Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063137
CDS Infomation

pacid=37463794 polypeptide=PGSC0003DMP400042497 locus=PGSC0003DMG400024559 ID=PGSC0003DMT400063137.v4.03 annot-version=v4.03
Sequence

ATGGCACGAGAAATTATGATCCTCCGCAGGCTTGATCACCCCAATATCATCAAATTAGAG
GGTCTAATTACCTCCAGATTGTCTTGTAGCATGTATCTTGTGTTCGAGTATATGGAGCAT
GATATTTCAGGACTCCTGTCTTGTCCAGAAGTTGAGTTCAGCGAATCACAGATTAAATGC
TACATGAAGCAGTTGTTGTCTGGAATCGAGCATTGTCATTCTCGAGGCGTAATGCATCGG
GACATCAAAGGTGCAAATCTTCTGGTAAATAATGACGGAATTTTAAAGGTGGCAGATTTT
GGATTGGCGAACTTCTGTAACCTTGGAAGGAAGCAACCACTAACCAGCCGAGTTGTCACT
TTATGGTATCGTCCTCCAGAGCTTCTGTTGGGCTCCACAGAGTATGGAGCCTCTGTGGAT
CTTTGGAGTGTCGGATGCGTGTTTGGTGAACTTCTTACTGGTAAACCTATTCTTCAGGGG
AGAACTGAGGTTGAACAGCTGCATAAAATTTTTAAGCTCTGTGGATCCCCACCAGATGAT
TACTGGAAGAAATCTAAACTTCCTCATGCAACTCTATTTAAACCGCAACATCCTTATGAG
AGCTGTCTGTGGGACACATTTAAAGATCTAACCAAAAGTTCAGTCTCACTCATAGAGACT
CTTCTTTCAGTGGAGCCACCGAAACGTGGAACTGCTTCTTCTGCCCTTGCATCTGAGTAC
TTCAAGACAAGGCCTCACGCCTGTGATCCTTTAAGCCTGCCAAAGTATCCACCAAGCAAA
GAGATTGATGCCAAATACTGTGAAGAAGCAAAAAGGAAGAAGCCTAGTGGAAGAGCCCGT
GGACCTGAGACAACCAGAAAGTCAATCAGAAAACAGAATGCGACAAATAAACTGGCACCT
GAAGAGAAGTTACCCGTCCAAAATCAAGGTGTTCCTAAAAGTAATGGTAGTAGTCTGGGT
ACTCTAAAAGAAGGAGACATTATTATAGGTCTTGAGCGACCTAAGCCATCCGTTGATTTG
AGGGGAGAGGCTTCCCACATTAAGAATGCATCTCAAGGTGATTTCCCCTTTTCAGGCCCT
CTTCAAGTTTCAGGATCAAGTGGTTTTGCATGGGCGAAAAGACGGGTTGATGATTCGTCA
ATGAGATCAAGGAGTAAATCAAGTTCAAGAAGCCTAAAGTTTGAACCTTCAGGTGCACTT
CATACTAAAAATAACATGGAGCTAAAAAAACAAGAGAACTATGAAGCTACAAATGGAAGT
CGCACCAATTCTAAGGGCCGTGACACCTATGAATCCACCAAACATGCAATGCAACGACAT
TGGAGCCAATTAGAACAGACAGATTCGTTTGATGCTTCTGATGGCTATCACTCTCAAGAA
CTGTCACTGGCTCTCTATCTGAAAGAGGAGACAGCTTTCAAGAGGATCAACGTGGTTCAG
GATCAAATGGACAAAGTTGAATTCTCAGGACCTTTGCTATCTCAATCACATAGAGTTGAA
GAACTCCTGGAGAAACATGAGCGCCAGATCCGCCAAGCTGTTCGACGATCATGGTTCCAA
AGAGTGAGGAAAAATGGAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042497
PEP Infomation

pacid=37463794 transcript=PGSC0003DMT400063137 locus=PGSC0003DMG400024559 ID=PGSC0003DMT400063137.v4.03 annot-version=v4.03
Sequence

