacid=37458958 polypeptide=PGSC0003DMP400042549 locus=PGSC0003DMG400024582 ID=PGSC0003DMT400063205.v4.03 annot-version=v4.03
Sequence

ATGGCAATTCCTAATATACGGATCCCTTGTCGGCAGTTGTTCATCGACGGTGAATGGAGA
GAACCCCTCAAGAAGAACCGGTTACCCATCATCAATCCGGCCAACGAAGAAATTATCGGG
TATATTCCGGCAGCTACAGAGGAGGATGTAGATATTGCCGTCAAAGCTGCACGGAGTGCG
CTTCGTCGGGATGACTGGGGTTCTACTACTGGAGCACAGCGTGCCAAGTATCTTCGTGCT
ATTGCTGCTAAGGTACTGGAGAAAAAGCCTGAACTAGCTACACTTGAGACGATTGATAAT
GGAAAACCCTGGTTCGAGGCTGCCTCGGATATAGATGATGTCGTAGCGTGTTTTGAGTAC
TATGCAGATCTCGCTGAAGCTTTGGATTCAAAAAAGAAGACTGAAGTTAAACTTCATTTG
GATTCATTCAAGACCCATGTTTTAAGAGAACCTCTTGGTGTTGTGGGGTTGATTACTCCA
TGGAATTATCCTCTTTTGATGACTACATGGAAAGTCGCTCCTGCCCTAGCTGCTGGTTGT
GCAGCAATACTTAAGCCATCAGAACTAGCATCTATTACCTCTTTGGAGTTGGGTGAAATC
TGTAGAGAGGTGGGTCTTCCTCCTGGTGCCCTTAGCATACTAACGGGATTGGGACATGAA
GCTGGTTCTCCTTTGGTATCACATCCTGATGTTGATAAGATTGCATTTACAGGAAGTGGC
CCAACAGGGGTCAAGATCATGACTGCTGCAGCTCAACTTGTTAAACCAGTTACTCTTGAG
CTTGGTGGAAAAAGTCCAATAGTTGTGTTTGATGACATTCATGACCTTGATATAGCTGTT
GAGTGGACTCTTTTTGGCTGCTTTTGGACAAATGGTCAAATTTGCAGTGCAACATCACGT
CTTATAATACAGGAAACAATTGCTCCACAATTTTTGGCCAGGCTTCTTGAGTGGACAAAA
AACATTAAAATCTCAGATCCCTTGGAAGAAGACTGCAAGCTTGGTCCTGTCATTAGTCGT
GGACAGTATGAGAAGGTCTTGAAGTTCATCTCTACAGCCAAAGATGAAGGTGCAACCATT
CTTTATGGTGGCGACCGTCCTGAGCACTTAAAGAAAGGATATTACATTCAACCAACAATC
ATAACTGATGTTGATACGTCCATGGAAATCTGGAATGAGGAGGTATTTGGACCTGTTCTT
TGTGTCAAAACATTTAAAACTGAAGAGGAAGCCATTGAACTAGCAAATGATACCAAGTAT
GGTTTGGGTGCTGCTATTTTGTCAAAAGATCTTGAAAGATGTGAACGTTTCACAAAGGCT
TTTCAGTCAGGGGTTGTCTGGATCAACTGCTCGCAGCCATGCTTTTGGCAACCACCATGG
GGGGGTAAGAAGCGTAGTGGTTTTGGACGTGAGCTTGGGGAATGGAGTCTCGAGAACTAC
CTAAACATTAAACAGGTGACTCAGTATGTGACTCCGGACGAACCATGGGCTTTTTACAAG
TCTCCTTCAAAGCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042549
PEP Infomation

pacid=37458958 transcript=PGSC0003DMT400063205 locus=PGSC0003DMG400024582 ID=PGSC0003DMT400063205.v4.03 annot-version=v4.03
Sequence

