Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063067
CDS Infomation

pacid=37462484 polypeptide=PGSC0003DMP400042448 locus=PGSC0003DMG400024532 ID=PGSC0003DMT400063067.v4.03 annot-version=v4.03
Sequence

ATGGACGGCCATTCAGGAATGCATGGCCATGGTTTCGGTAATGCCAGAACTCCTTTGTTA
GACAGACATGCCTTAGGGAGAAAGAGAAATGATGCTGGAGATGGTCAGCTGGGAGACCTT
GAGCATGGTGATTCTGTTCCGGCACCAAATGTTGGATTTGGCAGAGTTATTTCACTTGCA
AAGCCTGAAGCAGGAAATTTGGTATTAGCCACAATTGCTTTGCTGTTTGCAGCAACATCA
AGCATTTTGATTCCAAAATTTGGGGGAAAGATAATTGATATTGTTTCAGGTGATATCCAA
ACACCTGAACAGAAGTCAGAAGCTTTAAATGCAGTCAAGAACACAATACTTGAAATCTTT
CTGATTGTCATCGTCGGTTCTGTTTGCACAGCACTTCGAGCATGGTTATTTTCTTCTGCT
AGTGAAAGGGTTGTAGCCAGGTTGAGAAAGAACTTGCTAAGTCACCTTGTTCACCAGGAG
ATAGCTTTCTTTGATGTTACTCGAACTGGGGAGCTCCTCAGTAGGCTATCTGAAGATACC
CAGATCATAAAGAATGCTGCAACTACTAATCTTTCAGAGGCTTTGAGGAATCTTGCTACT
GCATTTATTGGTCTTGGGTTTATGTTTCAAACATCATGGAAATTAACATTGTTGTCGCTA
GCTGTTGTACCAGTCATATCAGTTGCAGTACGCAGATTTGGTCGCTACATGCGTGAGCTT
TCCCACAAAACTCAAGCTGCTGCAGCAGTAGCCTCGTCCATTGCTGAGGAAACTTTTGGC
GCCATACGCACAGTGAGATCATTTGCGCAGGAAGATTACGAGATTTCACGCTATTCGGAG
AAAGTTGATGAGACCTTAAATCTTGGGCTTGGACAAGCTAAAGTGGTTGGCCTTTTCTCT
GGAAGCTTAAATGCTGCATCTACTCTATCAGTTATTGTAGTAGTAATATATGGAGCCACT
CTGACTATCCAAGGCGCTATGACACCTGGAGCTCTTACATCCTTTATACTCTACAGCTTA
ACAGTTGGATCATCCGTATCTGGACTTTCTGGATTATATACTGTAGCAATGAAAGCTGCT
GGAGCCAGCAGACGGGTTTTTCAGATCTTGGATCGCACATCATCCATGCCAAAATCAGGA
GACCTATGTCCATTGGGTGATCAAGCTGCAGAGGTTGAACTGGATGATGTCTGGTTTGCC
TATCCATCACGTCCTAGCCACATGGTCCTCAAGGGTATAACAATGAAACTACAATCTGGT
TCAAAGGTTGCACTGGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAATTTGATA
GAGAGATTCTATGATCCTGTTAAAGGGAAGATCTTGCTCAATGGGGTTTCTCTGGTTGAA
ATATCTCATAAGCACCTACACCATAAGGTTAGTATAGTGAGCCAGGAACCTGTTCTTTTC
AACTGTTCCATCGAAGAAAATATTGCCTATGGATTGGGCAGCAAAGCAAGCAGTGAAGAT
ATAGAAAAAGCAGCTAAAATGGCTAATGCTCATGAATTTGTATCCAAATTTCCCGAAAAA
TATCAAACCCATGTCGGAGAACGAGGATTGAGACTTTCTGGTGGTCAGAAACAGAGAATT
GCCATAGCTAGAGCACTGCTGATGAACCCTACAATTTTATTGTTGGATGAGGCCACGAGT
GCTCTGGATGCTGAAAGTGAATATCTAGTTCAGGATGCCATGGATTCCCTGATGAAAGGT
AGAACCGTTCTTGTCATAGCTCACAGGCTTTCAACAGTCAAGAGCGCGAATACTGTAGCT
GTTGTTTCGGATGGTCAAATAGTGGAAAGTGGCACACATGATGACCTTCTGAACAAGAAC
GGGATCTACACAGCACTTGTGAGGAGGCAGTTGCAGGGATACAAATCTGATAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042448
PEP Infomation

pacid=37462484 transcript=PGSC0003DMT400063067 locus=PGSC0003DMG400024532 ID=PGSC0003DMT400063067.v4.03 annot-version=v4.03
Sequence

