Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063076
CDS Infomation

pacid=37463335 polypeptide=PGSC0003DMP400042454 locus=PGSC0003DMG400024535 ID=PGSC0003DMT400063076.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCAAGCTTTTACATTCATTGACTGAAGATAATCAAGATCTGCAAAAGCAAATT
GGATGTATGACAGGGATTTTGCACATATTTGATCGTCAAAGTATGCTTGCTAGTAGGCGC
CTAATCGGCAACAGCCCCAGAAGGCTCACTTCTGGCAGCTCTCATATTGGCAGTGGTGCT
TCTGAGAAAGAGTACACTAGCACATATCAAAGATCACCAGCTATGGAAAGCCACACAAAC
AAGACTGTGCAAGATAAACAAAGATTGTCTACAGAATCGTCGAGACCATCATTCTCATCT
TCTTCACGTTCGTCTTCCTTTTCTTCTCTTGATTGTAATAAAACAAGTCAACAAGAGCCC
TTAGCTTTTGATCGACTAAGTTTTGCTGAAACTCCTTCAAGAGAACCAGCTACAGGCCAA
CCAAATGCATCACCACAATTTGGTAGGCAATCTCTTGACATTCGGGATGTGGTTAAGGAT
TCTATGAACAGAGAAGCTCAGAGGTTCTCAGCTGGACCTGCAGTGAAAGAAGAGGTGACA
GAATCGATGTCGAAGCCCGGGGACTCCCCAAGGCCAGTTCAGACTTTGAAAAACTTTGAT
GGGGCTTATGATTCGGGCCCAAATGGGAAGCAGAATTTGTCTGTTGATCTTAAGGAATCT
CTCAGAGTTCTTGCTAAACTTCGGGAAGCTCCTTGGTACTCAAGTGAACATAGGGAACTT
ACAAGATCATTATCATATCATTCAAAGGACACTTCTACATTATCAGTCTCGAAAGATGCT
CCTCGTTTCTCTTATGATGGGAGAGAAACAAATCATGTACCCTTTGAACAGCGAGACATT
TCCAAATCCACTCTTAAGCTTAAAGAGCTGCCAAGACTTTCCTTGGACAGTAGAGTTAGT
CCAGTACGAAGCTTGAACTCAGAACCAAAATCTAACTTCTCCTCAAAATCTATGCAGAAG
GATAGTGGTAATACCAATGCAAAGTCACCAACTATGCAGCAAACATCAGGGATTCCGGCT
CGTCCTCCTAGTGTTGTGGCAAAGCTAATGGGTCTTGATACACTACCTGGTGCCATGTCA
TCAACTGACAGCAAGATGGGGTTGAGCACTTCTTCACAAGTTGAAGAACCTGTTTCTTTT
CCAAGATCTTCAGAAGTATCTGATCCGTACAAACCTATCCGAACATCTAATACCTCTAAG
AACCTGTGGAAAGAACCTACTTCTCCTAAGTGGAGAAACCCTGATATGGCTATGAAACCT
ATATCCAGGTTTCCCATTGAACCAGCACCCTGGAAGCAACCTGATAGGACTCGAGTGTAT
GAGAAACCGATATCCAGGACAACAAAAACTCCAGTAAAGCCTGCCCACCCCTTTCCTTCT
GTTTACAGTGAGATAGAAAAGAGATGGAAGGATCTAGAATTCACCCATTCAGGCAAGGAT
CTAAGAGCTCTTAAACAGATATTGGAAGCAATGCAGGCAAAGGGCCTCCTAGAGACAGAA
AAAGAGGAGCAGGATTCAAATTTTACTGGTCAGAAAGAGCATCACCAGAAGATTGCAAGT
CCTGCACAGAGTGCAAAACTGGCAAACCAGAGAATGAGGCAGACTGATCAAGTGACTGCT
CCAACAAAGAGAGGGATAAATTCTTCAAGGAATTTTGAATCCCCAATAGTTATCATGAAG
CCAGCAAAATTAATGGAAAAATCTGATATTCCTTCTTCTTCGATGATTCCACTTCATGGT
GGTGACTCTGTCAGTAGAAAGGGTAATGCTATGAGCAGGGCTGCTAAAGAACATCAACCT
AGAACTAGTTATGGAAGCAGTCCAGTGAATCCCAATGAAACAAGAAGAACTTCGAAACCT
