Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063083
CDS Infomation

pacid=37462412 polypeptide=PGSC0003DMP400042458 locus=PGSC0003DMG400024539 ID=PGSC0003DMT400063083.v4.03 annot-version=v4.03
Sequence

ATGGAGGACGATAAATCGGCGGATCAACATGTAATTGCTGCAGCTCATCACCTTGTGAAG
GCGTTAAAAGACAGGACAAGCTTGAGCGATGAAGTTAGAAGAACTCTAGCCGATCTTGAC
ATTCATTTGGCTGCAATGACTGAAGCAAAAGAGGATGAGACCACAAGTTTCAGAGAGATT
GAAGGTCGGTTTAAGTCAGCTCAGGCAAAGATCATGTCCTTGCAGTCAAATTGTTTGAAG
ATATGGGATACTGGTCCTTCTAATCAACTTCTTGAGTATCTGCAAAATGTAGAAGAAGTT
CGGAGTATAATAGTGAGCTTGGAAAGTATGGTGCCAAACAAGTACAGGAAACAAAGCAGA
CTTACTAACCAAGCTCACAGTGCGTTGCAAATTGCAATGGTAAGGCTGCAGGAAGAAGTT
GTCAATATTCTTGCGCAGAGTAAGCAGTGTTTTGGGCATGCATATGTGTCGTTCCAATCT
TGTGAAGAGATAGCCGTTGATGAGGAGACGATGGTCTCAATTGAGGATGACTCAGTTGAG
GGAACATCTTGTCTGGATAGTAGTAGAGCTGAATCAGAAGAATGTATAATAATGGATTTG
GTCCATCCAGGTGTTGTTCCTTACATCAAGTCCATTGCAGATCTGATGTTCGCTTCACAT
TATGTTCAGGAATTTTGCCAAGTTTTTATCAGATTCTGGAAAGATGCATTGTATGAATAC
TTGGGGCTTTTCTGTATGCAACAAATCAGCATTGAAGATGTGCTGAGAATGGACTGGGCA
AGCTTGAATTGCAGGATTAAGAAGTGGCGTCAGGCAACGAAGAATGTCATTGCATTCTAT
CTCCCTAGTGAGAAAAACCTCTTTGATCAGATTCTTTGTGAGTTTGGATCTGTTAGTTCA
ACATGTTTCATTGAGGTTTCAAAGGATGCCATGATGTGTCTTTTGAATTTTGGCCAAGCT
GTAGCTATTGGCCCCCTTCTACCAGAACGTCTTTTTTGTTTACTCGACATGTATGAGCTT
CTAAGAGGTCTTTGTCAAGATGTGGATGCATTGTTTTGTGAAAAGCATGGTAATTCCATT
CAAGTGGAGTACCATGAACTCATGAAAAAACTTGGAGATTCTGCAAAAGCAATCTTTCTG
GGGTTGGGGAATCGTATTGCTTCAAACACTTCAACAACTCCCTTCCAAGGAGGAGGTGTT
CATCCTCTGACCAAGTATGTTATCAATTATTTCATGCTTCTGTCAGAATATAATGTTACC
CTGAGATTCCTTTTAGAGGACAGAGAGGTAGAGAATTCGGGTGAAGTTGTCGATGCACTG
GTCAGGCTCGACATTTCATCCGAATTCCCATGTCCACTGGCTCTTCACTTGCAGTCAATA
ACATCCAGGCTCGAATCCAACCTTGAAGATAGGTCCAATTTATATAAAGATGATTCTTTG
AAGCACATCTTTTTGATGAACAACATCCATTACATAGTCCAGAAAATCAAGAATTCCAAA
CTCAGAACCTGTTTTGGTGATGAGTGGATAAAAATACATATTGTAAAATATGTGCAGCAC
GAAAAAAGCTATGAGAGAAAAACATGGAGTTCAATCATATCTTTGATAACCGGTTATGAG
AAGTCCGGGAAGGCAGTTCTGAAGGAGAGGTGCAGAAATTTCAGTATTGCTTTTGAGGAT
GTGTATAAGAACCAGACAGGATGGACTATTCCAGATATTGATCTTCGAGATGATTTGAAT
AGTGCAATCGGGTTAAGGGTCGTTCATGCCTACCGTACATTTGCTGGACAGGTGAGAAAA
TCTCTCAGTGAAAAGTACATCAAATACACAGAAGAGGACTTGGTAGAGTATCTCCTGGAC
TTTTTTCAAGGTTCAGCGAAGTCTCTTAATCATCATTGGAGGAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042458
PEP Infomation

pacid=37462412 transcript=PGSC0003DMT400063083 locus=PGSC0003DMG400024539 ID=PGSC0003DMT400063083.v4.03 annot-version=v4.03
Sequence

