Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063104
CDS Infomation

pacid=37462480 polypeptide=PGSC0003DMP400042473 locus=PGSC0003DMG400024547 ID=PGSC0003DMT400063104.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTATAGAGAATCAGAGTTTCCACTTCTTAGCTGGATCAGCAAAAATCCTTCT
GAGATGGCAGAATCCCCTCTGTTTATTCTTTCCTGTTTAATTGCTGGTTTAGTAGGAATT
TTCACTATATTTTACACAGCTTTCCAGTGGAGGAGGAACATAAATGGTAGTTGGATGAAA
GCCATAGCCAGGTCTAAGAAAAACCCCAAAACAAGGAATAAGGTCCCTGCGGCTCCTCAT
ACTTGGGCTTTGGAGACCGTTTCTCGAGGGAAAAGTTTAAAATGCTGTGTCTGTTTGAAG
TCCATTTCTCCATCTCAGACTCTTGGTCCAATTGTTGCTTCAGAAAGATTTTTTAATCGT
TGCAGCATATGTGGTGCAGCAGCTCATCTGAGTTGCTCATCGAGTGCTCACAAGGATTGT
AAATGTGCATCTATGTTTGGATACCCACATGTGGTACATCAATGGGCAGTGCGCTGGACA
GAGGTAGCTGATCAACCTGATGAATCTTATTTCTGCAGCTACTGTGAAGAGCCAAGTTCA
TTTCTTGGTGGGTCCCCTATATGGTGTTGCTTGTGGTGTCAGCAGCTAGTTCATGTTGAT
TGTCATGCCAATATGTTCAATGAAACAGGTGATATATGTGACCTGGGCCCTTTCAGAAGG
CTTATTCTATCGCCACTTTATGTGAAAGAGTTTAACAGGGGAGGACTGCTGAGTTCTATC
ACACAAGGTGCCAATGAAATTGCTTCTTCAGTCCGTGCTAGTATAATATGTCAAAGCAAG
AAATATAAGCACAGTAAAGAGAAACATGAGAGTGGGACCTCTGCAGAGACAAGCAATGGT
GATGTTGTTGGGGACACAACTACTGAATGCACTGCTGATTCTCATCAAGTGAATGGTAAT
ATAGATGAAAACTGCAGTAGTGGTGTAAATAGAGAGGGTGCGGATCAGCACCAAGACAGT
GGTGTTAAAAAGTTGATATCTATACCCAGCTTCAAAAGGAGTTCATCCATTAATCAGAAG
GATGAATCTCAATTAATAGGGCAGAAATATGAATTGACTGATTTGCCTCCAGATGCCAGA
CCTCTGCTAGTTTTTATAAACAAGAAAAGTGGAGCTCAACGAGGAGATTCACTTAGGCAG
CGGTTGAATCTTCTATTAAACCCAGTTCAGGTCGTTGAGTTGAGTTCAACAGAAGGACCG
GAAGTTGGTCTGCATCTTTTCAGAAGAGTGCCACACTTCCGGATTCTTGTCTGTGGAGGT
GATGGAACTGTTGGCTGGGTATTGGATACCATAGATAAACAAAACTATGTTTCTCCTCCA
CCGGTGGCAATACTCCCCGCCGGGACGGGAAATGATTTGGCTCGAGTTCTTTCCTGGGGA
GGCGGTTTAGGATCAGTTGAGAGACAAGGTGGTCTTTGCACACTTTTGCATGATATAGAA
CAAGCAGCAGTAACTATCCTTGATCGATGGAAAGTTTCTATAGTAAATCAGCAGGGAAAG
CTGCTTGAACCCCCAAAGTTCTTGAACAACTATCTTGGGGTTGGTTGTGATGCAAAGGTT
GCATTAGAAATCCATAATATGAGGGAGGAAAACCCCGAGAAGTTCTACAATCAGTTCATG
AACAAAGTTCTTTATGCCAGAGAAGGTGCCAGGAGTATCATGGATTGGACATTTGCGGAT
TTTCCATGGCAAGTTAGGGTGGAGGTTGATGGTGTGGAGATTGAAGTTCCCGAGGTGGTG
TCGAAAGGCTTAACTGTCCTTGTGGAAAATACATTTGAGCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400042473
PEP Infomation

pacid=37462480 transcript=PGSC0003DMT400063104 locus=PGSC0003DMG400024547 ID=PGSC0003DMT400063104.v4.03 annot-version=v4.03
Sequence