MAIPNIRIPCRQLFIDGEWREPLKKNRLPIINPANEEIIGYIPAATEEDVDIAVKAARSA
LRRDDWGSTTGAQRAKYLRAIAAKVLEKKPELATLETIDNGKPWFEAASDIDDVVACFEY
YADLAEALDSKKKTEVKLHLDSFKTHVLREPLGVVGLITPWNYPLLMTTWKVAPALAAGC
AAILKPSELASITSLELGEICREVGLPPGALSILTGLGHEAGSPLVSHPDVDKIAFTGSG
PTGVKIMTAAAQLVKPVTLELGGKSPIVVFDDIHDLDIAVEWTLFGCFWTNGQICSATSR
LIIQETIAPQFLARLLEWTKNIKISDPLEEDCKLGPVISRGQYEKVLKFISTAKDEGATI
LYGGDRPEHLKKGYYIQPTIITDVDTSMEIWNEEVFGPVLCVKTFKTEEEAIELANDTKY
GLGAAILSKDLERCERFTKAFQSGVVWINCSQPCFWQPPWGGKKRSGFGRELGEWSLENY
LNIKQVTQYVTPDEPWAFYKSPSKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400063205
Transcript Infomation

pacid=37458958 locus=PGSC0003DMG400024582 ID=PGSC0003DMT400063205.v4.03 annot-version=v4.03
Sequence

ATGGCAATTCCTAATATACGGATCCCTTGTCGGCAGTTGTTCATCGACGGTGAATGGAGA
GAACCCCTCAAGAAGAACCGGTTACCCATCATCAATCCGGCCAACGAAGAAATTATCGGG
TATATTCCGGCAGCTACAGAGGAGGATGTAGATATTGCCGTCAAAGCTGCACGGAGTGCG
CTTCGTCGGGATGACTGGGGTTCTACTACTGGAGCACAGCGTGCCAAGTATCTTCGTGCT
ATTGCTGCTAAGGTACTGGAGAAAAAGCCTGAACTAGCTACACTTGAGACGATTGATAAT
GGAAAACCCTGGTTCGAGGCTGCCTCGGATATAGATGATGTCGTAGCGTGTTTTGAGTAC
TATGCAGATCTCGCTGAAGCTTTGGATTCAAAAAAGAAGACTGAAGTTAAACTTCATTTG
GATTCATTCAAGACCCATGTTTTAAGAGAACCTCTTGGTGTTGTGGGGTTGATTACTCCA
TGGAATTATCCTCTTTTGATGACTACATGGAAAGTCGCTCCTGCCCTAGCTGCTGGTTGT
GCAGCAATACTTAAGCCATCAGAACTAGCATCTATTACCTCTTTGGAGTTGGGTGAAATC
TGTAGAGAGGTGGGTCTTCCTCCTGGTGCCCTTAGCATACTAACGGGATTGGGACATGAA
GCTGGTTCTCCTTTGGTATCACATCCTGATGTTGATAAGATTGCATTTACAGGAAGTGGC
CCAACAGGGGTCAAGATCATGACTGCTGCAGCTCAACTTGTTAAACCAGTTACTCTTGAG
CTTGGTGGAAAAAGTCCAATAGTTGTGTTTGATGACATTCATGACCTTGATATAGCTGTT
GAGTGGACTCTTTTTGGCTGCTTTTGGACAAATGGTCAAATTTGCAGTGCAACATCACGT
CTTATAATACAGGAAACAATTGCTCCACAATTTTTGGCCAGGCTTCTTGAGTGGACAAAA
AACATTAAAATCTCAGATCCCTTGGAAGAAGACTGCAAGCTTGGTCCTGTCATTAGTCGT
GGACAGTATGAGAAGGTCTTGAAGTTCATCTCTACAGCCAAAGATGAAGGTGCAACCATT
CTTTATGGTGGCGACCGTCCTGAGCACTTAAAGAAAGGATATTACATTCAACCAACAATC
ATAACTGATGTTGATACGTCCATGGAAATCTGGAATGAGGAGGTATTTGGACCTGTTCTT
TGTGTCAAAACATTTAAAACTGAAGAGGAAGCCATTGAACTAGCAAATGATACCAAGTAT
GGTTTGGGTGCTGCTATTTTGTCAAAAGATCTTGAAAGATGTGAACGTTTCACAAAGGCT
TTTCAGTCAGGGGTTGTCTGGATCAACTGCTCGCAGCCATGCTTTTGGCAACCACCATGG
GGGGGTAAGAAGCGTAGTGGTTTTGGACGTGAGCTTGGGGAATGGAGTCTCGAGAACTAC
CTAAACATTAAACAGGTGACTCAGTATGTGACTCCGGACGAACCATGGGCTTTTTACAAG
TCTCCTTCAAAGCTGTGA