Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063013
CDS Infomation

pacid=37462128 polypeptide=PGSC0003DMP400042414 locus=PGSC0003DMG400024519 ID=PGSC0003DMT400063013.v4.03 annot-version=v4.03
Sequence

ATGTTCACGCTGGCGAGCTTCCCCACGGCTGCTCCGGCGACGTTAACGCCGTCGCCGGCG
TCGAACTCATGCTGCCGCCACCAGCCCCAATTTCAAACCGTCAAAGTTAGTCCAAAACCC
AACAAATTACGGTCGTTTGCAACTACCTCCGTTCCAAAATCGGCAGGTTCAATTTGCACC
CCACCACCTGAGGAAGATTCTATAACTGCAAAATCAACTTTGAAGAATCAGCTCAAGAAC
CCATTAACGCTATCCGAAGAGATCACGCAACTGTGCGAATCCAAAAGCTCGTCGGAAGTT
TTCCGTACATTTCAAGAAAACCTCGAAAAGGCCTTCTACCACTCGTCGGAAAAATCCGAG
GCCTTAGGCGTACTCTTACAGGCCTGTGGTAAACAAAAGGACATTCAAACGGGTCGTAAA
GTCCATGAAATGGTTACTTCTTTGACCCAATTAAAAGATGACGTTATACTCTGTACGCGG
CTCATCTCAATGTACTCCATGTGTGGGTATCCTTCCGATTCTCTCTCTGTTTTCCATCAA
TTACGAAGCAAAAAACTGTATCAATGGAATGTTCTTATGAGTGGGTACACAAAGAATGAA
CTTTGGGTTGATGCTATTTGTTTGTTTATTGAGCTGATGACTTCAACCGAGGAAAGGCCA
GACAATTTTACTTTTCCTTTGGTTATTAAGGCTTGTGGAGGGGTTCTTGATGTGGGTTTA
GGGGAAGCTATTCATGGGATGGCATCAAAGATGGGTTTGGTTAGCGATGTCTTTGTAAGC
AATGCGTTAATTTCCATGTATGGGAAGTTAAGTCTTGTTGAGGAAGCTATGAAAGTGTTT
GAGCATATGCCTGAGAGGAATTTGGTTTCAAGCAACTCAATGATTTCTGGGTTCTCAGCG
AATGGGTATATTGAACAAAGTTTTGATCTTTTCAGAAATATATTTACAGGGGATGAAGTT
CTTGTTCCAGACACGACTACCGTGGTTATTATGCTGCCAATTTGTGCAGCAGCAGAAGAA
GTGGAATTCGGGAAGATTATTCATGGTTTAGCTGTAAAGCTAGGATTAGCTGACGAGTTA
ACAGTGAATAACTCTTTAGTGGATATGTATTGCAAAGTTGGATACTTTTCTGATGCACAA
ATTCTGTTTGAAGAAAATGAGAGCAAAAATGTGGTCTCTTGGAACTCCATTATCGGGGGT
TATTCAGGAGAAGGAGATGATAGAGGAACATTTCATCTTATGAGAAGGATGCAAAGTACC
GATGAGTATGTGAAGGCGAATGAGGTTACTCTATTGAATGTTTTGCCCGTGTGCCTAGAG
GAGTCAGAGCAGTTGATACTGAAAGAACTGCATGGCTACTCGCTTAGAAATGGTCTTGAA
TACCATGAGTTGTTAACAAATGCTTTTATAGCTGCCTATGCAAAGTGTGGATTGCTCAGA
TACGCTGAGCTTGTATTCTATGGAGTGACGAATAAGACAGTAAGCTCTTGGAATGCACTG
ATAAGTGGCTATGCTCGGAATGAAGATCCATCCAAGGCTTTGACTCTGTCCTCTGAAATG
ATGGATTCTGGCTTGCTTCCTGACTGGTTCACTATCGGTAGCCTTCTGTTTGCTTGTTCC
CACTTAAAACTGCTACATTGTGGTACAATAATTCACGGTTTTGTGCTTAGAAATGGTCTA
GAAGCAGATATGTCTACACTAGTTTCCCTAGTTTCATTCTACATGACTTGTGGAAAACCA
GAGCTAGCACAACATCTGTTTGACAGGATAGAAAATAAAAATGTGGTATCCTGGAACGTG
ATGATAGCTGGTTATTTGCAGAATGCACTACCAGATAAAGCATTTTGTCTGCTTCGTGAT
ATGGTAGCTCATAGATTTCAACCTGATGAAATTTCGGTGACAAGTGTTTTAGGGGCTTGT
TCAACATTGTCTGCTGCCAGGCTGGGGAAAGAAGTTCATTGCTTTGCACTGAAATCCAAC
CTTATAGAGGATAGTTTTGTCCATTGCTCAATCATAGACATGTATGCAAAATCTGGATTT
ATAGAAATGTCCAAGTATGTTTTTGACCATATTCCACTCAAAGATATAACATCATGGACA
GCTATGATTACAGGATATGCAGTTCATGGACTTGGAATGGAGGCCATCAAGCTATTTCAG
GAAATGCAAAAATCGGGCTTCAACCCTGCCAGCTTGACATATATCTCTATTTTAATGGCA
TGTAACCACGCCGGGCTCATTGAAGAAGGTCGACAATATGTAAAAGAGATGCAGACATTG
CATGGTCTAAAACCTGAATTGGAGCATTATGCATGCGTGATTGACATGCTGGCTCGTGCT
GGACAGTTTGATGATGCCCTAAATCTCATGGCTGAGATGCCTATGCAGCCAGATACTCAA
ATTTGGTGTTCGTTGCTCAATTCATGTATAGTTCACGCCCAGTCAAATCTTGGGAAGAAA
TGTGCCAACAAGTTACTGGAATTAAAACCAAAAAGAGCAGAAATTTATGTTTTAGTATCC
AATTTTTTTGCTAGATATGGGGACTGGGACTCTGTTAGACAAGTGAGGGACAAGATGAAG
GAATTAGGCTTGCAAAAAGAAATTGGTTGCAGTCATATTGAAATAGGAGGAAAAAGCTAT
AACTTTGCTGTTGGCAATATGTTTTCCAAGCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400042414
PEP Infomation

