Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063110
CDS Infomation

pacid=37460169 polypeptide=PGSC0003DMP400042478 locus=PGSC0003DMG402024549 ID=PGSC0003DMT400063110.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAAAAAGACCTTACGGTGAAGAGGATTTGTATGAGGTTTCATCTAAGCAACCA
AGGCATGAACCCAGTTGTCAGCTAGTTTCAGTTTTGGAACTTTCTCGTGAATCAGTAGTT
GTGGATGCTTATGCTTCAGGTGGTGATGAGGACAACTCTTCGAAAATCTTCCCTGATGCA
AACAAGAAATTTGATAGTCACGTTGTGGCTGAAGTTCTTTTTTCTTCTGAGATGGGCATT
CATGGATCTGCTTCAAACTCTTCCTGGCCCACCAGTAGCACCAGTGAGGAAGACATCAGG
CCTGAGGCTCCTTTTCACAGATTGACGTCTCCTGAATATTACTATTTTGATCATCCGTTC
AGGGCTGCTGCTCATCACAGGGAGATATATTCTTCTCTTTTGAGTAATCCTCAAAAGATG
GTACCCATTGGACCAGATTTCCAGGCAGAGCTACCAGAATGGACACCATATAGTAATAAG
GATAAACCATGCATAGAAGGTATACATGAAACTCTGAGTCCTCCATCTCAAGCCAATGAA
AATAAACTTACTGGAAGGACTATCATTCCAATGCCTAAAATGGAGCTACTTGCAGATCAG
GTCGAGATTATTGGAGAGAGAAGAGTTGAATGTTCATGTGAAGATAAAGGTTCCATAAGA
TGTGTTCAACTAGACGTCATCGAAGCAAGGGAAAAACTAAAGCTAGCCCTTGGCGAGGAG
ACATTTGTTAGGTTGGGTTTTTGTGACATGGGAGAGGTAGTTGCAGAAAAATGGAGTGAA
GAGGAAGAGGAACTATTTCATGAGGTTGTATTGTCCAATCCTGCCTCGTTAGGCAATAAC
TTTTGGAACCATCTTGCTATTGAGTTTCCTTCACGGCGTAGGGAAGAACTTGTCAGCTAT
TATTTTAATGTCTTTATTTTGCGAAAACGTGCTGAGCAGAACAGATTTGATCCACAGAAC
ATAGACAGTGATAATGATGAGTGGCATGACACAGTTGATGATGCTGATGAGGCAACTAAA
ATGACGGATGAAGATGAGGATTCTGTGGTTGAATCTCCAGCATATCATAATGGTCTCAGC
TACAATATGATCCATGAGGAGCACGATAGACGAACATATGATGAGGATGCGCGTGAAGCA
ATATGGGAAGATTATAAGCCTGTAAATTTTGGTAGCAGTAAGGTCTTCACTGATGTGCAG
GAATCATGTCCTAGTAAGTTTTTTGATAGTAACAACAGTTGTAAAGTTGGCATGCAGCCT
CAAGACCAAGGACCATCAAGTAACGTGGTTGAGTCCTGTACCACTGATGCAGCTGGGGTT
ACTTCAGAATCATCACTAGGGAAGACCAACAATGATAATCATTGGGCAAGCGATATTGCT
GGTATGGGCAGTGGCACCAAACATGATAGTCTGTTGGAGTTGTGTAATGGCAAAGAATGG
GATGGTGGGTACTTGAGCTGTGCCAGAAATGAAATTGGTTTGGTTCCAACACCCACTATG
ATTGAAGAAGTCTTTGGTGATGGAGCCTGGATATACAAGAGCCGAGATGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042478
PEP Infomation

pacid=37460169 transcript=PGSC0003DMT400063110 locus=PGSC0003DMG402024549 ID=PGSC0003DMT400063110.v4.03 annot-version=v4.03
Sequence