MAREIMILRRLDHPNIIKLEGLITSRLSCSMYLVFEYMEHDISGLLSCPEVEFSESQIKC
YMKQLLSGIEHCHSRGVMHRDIKGANLLVNNDGILKVADFGLANFCNLGRKQPLTSRVVT
LWYRPPELLLGSTEYGASVDLWSVGCVFGELLTGKPILQGRTEVEQLHKIFKLCGSPPDD
YWKKSKLPHATLFKPQHPYESCLWDTFKDLTKSSVSLIETLLSVEPPKRGTASSALASEY
FKTRPHACDPLSLPKYPPSKEIDAKYCEEAKRKKPSGRARGPETTRKSIRKQNATNKLAP
EEKLPVQNQGVPKSNGSSLGTLKEGDIIIGLERPKPSVDLRGEASHIKNASQGDFPFSGP
LQVSGSSGFAWAKRRVDDSSMRSRSKSSSRSLKFEPSGALHTKNNMELKKQENYEATNGS
RTNSKGRDTYESTKHAMQRHWSQLEQTDSFDASDGYHSQELSLALYLKEETAFKRINVVQ
DQMDKVEFSGPLLSQSHRVEELLEKHERQIRQAVRRSWFQRVRKNGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400063137
Transcript Infomation

pacid=37463794 locus=PGSC0003DMG400024559 ID=PGSC0003DMT400063137.v4.03 annot-version=v4.03
Sequence

ATGGCACGAGAAATTATGATCCTCCGCAGGCTTGATCACCCCAATATCATCAAATTAGAG
GGTCTAATTACCTCCAGATTGTCTTGTAGCATGTATCTTGTGTTCGAGTATATGGAGCAT
GATATTTCAGGACTCCTGTCTTGTCCAGAAGTTGAGTTCAGCGAATCACAGATTAAATGC
TACATGAAGCAGTTGTTGTCTGGAATCGAGCATTGTCATTCTCGAGGCGTAATGCATCGG
GACATCAAAGGTGCAAATCTTCTGGTAAATAATGACGGAATTTTAAAGGTGGCAGATTTT
GGATTGGCGAACTTCTGTAACCTTGGAAGGAAGCAACCACTAACCAGCCGAGTTGTCACT
TTATGGTATCGTCCTCCAGAGCTTCTGTTGGGCTCCACAGAGTATGGAGCCTCTGTGGAT
CTTTGGAGTGTCGGATGCGTGTTTGGTGAACTTCTTACTGGTAAACCTATTCTTCAGGGG
AGAACTGAGGTTGAACAGCTGCATAAAATTTTTAAGCTCTGTGGATCCCCACCAGATGAT
TACTGGAAGAAATCTAAACTTCCTCATGCAACTCTATTTAAACCGCAACATCCTTATGAG
AGCTGTCTGTGGGACACATTTAAAGATCTAACCAAAAGTTCAGTCTCACTCATAGAGACT
CTTCTTTCAGTGGAGCCACCGAAACGTGGAACTGCTTCTTCTGCCCTTGCATCTGAGTAC
TTCAAGACAAGGCCTCACGCCTGTGATCCTTTAAGCCTGCCAAAGTATCCACCAAGCAAA
GAGATTGATGCCAAATACTGTGAAGAAGCAAAAAGGAAGAAGCCTAGTGGAAGAGCCCGT
GGACCTGAGACAACCAGAAAGTCAATCAGAAAACAGAATGCGACAAATAAACTGGCACCT
GAAGAGAAGTTACCCGTCCAAAATCAAGGTGTTCCTAAAAGTAATGGTAGTAGTCTGGGT
ACTCTAAAAGAAGGAGACATTATTATAGGTCTTGAGCGACCTAAGCCATCCGTTGATTTG
AGGGGAGAGGCTTCCCACATTAAGAATGCATCTCAAGGTGATTTCCCCTTTTCAGGCCCT
CTTCAAGTTTCAGGATCAAGTGGTTTTGCATGGGCGAAAAGACGGGTTGATGATTCGTCA
ATGAGATCAAGGAGTAAATCAAGTTCAAGAAGCCTAAAGTTTGAACCTTCAGGTGCACTT
CATACTAAAAATAACATGGAGCTAAAAAAACAAGAGAACTATGAAGCTACAAATGGAAGT
CGCACCAATTCTAAGGGCCGTGACACCTATGAATCCACCAAACATGCAATGCAACGACAT
TGGAGCCAATTAGAACAGACAGATTCGTTTGATGCTTCTGATGGCTATCACTCTCAAGAA
CTGTCACTGGCTCTCTATCTGAAAGAGGAGACAGCTTTCAAGAGGATCAACGTGGTTCAG
GATCAAATGGACAAAGTTGAATTCTCAGGACCTTTGCTATCTCAATCACATAGAGTTGAA
GAACTCCTGGAGAAACATGAGCGCCAGATCCGCCAAGCTGTTCGACGATCATGGTTCCAA
AGAGTGAGGAAAAATGGAAACTGA