Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063113
CDS Infomation

pacid=37463834 polypeptide=PGSC0003DMP400042481 locus=PGSC0003DMG400024552 ID=PGSC0003DMT400063113.v4.03 annot-version=v4.03
Sequence

ATGTTCAGGCTTAAGAAGTTGCCCTTGCATAGGAATGCTAGGAATCACTCTGTGAATCCT
GGATCTGGTGGTTATTCAAGTTCAAATCCTTTTGATTCTGACAATGAATCTGACAACAAG
GAAACTATAAAACCTGCTCGGAGAACTTCGTCAGAGCCTTCTCTAATTACCCCACATTTG
AGTACAAACCCTTTTGATGATGATGATGATATTAAACGGACTCATTCATCTGCTTACTCC
GCGACTTCAACAGAAAGAAATAGATTCAAGAATGAGTTCAGGGACTCTGGAGGATTTGAA
AACCAAACTGTACAGGAGTTGGAAAACTATGCAGTACACAAGGCTGAAGAGACAACGAAG
ACTGTTAACAATTGCCTGAGGATTGCAGAAGACATTAGACAAGATGCAACAAAAACTGTT
ATCGCCTTACATCAGCAGGGTGAACAAATTACAAGAACCCACCTAACTGCAGCTGACATT
GAACACGACCTTAGCAGAGGTGAAAAACTTTTGGGAACTCTTGGTAGCTATTTTTCTAAG
ACTTGGAAGTCTAAGAAGATACGCTCAATTACAGGGCCAGTAATTACTAGAGATGATCCA
ATTCAAAGAAGGGGTAACCACCTGGAGCAGAGAGAAAAGTTGGGGTTGAGCTCTGCACCT
AAGGAACGCTCAAGTTCACGAACACCACCTCAGGAACCTACTAATGCACTGCAGAAAGTT
GAGGTTGAGCACGCGAAGCAAGATGACGCATTATCAGATCTCAGTAACCTGTTGGGAGAG
CTCAAACATATGGCTATTGACATGGGGTCTGAAATCGAGAGGCAGAACAAATCCCTGGAT
CATTTTCAAGATGATGTAGATGAGCTCAATTTCCGAGTTAAAGGTGCCAACCAGCGTGGT
CGCCGCTTACTTGGAAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400042481
PEP Infomation

pacid=37463834 transcript=PGSC0003DMT400063113 locus=PGSC0003DMG400024552 ID=PGSC0003DMT400063113.v4.03 annot-version=v4.03
Sequence

MFRLKKLPLHRNARNHSVNPGSGGYSSSNPFDSDNESDNKETIKPARRTSSEPSLITPHL
STNPFDDDDDIKRTHSSAYSATSTERNRFKNEFRDSGGFENQTVQELENYAVHKAEETTK
TVNNCLRIAEDIRQDATKTVIALHQQGEQITRTHLTAADIEHDLSRGEKLLGTLGSYFSK
TWKSKKIRSITGPVITRDDPIQRRGNHLEQREKLGLSSAPKERSSSRTPPQEPTNALQKV
EVEHAKQDDALSDLSNLLGELKHMAIDMGSEIERQNKSLDHFQDDVDELNFRVKGANQRG
RRLLGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400063113
Transcript Infomation

pacid=37463834 locus=PGSC0003DMG400024552 ID=PGSC0003DMT400063113.v4.03 annot-version=v4.03
Sequence

ATGTTCAGGCTTAAGAAGTTGCCCTTGCATAGGAATGCTAGGAATCACTCTGTGAATCCT
GGATCTGGTGGTTATTCAAGTTCAAATCCTTTTGATTCTGACAATGAATCTGACAACAAG
GAAACTATAAAACCTGCTCGGAGAACTTCGTCAGAGCCTTCTCTAATTACCCCACATTTG
AGTACAAACCCTTTTGATGATGATGATGATATTAAACGGACTCATTCATCTGCTTACTCC
GCGACTTCAACAGAAAGAAATAGATTCAAGAATGAGTTCAGGGACTCTGGAGGATTTGAA
AACCAAACTGTACAGGAGTTGGAAAACTATGCAGTACACAAGGCTGAAGAGACAACGAAG
ACTGTTAACAATTGCCTGAGGATTGCAGAAGACATTAGACAAGATGCAACAAAAACTGTT
ATCGCCTTACATCAGCAGGGTGAACAAATTACAAGAACCCACCTAACTGCAGCTGACATT
GAACACGACCTTAGCAGAGGTGAAAAACTTTTGGGAACTCTTGGTAGCTATTTTTCTAAG
ACTTGGAAGTCTAAGAAGATACGCTCAATTACAGGGCCAGTAATTACTAGAGATGATCCA
ATTCAAAGAAGGGGTAACCACCTGGAGCAGAGAGAAAAGTTGGGGTTGAGCTCTGCACCT
AAGGAACGCTCAAGTTCACGAACACCACCTCAGGAACCTACTAATGCACTGCAGAAAGTT
GAGGTTGAGCACGCGAAGCAAGATGACGCATTATCAGATCTCAGTAACCTGTTGGGAGAG
CTCAAACATATGGCTATTGACATGGGGTCTGAAATCGAGAGGCAGAACAAATCCCTGGAT
CATTTTCAAGATGATGTAGATGAGCTCAATTTCCGAGTTAAAGGTGCCAACCAGCGTGGT
CGCCGCTTACTTGGAAAATAA