MEDYRESEFPLLSWISKNPSEMAESPLFILSCLIAGLVGIFTIFYTAFQWRRNINGSWMK
AIARSKKNPKTRNKVPAAPHTWALETVSRGKSLKCCVCLKSISPSQTLGPIVASERFFNR
CSICGAAAHLSCSSSAHKDCKCASMFGYPHVVHQWAVRWTEVADQPDESYFCSYCEEPSS
FLGGSPIWCCLWCQQLVHVDCHANMFNETGDICDLGPFRRLILSPLYVKEFNRGGLLSSI
TQGANEIASSVRASIICQSKKYKHSKEKHESGTSAETSNGDVVGDTTTECTADSHQVNGN
IDENCSSGVNREGADQHQDSGVKKLISIPSFKRSSSINQKDESQLIGQKYELTDLPPDAR
PLLVFINKKSGAQRGDSLRQRLNLLLNPVQVVELSSTEGPEVGLHLFRRVPHFRILVCGG
DGTVGWVLDTIDKQNYVSPPPVAILPAGTGNDLARVLSWGGGLGSVERQGGLCTLLHDIE
QAAVTILDRWKVSIVNQQGKLLEPPKFLNNYLGVGCDAKVALEIHNMREENPEKFYNQFM
NKVLYAREGARSIMDWTFADFPWQVRVEVDGVEIEVPEVVSKGLTVLVENTFEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400063104
Transcript Infomation

pacid=37462480 locus=PGSC0003DMG400024547 ID=PGSC0003DMT400063104.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTATAGAGAATCAGAGTTTCCACTTCTTAGCTGGATCAGCAAAAATCCTTCT
GAGATGGCAGAATCCCCTCTGTTTATTCTTTCCTGTTTAATTGCTGGTTTAGTAGGAATT
TTCACTATATTTTACACAGCTTTCCAGTGGAGGAGGAACATAAATGGTAGTTGGATGAAA
GCCATAGCCAGGTCTAAGAAAAACCCCAAAACAAGGAATAAGGTCCCTGCGGCTCCTCAT
ACTTGGGCTTTGGAGACCGTTTCTCGAGGGAAAAGTTTAAAATGCTGTGTCTGTTTGAAG
TCCATTTCTCCATCTCAGACTCTTGGTCCAATTGTTGCTTCAGAAAGATTTTTTAATCGT
TGCAGCATATGTGGTGCAGCAGCTCATCTGAGTTGCTCATCGAGTGCTCACAAGGATTGT
AAATGTGCATCTATGTTTGGATACCCACATGTGGTACATCAATGGGCAGTGCGCTGGACA
GAGGTAGCTGATCAACCTGATGAATCTTATTTCTGCAGCTACTGTGAAGAGCCAAGTTCA
TTTCTTGGTGGGTCCCCTATATGGTGTTGCTTGTGGTGTCAGCAGCTAGTTCATGTTGAT
TGTCATGCCAATATGTTCAATGAAACAGGTGATATATGTGACCTGGGCCCTTTCAGAAGG
CTTATTCTATCGCCACTTTATGTGAAAGAGTTTAACAGGGGAGGACTGCTGAGTTCTATC
ACACAAGGTGCCAATGAAATTGCTTCTTCAGTCCGTGCTAGTATAATATGTCAAAGCAAG
AAATATAAGCACAGTAAAGAGAAACATGAGAGTGGGACCTCTGCAGAGACAAGCAATGGT
GATGTTGTTGGGGACACAACTACTGAATGCACTGCTGATTCTCATCAAGTGAATGGTAAT
ATAGATGAAAACTGCAGTAGTGGTGTAAATAGAGAGGGTGCGGATCAGCACCAAGACAGT
GGTGTTAAAAAGTTGATATCTATACCCAGCTTCAAAAGGAGTTCATCCATTAATCAGAAG
GATGAATCTCAATTAATAGGGCAGAAATATGAATTGACTGATTTGCCTCCAGATGCCAGA
CCTCTGCTAGTTTTTATAAACAAGAAAAGTGGAGCTCAACGAGGAGATTCACTTAGGCAG
CGGTTGAATCTTCTATTAAACCCAGTTCAGGTCGTTGAGTTGAGTTCAACAGAAGGACCG
GAAGTTGGTCTGCATCTTTTCAGAAGAGTGCCACACTTCCGGATTCTTGTCTGTGGAGGT
GATGGAACTGTTGGCTGGGTATTGGATACCATAGATAAACAAAACTATGTTTCTCCTCCA
CCGGTGGCAATACTCCCCGCCGGGACGGGAAATGATTTGGCTCGAGTTCTTTCCTGGGGA
GGCGGTTTAGGATCAGTTGAGAGACAAGGTGGTCTTTGCACACTTTTGCATGATATAGAA
CAAGCAGCAGTAACTATCCTTGATCGATGGAAAGTTTCTATAGTAAATCAGCAGGGAAAG
CTGCTTGAACCCCCAAAGTTCTTGAACAACTATCTTGGGGTTGGTTGTGATGCAAAGGTT
GCATTAGAAATCCATAATATGAGGGAGGAAAACCCCGAGAAGTTCTACAATCAGTTCATG
AACAAAGTTCTTTATGCCAGAGAAGGTGCCAGGAGTATCATGGATTGGACATTTGCGGAT
TTTCCATGGCAAGTTAGGGTGGAGGTTGATGGTGTGGAGATTGAAGTTCCCGAGGTGGTG
TCGAAAGGCTTAACTGTCCTTGTGGAAAATACATTTGAGCTATGA