Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063183
CDS Infomation

pacid=37459464 polypeptide=PGSC0003DMP400042535 locus=PGSC0003DMG400024575 ID=PGSC0003DMT400063183.v4.03 annot-version=v4.03
Sequence

ATGTCGGTCCACAGTAAGCAAAACCAGAACCAAACACGTGATATGAAGCACCGGGTACTC
ACATGCCTACACAAGCTTTCCGACCGGGATACACATTCGGCGGCGGCTTCTGAACTCGAG
TCTATTGCTAAAACTCTTTCCCCTGAAGCAATTCCTCCTTTTGTTTCCTCCATTTCCGTC
ACTGATTCTTCGGATAAGTCACCAGTCCGTAAACAATGTCTCCGACTGATCTCCCTTCTT
TCTGAGCATCATGGAGATTCTCTCTCTCCTCATCTTTCTAAACTTCTAACCGCCGTCGTC
CGCCGACTCCGCGACGCGGATTCCGCCGTACGCACTGCTTGCGTCACTGCTTGTGCGTCC
ATTTCGTCACATCTGACTAAACCTCCATTCTCCTCAATTATCAAGCCGTTCCTGGAAGCG
CTTTTCACGGAACAGGAGATGAACTCGCAGATCGGTGCTGCTTTGTGTTTGTCGGCAGCT
ATCGAGGCGTCGCCAGATCCGGATATTGCCTGCTTGAGGAAGTCGTTGCCGAGATTTGAG
AAGTTGCTTAAGAGTGATAGCTTCAAAGCGAAGGCAGCATTGCTTACAATGATTGGCAGT
GTGATCGCAGTTGGAGGAGCTTCTAGTCAGCAAATTGTGAGGAATTTGGTGCCGTATTTG
GTGGAATTCGTGAGTAGTGATGATTGGGCGGCTCGGAAAGCCAGTGCAGAGGCTTTGCTG
AGGCTCGCGGCAGTTGAGGGAGACGCCTTATCTGAGTTTAAAGCACCGTGCTTGAAGACA
TTCGAGGCGAAACGATTTGATAAGGTAAAGGCAGTGAGAGAAGCAATGAATCAAATGTTG
GAAGCCTGGAAGGGAATCCCTGATTTGTCTGATGATGGTTCCCCTCTTCCTTTGTCAAAT
TCCTCTTCCAAAGAAAATGCAAGTGATGGACGTTATCCTCCTGGTCTGAAGACTTCCAGG
GCTGTGAGCTCTAGTGCTCCTAGTGTAAAAAGGCCATCTAACAAGTCATCTGTAGCAGAT
AATTCCACTGCTCCTGCTGCCCACAAAGGTCCAGCAATCTTTCGCAAACTTGATCGCAAG
AAGCCATGGAAAGTTGAAGTTTCTGCTCCTCATGGTTCTTCTGCGGATTATCACCAAAAC
AAAGATGGGATACAGTTGGGCAAAGACGAGGAGTTGGAAACACATACACAACCTGGAGTC
AAACGTACTCTTTTTAGTAAGATCACTAATGAAACCAGGAATAGTGTGGTGAAGGCTGGA
TGTCGTGTGGTTCCATATCAAGATGAGATATCAGAATCTACTGTAGTTGTGAGCAATGAA
ACTGAAGATCTCTGTAGGAACCCAAAAGATTGTGAAGATCTCTCGCTGATCCGGAAACAA
CTTGCTCAAATTGAAACTCAGCAGTCCAATTTGTTAGATCTTCTCCAGAAATTTATGGGG
AGCTCACAAAGTGGCATGCATTCTCTGGAGACACGTGTACATGGTCTGGAACTGGCATTA
GATGAAATCTCATTTGACTTGGCTATGTCAACCGGAAAGATGTCAAATACCAACTCTGCA
TCCATGTGTTGCAAGCTACCAGGTGCAGAATTCTTGACTTCAAAACTTTGGAAGAAAACA
GAAGGTCGTGGTGCAACTTCACACTTCTCTGCTTCTGGTGGAACCTCATCATCAGCAGGT
TTAATAAGCAACGTAGCTGGTCAGAATGGAAATGGTGAAAGACTTAAGTTGGAGAATAGG
ACATACCGACTCCATAGTAGTCGTGGGTTTATTGTGAACCCCTTAGCTGAAATTCATGGT
GATCCACAGAGAATTTCTGAACCTTCAGTTGGTGGAGTTTCAAAAAGTTTGCGAAATGGT
GTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400042535
PEP Infomation

pacid=37459464 transcript=PGSC0003DMT400063183 locus=PGSC0003DMG400024575 ID=PGSC0003DMT400063183.v4.03 annot-version=v4.03
Sequence