pacid=37462128 transcript=PGSC0003DMT400063013 locus=PGSC0003DMG400024519 ID=PGSC0003DMT400063013.v4.03 annot-version=v4.03
Sequence

MFTLASFPTAAPATLTPSPASNSCCRHQPQFQTVKVSPKPNKLRSFATTSVPKSAGSICT
PPPEEDSITAKSTLKNQLKNPLTLSEEITQLCESKSSSEVFRTFQENLEKAFYHSSEKSE
ALGVLLQACGKQKDIQTGRKVHEMVTSLTQLKDDVILCTRLISMYSMCGYPSDSLSVFHQ
LRSKKLYQWNVLMSGYTKNELWVDAICLFIELMTSTEERPDNFTFPLVIKACGGVLDVGL
GEAIHGMASKMGLVSDVFVSNALISMYGKLSLVEEAMKVFEHMPERNLVSSNSMISGFSA
NGYIEQSFDLFRNIFTGDEVLVPDTTTVVIMLPICAAAEEVEFGKIIHGLAVKLGLADEL
TVNNSLVDMYCKVGYFSDAQILFEENESKNVVSWNSIIGGYSGEGDDRGTFHLMRRMQST
DEYVKANEVTLLNVLPVCLEESEQLILKELHGYSLRNGLEYHELLTNAFIAAYAKCGLLR
YAELVFYGVTNKTVSSWNALISGYARNEDPSKALTLSSEMMDSGLLPDWFTIGSLLFACS
HLKLLHCGTIIHGFVLRNGLEADMSTLVSLVSFYMTCGKPELAQHLFDRIENKNVVSWNV
MIAGYLQNALPDKAFCLLRDMVAHRFQPDEISVTSVLGACSTLSAARLGKEVHCFALKSN
LIEDSFVHCSIIDMYAKSGFIEMSKYVFDHIPLKDITSWTAMITGYAVHGLGMEAIKLFQ
EMQKSGFNPASLTYISILMACNHAGLIEEGRQYVKEMQTLHGLKPELEHYACVIDMLARA
GQFDDALNLMAEMPMQPDTQIWCSLLNSCIVHAQSNLGKKCANKLLELKPKRAEIYVLVS
NFFARYGDWDSVRQVRDKMKELGLQKEIGCSHIEIGGKSYNFAVGNMFSKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400063013
Transcript Infomation

pacid=37462128 locus=PGSC0003DMG400024519 ID=PGSC0003DMT400063013.v4.03 annot-version=v4.03
Sequence