MDGHSGMHGHGFGNARTPLLDRHALGRKRNDAGDGQLGDLEHGDSVPAPNVGFGRVISLA
KPEAGNLVLATIALLFAATSSILIPKFGGKIIDIVSGDIQTPEQKSEALNAVKNTILEIF
LIVIVGSVCTALRAWLFSSASERVVARLRKNLLSHLVHQEIAFFDVTRTGELLSRLSEDT
QIIKNAATTNLSEALRNLATAFIGLGFMFQTSWKLTLLSLAVVPVISVAVRRFGRYMREL
SHKTQAAAAVASSIAEETFGAIRTVRSFAQEDYEISRYSEKVDETLNLGLGQAKVVGLFS
GSLNAASTLSVIVVVIYGATLTIQGAMTPGALTSFILYSLTVGSSVSGLSGLYTVAMKAA
GASRRVFQILDRTSSMPKSGDLCPLGDQAAEVELDDVWFAYPSRPSHMVLKGITMKLQSG
SKVALVGPSGGGKTTIANLIERFYDPVKGKILLNGVSLVEISHKHLHHKVSIVSQEPVLF
NCSIEENIAYGLGSKASSEDIEKAAKMANAHEFVSKFPEKYQTHVGERGLRLSGGQKQRI
AIARALLMNPTILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSANTVA
VVSDGQIVESGTHDDLLNKNGIYTALVRRQLQGYKSDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400063067
Transcript Infomation

pacid=37462484 locus=PGSC0003DMG400024532 ID=PGSC0003DMT400063067.v4.03 annot-version=v4.03
Sequence

ATGGACGGCCATTCAGGAATGCATGGCCATGGTTTCGGTAATGCCAGAACTCCTTTGTTA
GACAGACATGCCTTAGGGAGAAAGAGAAATGATGCTGGAGATGGTCAGCTGGGAGACCTT
GAGCATGGTGATTCTGTTCCGGCACCAAATGTTGGATTTGGCAGAGTTATTTCACTTGCA
AAGCCTGAAGCAGGAAATTTGGTATTAGCCACAATTGCTTTGCTGTTTGCAGCAACATCA
AGCATTTTGATTCCAAAATTTGGGGGAAAGATAATTGATATTGTTTCAGGTGATATCCAA
ACACCTGAACAGAAGTCAGAAGCTTTAAATGCAGTCAAGAACACAATACTTGAAATCTTT
CTGATTGTCATCGTCGGTTCTGTTTGCACAGCACTTCGAGCATGGTTATTTTCTTCTGCT
AGTGAAAGGGTTGTAGCCAGGTTGAGAAAGAACTTGCTAAGTCACCTTGTTCACCAGGAG
ATAGCTTTCTTTGATGTTACTCGAACTGGGGAGCTCCTCAGTAGGCTATCTGAAGATACC
CAGATCATAAAGAATGCTGCAACTACTAATCTTTCAGAGGCTTTGAGGAATCTTGCTACT
GCATTTATTGGTCTTGGGTTTATGTTTCAAACATCATGGAAATTAACATTGTTGTCGCTA
GCTGTTGTACCAGTCATATCAGTTGCAGTACGCAGATTTGGTCGCTACATGCGTGAGCTT
TCCCACAAAACTCAAGCTGCTGCAGCAGTAGCCTCGTCCATTGCTGAGGAAACTTTTGGC
GCCATACGCACAGTGAGATCATTTGCGCAGGAAGATTACGAGATTTCACGCTATTCGGAG
AAAGTTGATGAGACCTTAAATCTTGGGCTTGGACAAGCTAAAGTGGTTGGCCTTTTCTCT
GGAAGCTTAAATGCTGCATCTACTCTATCAGTTATTGTAGTAGTAATATATGGAGCCACT
CTGACTATCCAAGGCGCTATGACACCTGGAGCTCTTACATCCTTTATACTCTACAGCTTA
ACAGTTGGATCATCCGTATCTGGACTTTCTGGATTATATACTGTAGCAATGAAAGCTGCT
GGAGCCAGCAGACGGGTTTTTCAGATCTTGGATCGCACATCATCCATGCCAAAATCAGGA
GACCTATGTCCATTGGGTGATCAAGCTGCAGAGGTTGAACTGGATGATGTCTGGTTTGCC
TATCCATCACGTCCTAGCCACATGGTCCTCAAGGGTATAACAATGAAACTACAATCTGGT
TCAAAGGTTGCACTGGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAATTTGATA
GAGAGATTCTATGATCCTGTTAAAGGGAAGATCTTGCTCAATGGGGTTTCTCTGGTTGAA
ATATCTCATAAGCACCTACACCATAAGGTTAGTATAGTGAGCCAGGAACCTGTTCTTTTC
AACTGTTCCATCGAAGAAAATATTGCCTATGGATTGGGCAGCAAAGCAAGCAGTGAAGAT
ATAGAAAAAGCAGCTAAAATGGCTAATGCTCATGAATTTGTATCCAAATTTCCCGAAAAA
TATCAAACCCATGTCGGAGAACGAGGATTGAGACTTTCTGGTGGTCAGAAACAGAGAATT
GCCATAGCTAGAGCACTGCTGATGAACCCTACAATTTTATTGTTGGATGAGGCCACGAGT
GCTCTGGATGCTGAAAGTGAATATCTAGTTCAGGATGCCATGGATTCCCTGATGAAAGGT
AGAACCGTTCTTGTCATAGCTCACAGGCTTTCAACAGTCAAGAGCGCGAATACTGTAGCT
GTTGTTTCGGATGGTCAAATAGTGGAAAGTGGCACACATGATGACCTTCTGAACAAGAAC
GGGATCTACACAGCACTTGTGAGGAGGCAGTTGCAGGGATACAAATCTGATAGCTAG