MSVHSKQNQNQTRDMKHRVLTCLHKLSDRDTHSAAASELESIAKTLSPEAIPPFVSSISV
TDSSDKSPVRKQCLRLISLLSEHHGDSLSPHLSKLLTAVVRRLRDADSAVRTACVTACAS
ISSHLTKPPFSSIIKPFLEALFTEQEMNSQIGAALCLSAAIEASPDPDIACLRKSLPRFE
KLLKSDSFKAKAALLTMIGSVIAVGGASSQQIVRNLVPYLVEFVSSDDWAARKASAEALL
RLAAVEGDALSEFKAPCLKTFEAKRFDKVKAVREAMNQMLEAWKGIPDLSDDGSPLPLSN
SSSKENASDGRYPPGLKTSRAVSSSAPSVKRPSNKSSVADNSTAPAAHKGPAIFRKLDRK
KPWKVEVSAPHGSSADYHQNKDGIQLGKDEELETHTQPGVKRTLFSKITNETRNSVVKAG
CRVVPYQDEISESTVVVSNETEDLCRNPKDCEDLSLIRKQLAQIETQQSNLLDLLQKFMG
SSQSGMHSLETRVHGLELALDEISFDLAMSTGKMSNTNSASMCCKLPGAEFLTSKLWKKT
EGRGATSHFSASGGTSSSAGLISNVAGQNGNGERLKLENRTYRLHSSRGFIVNPLAEIHG
DPQRISEPSVGGVSKSLRNGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400063183
Transcript Infomation

pacid=37459464 locus=PGSC0003DMG400024575 ID=PGSC0003DMT400063183.v4.03 annot-version=v4.03
Sequence

ATGTCGGTCCACAGTAAGCAAAACCAGAACCAAACACGTGATATGAAGCACCGGGTACTC
ACATGCCTACACAAGCTTTCCGACCGGGATACACATTCGGCGGCGGCTTCTGAACTCGAG
TCTATTGCTAAAACTCTTTCCCCTGAAGCAATTCCTCCTTTTGTTTCCTCCATTTCCGTC
ACTGATTCTTCGGATAAGTCACCAGTCCGTAAACAATGTCTCCGACTGATCTCCCTTCTT
TCTGAGCATCATGGAGATTCTCTCTCTCCTCATCTTTCTAAACTTCTAACCGCCGTCGTC
CGCCGACTCCGCGACGCGGATTCCGCCGTACGCACTGCTTGCGTCACTGCTTGTGCGTCC
ATTTCGTCACATCTGACTAAACCTCCATTCTCCTCAATTATCAAGCCGTTCCTGGAAGCG
CTTTTCACGGAACAGGAGATGAACTCGCAGATCGGTGCTGCTTTGTGTTTGTCGGCAGCT
ATCGAGGCGTCGCCAGATCCGGATATTGCCTGCTTGAGGAAGTCGTTGCCGAGATTTGAG
AAGTTGCTTAAGAGTGATAGCTTCAAAGCGAAGGCAGCATTGCTTACAATGATTGGCAGT
GTGATCGCAGTTGGAGGAGCTTCTAGTCAGCAAATTGTGAGGAATTTGGTGCCGTATTTG
GTGGAATTCGTGAGTAGTGATGATTGGGCGGCTCGGAAAGCCAGTGCAGAGGCTTTGCTG
AGGCTCGCGGCAGTTGAGGGAGACGCCTTATCTGAGTTTAAAGCACCGTGCTTGAAGACA
TTCGAGGCGAAACGATTTGATAAGGTAAAGGCAGTGAGAGAAGCAATGAATCAAATGTTG
GAAGCCTGGAAGGGAATCCCTGATTTGTCTGATGATGGTTCCCCTCTTCCTTTGTCAAAT
TCCTCTTCCAAAGAAAATGCAAGTGATGGACGTTATCCTCCTGGTCTGAAGACTTCCAGG
GCTGTGAGCTCTAGTGCTCCTAGTGTAAAAAGGCCATCTAACAAGTCATCTGTAGCAGAT
AATTCCACTGCTCCTGCTGCCCACAAAGGTCCAGCAATCTTTCGCAAACTTGATCGCAAG
AAGCCATGGAAAGTTGAAGTTTCTGCTCCTCATGGTTCTTCTGCGGATTATCACCAAAAC
AAAGATGGGATACAGTTGGGCAAAGACGAGGAGTTGGAAACACATACACAACCTGGAGTC
AAACGTACTCTTTTTAGTAAGATCACTAATGAAACCAGGAATAGTGTGGTGAAGGCTGGA
TGTCGTGTGGTTCCATATCAAGATGAGATATCAGAATCTACTGTAGTTGTGAGCAATGAA
ACTGAAGATCTCTGTAGGAACCCAAAAGATTGTGAAGATCTCTCGCTGATCCGGAAACAA
CTTGCTCAAATTGAAACTCAGCAGTCCAATTTGTTAGATCTTCTCCAGAAATTTATGGGG
AGCTCACAAAGTGGCATGCATTCTCTGGAGACACGTGTACATGGTCTGGAACTGGCATTA
GATGAAATCTCATTTGACTTGGCTATGTCAACCGGAAAGATGTCAAATACCAACTCTGCA
TCCATGTGTTGCAAGCTACCAGGTGCAGAATTCTTGACTTCAAAACTTTGGAAGAAAACA
GAAGGTCGTGGTGCAACTTCACACTTCTCTGCTTCTGGTGGAACCTCATCATCAGCAGGT
TTAATAAGCAACGTAGCTGGTCAGAATGGAAATGGTGAAAGACTTAAGTTGGAGAATAGG
ACATACCGACTCCATAGTAGTCGTGGGTTTATTGTGAACCCCTTAGCTGAAATTCATGGT
GATCCACAGAGAATTTCTGAACCTTCAGTTGGTGGAGTTTCAAAAAGTTTGCGAAATGGT
GTATGA