ATGTTCACGCTGGCGAGCTTCCCCACGGCTGCTCCGGCGACGTTAACGCCGTCGCCGGCG
TCGAACTCATGCTGCCGCCACCAGCCCCAATTTCAAACCGTCAAAGTTAGTCCAAAACCC
AACAAATTACGGTCGTTTGCAACTACCTCCGTTCCAAAATCGGCAGGTTCAATTTGCACC
CCACCACCTGAGGAAGATTCTATAACTGCAAAATCAACTTTGAAGAATCAGCTCAAGAAC
CCATTAACGCTATCCGAAGAGATCACGCAACTGTGCGAATCCAAAAGCTCGTCGGAAGTT
TTCCGTACATTTCAAGAAAACCTCGAAAAGGCCTTCTACCACTCGTCGGAAAAATCCGAG
GCCTTAGGCGTACTCTTACAGGCCTGTGGTAAACAAAAGGACATTCAAACGGGTCGTAAA
GTCCATGAAATGGTTACTTCTTTGACCCAATTAAAAGATGACGTTATACTCTGTACGCGG
CTCATCTCAATGTACTCCATGTGTGGGTATCCTTCCGATTCTCTCTCTGTTTTCCATCAA
TTACGAAGCAAAAAACTGTATCAATGGAATGTTCTTATGAGTGGGTACACAAAGAATGAA
CTTTGGGTTGATGCTATTTGTTTGTTTATTGAGCTGATGACTTCAACCGAGGAAAGGCCA
GACAATTTTACTTTTCCTTTGGTTATTAAGGCTTGTGGAGGGGTTCTTGATGTGGGTTTA
GGGGAAGCTATTCATGGGATGGCATCAAAGATGGGTTTGGTTAGCGATGTCTTTGTAAGC
AATGCGTTAATTTCCATGTATGGGAAGTTAAGTCTTGTTGAGGAAGCTATGAAAGTGTTT
GAGCATATGCCTGAGAGGAATTTGGTTTCAAGCAACTCAATGATTTCTGGGTTCTCAGCG
AATGGGTATATTGAACAAAGTTTTGATCTTTTCAGAAATATATTTACAGGGGATGAAGTT
CTTGTTCCAGACACGACTACCGTGGTTATTATGCTGCCAATTTGTGCAGCAGCAGAAGAA
GTGGAATTCGGGAAGATTATTCATGGTTTAGCTGTAAAGCTAGGATTAGCTGACGAGTTA
ACAGTGAATAACTCTTTAGTGGATATGTATTGCAAAGTTGGATACTTTTCTGATGCACAA
ATTCTGTTTGAAGAAAATGAGAGCAAAAATGTGGTCTCTTGGAACTCCATTATCGGGGGT
TATTCAGGAGAAGGAGATGATAGAGGAACATTTCATCTTATGAGAAGGATGCAAAGTACC
GATGAGTATGTGAAGGCGAATGAGGTTACTCTATTGAATGTTTTGCCCGTGTGCCTAGAG
GAGTCAGAGCAGTTGATACTGAAAGAACTGCATGGCTACTCGCTTAGAAATGGTCTTGAA
TACCATGAGTTGTTAACAAATGCTTTTATAGCTGCCTATGCAAAGTGTGGATTGCTCAGA
TACGCTGAGCTTGTATTCTATGGAGTGACGAATAAGACAGTAAGCTCTTGGAATGCACTG
ATAAGTGGCTATGCTCGGAATGAAGATCCATCCAAGGCTTTGACTCTGTCCTCTGAAATG
ATGGATTCTGGCTTGCTTCCTGACTGGTTCACTATCGGTAGCCTTCTGTTTGCTTGTTCC
CACTTAAAACTGCTACATTGTGGTACAATAATTCACGGTTTTGTGCTTAGAAATGGTCTA
GAAGCAGATATGTCTACACTAGTTTCCCTAGTTTCATTCTACATGACTTGTGGAAAACCA
GAGCTAGCACAACATCTGTTTGACAGGATAGAAAATAAAAATGTGGTATCCTGGAACGTG
ATGATAGCTGGTTATTTGCAGAATGCACTACCAGATAAAGCATTTTGTCTGCTTCGTGAT
ATGGTAGCTCATAGATTTCAACCTGATGAAATTTCGGTGACAAGTGTTTTAGGGGCTTGT
TCAACATTGTCTGCTGCCAGGCTGGGGAAAGAAGTTCATTGCTTTGCACTGAAATCCAAC
CTTATAGAGGATAGTTTTGTCCATTGCTCAATCATAGACATGTATGCAAAATCTGGATTT
ATAGAAATGTCCAAGTATGTTTTTGACCATATTCCACTCAAAGATATAACATCATGGACA
GCTATGATTACAGGATATGCAGTTCATGGACTTGGAATGGAGGCCATCAAGCTATTTCAG
GAAATGCAAAAATCGGGCTTCAACCCTGCCAGCTTGACATATATCTCTATTTTAATGGCA
TGTAACCACGCCGGGCTCATTGAAGAAGGTCGACAATATGTAAAAGAGATGCAGACATTG
CATGGTCTAAAACCTGAATTGGAGCATTATGCATGCGTGATTGACATGCTGGCTCGTGCT
GGACAGTTTGATGATGCCCTAAATCTCATGGCTGAGATGCCTATGCAGCCAGATACTCAA
ATTTGGTGTTCGTTGCTCAATTCATGTATAGTTCACGCCCAGTCAAATCTTGGGAAGAAA
TGTGCCAACAAGTTACTGGAATTAAAACCAAAAAGAGCAGAAATTTATGTTTTAGTATCC
AATTTTTTTGCTAGATATGGGGACTGGGACTCTGTTAGACAAGTGAGGGACAAGATGAAG
GAATTAGGCTTGCAAAAAGAAATTGGTTGCAGTCATATTGAAATAGGAGGAAAAAGCTAT
AACTTTGCTGTTGGCAATATGTTTTCCAAGCCATAA