CCACAGATTTCAACAAGGTCCCAACAGCTTCCTAAAGAGATCATCTCAGGCTCAATAAAG
AGCTCAGGATCCATCAGTCCAAGATTGCAACAGAATAAACTGGAGCTAGAGAAAAGATCT
CGGCCGCCCACACCTCCATCTGATTCCAACAGATCGAGGAGACAGTCAAACAAGCAACAT
ACAGAGGCTAGTTCCCCAGGCGGAAGACGAAGGCCAAGAATTTCAAACATCCAGCAACAT
GATGAACATGTGAGTGAGATCAGTAGTGAATCAAGGAATTTGAGTTGCCATGGGAATAAA
ATTTCTGGTCAATCCAAAGGGAATGTGGTAGCAGAATCAAAAGTGGATTTCGAAGTCACT
AGTTTCGAGCGCTCACTTGAGATGACAAGCAGCCCGAGTTCATCTATTGATGCATCCAAT
TACCTGAGATGTGACTTGGTAGAGAAGAAATCAATTCGGGTGTTCTCTGAGGATGAAATG
TTAACTGAACCTGCTCCAGAGTATCCAAGTCCGGTCTCGGTTCTTGATAATGCTGTATAT
ATGGATGAATCACCCTCTCCTGTGAAGCATACTCCAAAAGTCATGAAAGATGAAAACTGC
AACACTGCTGATAAATTTTCCAGTCTGCCACAGTGTGATCGATCTAATACTCTTGTGATT
GATGCCACCAGTTCTGGTCTCTCCTCAGAAATCAATAGAAAAAAGTTGCAAAACATTGAG
AATTTAGTTGAGAAGCTCAGGAGATTGAACTCCAACCATGATGAGGCTCGGACGGATTAC
ATTGCGTCTCTCTGTGAGAACACAAACCCTGATCACAGATACATTTCAGAGATCTTATTG
GCTTCAGGACTCCTTCTCAGGGATCTCGGCACAAGCCTGACAAGTTTCCAGTTCCATCCA
TCAGGTCACCCAATCAACCCTGAGCTCTTCCTAGTCTTGGAACAAACCAAGGCAAGCACT
TTACTTAAGGAAGAATTCTGCAATGATAAGATGAGGCAGTCGAATCCAAAGGAAAAGATA
CGTAGGAAACTCATCTTTGATGTTGTTAATGAGAGTCTTGCTGGAAAATTAGTGCTAGTG
GGACCTTCGTACGAGCCATGGTTGATGTCCCAGAAGCTAGCAAAGAGCACCCTGAATGCT
CAAAGGCTTCTAAGGGACTTGTGCTCAGAGATAGAACAACTTCAAGCTAAACCATCAAAA
TGCAACATGGAGGATGAGGAGGATGAGTGGAAAAACATACTGCTGGATGACGTGGTGCAT
CGTTCAGAGAGTTGGACAGTTTTCACAGGTGAGATATCGAGTGTAGTCCTAGACGTGGAG
CGGATGATCTTTAAAGATTTAGTTGATGAGATAGTGAGAGGTGATGGTTCTGGTTTGAGA
GCAAAACCAACTAGGCGTAGACAGCTCTTTGCAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042454
PEP Infomation

pacid=37463335 transcript=PGSC0003DMT400063076 locus=PGSC0003DMG400024535 ID=PGSC0003DMT400063076.v4.03 annot-version=v4.03
Sequence

MAAKLLHSLTEDNQDLQKQIGCMTGILHIFDRQSMLASRRLIGNSPRRLTSGSSHIGSGA
SEKEYTSTYQRSPAMESHTNKTVQDKQRLSTESSRPSFSSSSRSSSFSSLDCNKTSQQEP
LAFDRLSFAETPSREPATGQPNASPQFGRQSLDIRDVVKDSMNREAQRFSAGPAVKEEVT
ESMSKPGDSPRPVQTLKNFDGAYDSGPNGKQNLSVDLKESLRVLAKLREAPWYSSEHREL
TRSLSYHSKDTSTLSVSKDAPRFSYDGRETNHVPFEQRDISKSTLKLKELPRLSLDSRVS
PVRSLNSEPKSNFSSKSMQKDSGNTNAKSPTMQQTSGIPARPPSVVAKLMGLDTLPGAMS
STDSKMGLSTSSQVEEPVSFPRSSEVSDPYKPIRTSNTSKNLWKEPTSPKWRNPDMAMKP