MVQKRPYGEEDLYEVSSKQPRHEPSCQLVSVLELSRESVVVDAYASGGDEDNSSKIFPDA
NKKFDSHVVAEVLFSSEMGIHGSASNSSWPTSSTSEEDIRPEAPFHRLTSPEYYYFDHPF
RAAAHHREIYSSLLSNPQKMVPIGPDFQAELPEWTPYSNKDKPCIEGIHETLSPPSQANE
NKLTGRTIIPMPKMELLADQVEIIGERRVECSCEDKGSIRCVQLDVIEAREKLKLALGEE
TFVRLGFCDMGEVVAEKWSEEEEELFHEVVLSNPASLGNNFWNHLAIEFPSRRREELVSY
YFNVFILRKRAEQNRFDPQNIDSDNDEWHDTVDDADEATKMTDEDEDSVVESPAYHNGLS
YNMIHEEHDRRTYDEDAREAIWEDYKPVNFGSSKVFTDVQESCPSKFFDSNNSCKVGMQP
QDQGPSSNVVESCTTDAAGVTSESSLGKTNNDNHWASDIAGMGSGTKHDSLLELCNGKEW
DGGYLSCARNEIGLVPTPTMIEEVFGDGAWIYKSRDG*

Transcript Sequence

Transcript ID

PGSC0003DMT400063110
Transcript Infomation

pacid=37460169 locus=PGSC0003DMG402024549 ID=PGSC0003DMT400063110.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAAAAAGACCTTACGGTGAAGAGGATTTGTATGAGGTTTCATCTAAGCAACCA
AGGCATGAACCCAGTTGTCAGCTAGTTTCAGTTTTGGAACTTTCTCGTGAATCAGTAGTT
GTGGATGCTTATGCTTCAGGTGGTGATGAGGACAACTCTTCGAAAATCTTCCCTGATGCA
AACAAGAAATTTGATAGTCACGTTGTGGCTGAAGTTCTTTTTTCTTCTGAGATGGGCATT
CATGGATCTGCTTCAAACTCTTCCTGGCCCACCAGTAGCACCAGTGAGGAAGACATCAGG
CCTGAGGCTCCTTTTCACAGATTGACGTCTCCTGAATATTACTATTTTGATCATCCGTTC
AGGGCTGCTGCTCATCACAGGGAGATATATTCTTCTCTTTTGAGTAATCCTCAAAAGATG
GTACCCATTGGACCAGATTTCCAGGCAGAGCTACCAGAATGGACACCATATAGTAATAAG
GATAAACCATGCATAGAAGGTATACATGAAACTCTGAGTCCTCCATCTCAAGCCAATGAA
AATAAACTTACTGGAAGGACTATCATTCCAATGCCTAAAATGGAGCTACTTGCAGATCAG
GTCGAGATTATTGGAGAGAGAAGAGTTGAATGTTCATGTGAAGATAAAGGTTCCATAAGA
TGTGTTCAACTAGACGTCATCGAAGCAAGGGAAAAACTAAAGCTAGCCCTTGGCGAGGAG
ACATTTGTTAGGTTGGGTTTTTGTGACATGGGAGAGGTAGTTGCAGAAAAATGGAGTGAA
GAGGAAGAGGAACTATTTCATGAGGTTGTATTGTCCAATCCTGCCTCGTTAGGCAATAAC
TTTTGGAACCATCTTGCTATTGAGTTTCCTTCACGGCGTAGGGAAGAACTTGTCAGCTAT
TATTTTAATGTCTTTATTTTGCGAAAACGTGCTGAGCAGAACAGATTTGATCCACAGAAC
ATAGACAGTGATAATGATGAGTGGCATGACACAGTTGATGATGCTGATGAGGCAACTAAA
ATGACGGATGAAGATGAGGATTCTGTGGTTGAATCTCCAGCATATCATAATGGTCTCAGC
TACAATATGATCCATGAGGAGCACGATAGACGAACATATGATGAGGATGCGCGTGAAGCA
ATATGGGAAGATTATAAGCCTGTAAATTTTGGTAGCAGTAAGGTCTTCACTGATGTGCAG
GAATCATGTCCTAGTAAGTTTTTTGATAGTAACAACAGTTGTAAAGTTGGCATGCAGCCT
CAAGACCAAGGACCATCAAGTAACGTGGTTGAGTCCTGTACCACTGATGCAGCTGGGGTT
ACTTCAGAATCATCACTAGGGAAGACCAACAATGATAATCATTGGGCAAGCGATATTGCT
GGTATGGGCAGTGGCACCAAACATGATAGTCTGTTGGAGTTGTGTAATGGCAAAGAATGG
GATGGTGGGTACTTGAGCTGTGCCAGAAATGAAATTGGTTTGGTTCCAACACCCACTATG
ATTGAAGAAGTCTTTGGTGATGGAGCCTGGATATACAAGAGCCGAGATGGTTAG