MEDDKSADQHVIAAAHHLVKALKDRTSLSDEVRRTLADLDIHLAAMTEAKEDETTSFREI
EGRFKSAQAKIMSLQSNCLKIWDTGPSNQLLEYLQNVEEVRSIIVSLESMVPNKYRKQSR
LTNQAHSALQIAMVRLQEEVVNILAQSKQCFGHAYVSFQSCEEIAVDEETMVSIEDDSVE
GTSCLDSSRAESEECIIMDLVHPGVVPYIKSIADLMFASHYVQEFCQVFIRFWKDALYEY
LGLFCMQQISIEDVLRMDWASLNCRIKKWRQATKNVIAFYLPSEKNLFDQILCEFGSVSS
TCFIEVSKDAMMCLLNFGQAVAIGPLLPERLFCLLDMYELLRGLCQDVDALFCEKHGNSI
QVEYHELMKKLGDSAKAIFLGLGNRIASNTSTTPFQGGGVHPLTKYVINYFMLLSEYNVT
LRFLLEDREVENSGEVVDALVRLDISSEFPCPLALHLQSITSRLESNLEDRSNLYKDDSL
KHIFLMNNIHYIVQKIKNSKLRTCFGDEWIKIHIVKYVQHEKSYERKTWSSIISLITGYE
KSGKAVLKERCRNFSIAFEDVYKNQTGWTIPDIDLRDDLNSAIGLRVVHAYRTFAGQVRK
SLSEKYIKYTEEDLVEYLLDFFQGSAKSLNHHWRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400063083
Transcript Infomation

pacid=37462412 locus=PGSC0003DMG400024539 ID=PGSC0003DMT400063083.v4.03 annot-version=v4.03
Sequence

ATGGAGGACGATAAATCGGCGGATCAACATGTAATTGCTGCAGCTCATCACCTTGTGAAG
GCGTTAAAAGACAGGACAAGCTTGAGCGATGAAGTTAGAAGAACTCTAGCCGATCTTGAC
ATTCATTTGGCTGCAATGACTGAAGCAAAAGAGGATGAGACCACAAGTTTCAGAGAGATT
GAAGGTCGGTTTAAGTCAGCTCAGGCAAAGATCATGTCCTTGCAGTCAAATTGTTTGAAG
ATATGGGATACTGGTCCTTCTAATCAACTTCTTGAGTATCTGCAAAATGTAGAAGAAGTT
CGGAGTATAATAGTGAGCTTGGAAAGTATGGTGCCAAACAAGTACAGGAAACAAAGCAGA
CTTACTAACCAAGCTCACAGTGCGTTGCAAATTGCAATGGTAAGGCTGCAGGAAGAAGTT
GTCAATATTCTTGCGCAGAGTAAGCAGTGTTTTGGGCATGCATATGTGTCGTTCCAATCT
TGTGAAGAGATAGCCGTTGATGAGGAGACGATGGTCTCAATTGAGGATGACTCAGTTGAG
GGAACATCTTGTCTGGATAGTAGTAGAGCTGAATCAGAAGAATGTATAATAATGGATTTG
GTCCATCCAGGTGTTGTTCCTTACATCAAGTCCATTGCAGATCTGATGTTCGCTTCACAT
TATGTTCAGGAATTTTGCCAAGTTTTTATCAGATTCTGGAAAGATGCATTGTATGAATAC
TTGGGGCTTTTCTGTATGCAACAAATCAGCATTGAAGATGTGCTGAGAATGGACTGGGCA
AGCTTGAATTGCAGGATTAAGAAGTGGCGTCAGGCAACGAAGAATGTCATTGCATTCTAT
CTCCCTAGTGAGAAAAACCTCTTTGATCAGATTCTTTGTGAGTTTGGATCTGTTAGTTCA
ACATGTTTCATTGAGGTTTCAAAGGATGCCATGATGTGTCTTTTGAATTTTGGCCAAGCT
GTAGCTATTGGCCCCCTTCTACCAGAACGTCTTTTTTGTTTACTCGACATGTATGAGCTT
CTAAGAGGTCTTTGTCAAGATGTGGATGCATTGTTTTGTGAAAAGCATGGTAATTCCATT
CAAGTGGAGTACCATGAACTCATGAAAAAACTTGGAGATTCTGCAAAAGCAATCTTTCTG
GGGTTGGGGAATCGTATTGCTTCAAACACTTCAACAACTCCCTTCCAAGGAGGAGGTGTT
CATCCTCTGACCAAGTATGTTATCAATTATTTCATGCTTCTGTCAGAATATAATGTTACC
CTGAGATTCCTTTTAGAGGACAGAGAGGTAGAGAATTCGGGTGAAGTTGTCGATGCACTG
GTCAGGCTCGACATTTCATCCGAATTCCCATGTCCACTGGCTCTTCACTTGCAGTCAATA
ACATCCAGGCTCGAATCCAACCTTGAAGATAGGTCCAATTTATATAAAGATGATTCTTTG
AAGCACATCTTTTTGATGAACAACATCCATTACATAGTCCAGAAAATCAAGAATTCCAAA
CTCAGAACCTGTTTTGGTGATGAGTGGATAAAAATACATATTGTAAAATATGTGCAGCAC
GAAAAAAGCTATGAGAGAAAAACATGGAGTTCAATCATATCTTTGATAACCGGTTATGAG
AAGTCCGGGAAGGCAGTTCTGAAGGAGAGGTGCAGAAATTTCAGTATTGCTTTTGAGGAT
GTGTATAAGAACCAGACAGGATGGACTATTCCAGATATTGATCTTCGAGATGATTTGAAT
AGTGCAATCGGGTTAAGGGTCGTTCATGCCTACCGTACATTTGCTGGACAGGTGAGAAAA
TCTCTCAGTGAAAAGTACATCAAATACACAGAAGAGGACTTGGTAGAGTATCTCCTGGAC
TTTTTTCAAGGTTCAGCGAAGTCTCTTAATCATCATTGGAGGAGGTGA