ISRFPIEPAPWKQPDRTRVYEKPISRTTKTPVKPAHPFPSVYSEIEKRWKDLEFTHSGKD
LRALKQILEAMQAKGLLETEKEEQDSNFTGQKEHHQKIASPAQSAKLANQRMRQTDQVTA
PTKRGINSSRNFESPIVIMKPAKLMEKSDIPSSSMIPLHGGDSVSRKGNAMSRAAKEHQP
RTSYGSSPVNPNETRRTSKPPQISTRSQQLPKEIISGSIKSSGSISPRLQQNKLELEKRS
RPPTPPSDSNRSRRQSNKQHTEASSPGGRRRPRISNIQQHDEHVSEISSESRNLSCHGNK
ISGQSKGNVVAESKVDFEVTSFERSLEMTSSPSSSIDASNYLRCDLVEKKSIRVFSEDEM
LTEPAPEYPSPVSVLDNAVYMDESPSPVKHTPKVMKDENCNTADKFSSLPQCDRSNTLVI
DATSSGLSSEINRKKLQNIENLVEKLRRLNSNHDEARTDYIASLCENTNPDHRYISEILL
ASGLLLRDLGTSLTSFQFHPSGHPINPELFLVLEQTKASTLLKEEFCNDKMRQSNPKEKI
RRKLIFDVVNESLAGKLVLVGPSYEPWLMSQKLAKSTLNAQRLLRDLCSEIEQLQAKPSK
CNMEDEEDEWKNILLDDVVHRSESWTVFTGEISSVVLDVERMIFKDLVDEIVRGDGSGLR
AKPTRRRQLFAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400063076
Transcript Infomation

pacid=37463335 locus=PGSC0003DMG400024535 ID=PGSC0003DMT400063076.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCAAGCTTTTACATTCATTGACTGAAGATAATCAAGATCTGCAAAAGCAAATT
GGATGTATGACAGGGATTTTGCACATATTTGATCGTCAAAGTATGCTTGCTAGTAGGCGC
CTAATCGGCAACAGCCCCAGAAGGCTCACTTCTGGCAGCTCTCATATTGGCAGTGGTGCT
TCTGAGAAAGAGTACACTAGCACATATCAAAGATCACCAGCTATGGAAAGCCACACAAAC
AAGACTGTGCAAGATAAACAAAGATTGTCTACAGAATCGTCGAGACCATCATTCTCATCT
TCTTCACGTTCGTCTTCCTTTTCTTCTCTTGATTGTAATAAAACAAGTCAACAAGAGCCC
TTAGCTTTTGATCGACTAAGTTTTGCTGAAACTCCTTCAAGAGAACCAGCTACAGGCCAA
CCAAATGCATCACCACAATTTGGTAGGCAATCTCTTGACATTCGGGATGTGGTTAAGGAT
TCTATGAACAGAGAAGCTCAGAGGTTCTCAGCTGGACCTGCAGTGAAAGAAGAGGTGACA
GAATCGATGTCGAAGCCCGGGGACTCCCCAAGGCCAGTTCAGACTTTGAAAAACTTTGAT
GGGGCTTATGATTCGGGCCCAAATGGGAAGCAGAATTTGTCTGTTGATCTTAAGGAATCT
CTCAGAGTTCTTGCTAAACTTCGGGAAGCTCCTTGGTACTCAAGTGAACATAGGGAACTT
ACAAGATCATTATCATATCATTCAAAGGACACTTCTACATTATCAGTCTCGAAAGATGCT
CCTCGTTTCTCTTATGATGGGAGAGAAACAAATCATGTACCCTTTGAACAGCGAGACATT
TCCAAATCCACTCTTAAGCTTAAAGAGCTGCCAAGACTTTCCTTGGACAGTAGAGTTAGT
CCAGTACGAAGCTTGAACTCAGAACCAAAATCTAACTTCTCCTCAAAATCTATGCAGAAG
GATAGTGGTAATACCAATGCAAAGTCACCAACTATGCAGCAAACATCAGGGATTCCGGCT
CGTCCTCCTAGTGTTGTGGCAAAGCTAATGGGTCTTGATACACTACCTGGTGCCATGTCA
TCAACTGACAGCAAGATGGGGTTGAGCACTTCTTCACAAGTTGAAGAACCTGTTTCTTTT
CCAAGATCTTCAGAAGTATCTGATCCGTACAAACCTATCCGAACATCTAATACCTCTAAG
AACCTGTGGAAAGAACCTACTTCTCCTAAGTGGAGAAACCCTGATATGGCTATGAAACCT
ATATCCAGGTTTCCCATTGAACCAGCACCCTGGAAGCAACCTGATAGGACTCGAGTGTAT
GAGAAACCGATATCCAGGACAACAAAAACTCCAGTAAAGCCTGCCCACCCCTTTCCTTCT
GTTTACAGTGAGATAGAAAAGAGATGGAAGGATCTAGAATTCACCCATTCAGGCAAGGAT
CTAAGAGCTCTTAAACAGATATTGGAAGCAATGCAGGCAAAGGGCCTCCTAGAGACAGAA
AAAGAGGAGCAGGATTCAAATTTTACTGGTCAGAAAGAGCATCACCAGAAGATTGCAAGT
CCTGCACAGAGTGCAAAACTGGCAAACCAGAGAATGAGGCAGACTGATCAAGTGACTGCT
CCAACAAAGAGAGGGATAAATTCTTCAAGGAATTTTGAATCCCCAATAGTTATCATGAAG
CCAGCAAAATTAATGGAAAAATCTGATATTCCTTCTTCTTCGATGATTCCACTTCATGGT
GGTGACTCTGTCAGTAGAAAGGGTAATGCTATGAGCAGGGCTGCTAAAGAACATCAACCT
AGAACTAGTTATGGAAGCAGTCCAGTGAATCCCAATGAAACAAGAAGAACTTCGAAACCT
CCACAGATTTCAACAAGGTCCCAACAGCTTCCTAAAGAGATCATCTCAGGCTCAATAAAG
AGCTCAGGATCCATCAGTCCAAGATTGCAACAGAATAAACTGGAGCTAGAGAAAAGATCT
CGGCCGCCCACACCTCCATCTGATTCCAACAGATCGAGGAGACAGTCAAACAAGCAACAT
ACAGAGGCTAGTTCCCCAGGCGGAAGACGAAGGCCAAGAATTTCAAACATCCAGCAACAT
GATGAACATGTGAGTGAGATCAGTAGTGAATCAAGGAATTTGAGTTGCCATGGGAATAAA
ATTTCTGGTCAATCCAAAGGGAATGTGGTAGCAGAATCAAAAGTGGATTTCGAAGTCACT
AGTTTCGAGCGCTCACTTGAGATGACAAGCAGCCCGAGTTCATCTATTGATGCATCCAAT
TACCTGAGATGTGACTTGGTAGAGAAGAAATCAATTCGGGTGTTCTCTGAGGATGAAATG
TTAACTGAACCTGCTCCAGAGTATCCAAGTCCGGTCTCGGTTCTTGATAATGCTGTATAT
ATGGATGAATCACCCTCTCCTGTGAAGCATACTCCAAAAGTCATGAAAGATGAAAACTGC
AACACTGCTGATAAATTTTCCAGTCTGCCACAGTGTGATCGATCTAATACTCTTGTGATT
GATGCCACCAGTTCTGGTCTCTCCTCAGAAATCAATAGAAAAAAGTTGCAAAACATTGAG
AATTTAGTTGAGAAGCTCAGGAGATTGAACTCCAACCATGATGAGGCTCGGACGGATTAC
ATTGCGTCTCTCTGTGAGAACACAAACCCTGATCACAGATACATTTCAGAGATCTTATTG
GCTTCAGGACTCCTTCTCAGGGATCTCGGCACAAGCCTGACAAGTTTCCAGTTCCATCCA
TCAGGTCACCCAATCAACCCTGAGCTCTTCCTAGTCTTGGAACAAACCAAGGCAAGCACT
TTACTTAAGGAAGAATTCTGCAATGATAAGATGAGGCAGTCGAATCCAAAGGAAAAGATA
CGTAGGAAACTCATCTTTGATGTTGTTAATGAGAGTCTTGCTGGAAAATTAGTGCTAGTG
GGACCTTCGTACGAGCCATGGTTGATGTCCCAGAAGCTAGCAAAGAGCACCCTGAATGCT
CAAAGGCTTCTAAGGGACTTGTGCTCAGAGATAGAACAACTTCAAGCTAAACCATCAAAA
TGCAACATGGAGGATGAGGAGGATGAGTGGAAAAACATACTGCTGGATGACGTGGTGCAT
CGTTCAGAGAGTTGGACAGTTTTCACAGGTGAGATATCGAGTGTAGTCCTAGACGTGGAG
CGGATGATCTTTAAAGATTTAGTTGATGAGATAGTGAGAGGTGATGGTTCTGGTTTGAGA
GCAAAACCAACTAGGCGTAGACAGCTCTTTGCAAAGTAG