Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062986
CDS Infomation

pacid=37460762 polypeptide=PGSC0003DMP400042396 locus=PGSC0003DMG401024510 ID=PGSC0003DMT400062986.v4.03 annot-version=v4.03
Sequence

ATGGCCTTAGCTCCAGCGCAGCTCTCTAAGCCCTTTTTTTCCACCAAACCCACATCACAA
ACGCCACTTTTCTCATTACCTGCTACCCAGAAGATTCAATCTCGGCGGTCGTCGTCCACC
GTCCGATGCTCCGTCATCGTTGCACCATCGGCAACTGCATCCAAGGCATCAGCCAAGGTG
AAGTCTGTTAAGGCAAGGCAGATCATAGATAGCAGGGGAAATCCTACCGTCGAGGTTGAT
CTGGTCACCGGCGATGATCTACTTTATCGATCGGCGGTTCCAAGTGGAGCTTCCACCGGG
ATCTATGAGGCATTGGAGCTCAGAGATGGTGACAAGAGCCTTTATGGTGGTAAAGGGGTC
CTCAATGCTGTAAAGAATATTAACGAATATTTGGGCCCCAAACTTGTTGGTGTTGATGTG
AGGAACCAGACTGATGTCGATGCTGTTATGCTGGAGATTGATGGAACTCCTAATAAATCA
AAACTTGGAGCTAATGCCATTCTTGGAGTTTCTCTCAGTGTGTGTAGAGCTGGCGCTGGA
GCAAAAGCAGTACCTTTGTATAAACACATTCAAGAAATATCTGGAACCAAAGAACTTGTA
ATGCCAGTTCCAGCATTCAATGTGATAAATGGAGGGAGCCATGCTGGCAACAATTTGGCT
ATGCAAGAGTTCATGATTCTACCTGTTGGAGCACCAACATTTGCTGAGGCACTTCGTATG
GGTAGCGAAGTCTATCACACTCTAAAGGGAATTATCAAAGCTAAGTACGGTCAAGATGCA
TGCAATGTTGGTGATGAAGGTGGATTCGCTCCAAATGTCCAGGATAACAGGGAAGGGCTA
GTATTGCTTATGGATGCAATTGAGAAGGCTGGTTACACTGGCAAGATTAAAATTGGCATG
GATGTAGCAGCATCTGAGTTCTTGACAAAAGATGCAAAATATGATCTCAATTTCAAGAAA
CAACCAAATGATGGAGCTCATGTACTTAGTGCTCAGAGCCTCTGTGAACTCTACAAGGAG
TTTGTCAGAGATTTTCCTATTGTATCTATTGAAGATCCCTTTGACCAAGATGATTGGAGC
TCTTGGGCATCTCTACAATCTTCAGTTGACATTCAACTTGTTGGTGATGATTTGTTGGTG
ACTAATCCAAAGAGAATTGCTGAAGCAATTCAGAAAAAGGCATGCAATGCATTACTGTTG
AAGGTTAACCAGATTGGTACTGTGACAGAATCCATTCAAGCAGCACTAGACTCCAAAGCT
GCAGGCTGGGGTGTTATGGTCAGTCACCGAAGTGGTGAAACAGAGGATAATTTTATCGCA
GATCTGTCTGTTGGTTTGGCCAGTGGACAGATCAAGACTGGAGCACCCTGCCGGAGTGAG
CGGCTGGCAAAATACAACCAGCTTCTACGTATCGAAGAGGAACTTGGGGATGTTCGTTAT
GCTGGTGAATCTTTCAGATCTCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042396
PEP Infomation

pacid=37460762 transcript=PGSC0003DMT400062986 locus=PGSC0003DMG401024510 ID=PGSC0003DMT400062986.v4.03 annot-version=v4.03
Sequence

MALAPAQLSKPFFSTKPTSQTPLFSLPATQKIQSRRSSSTVRCSVIVAPSATASKASAKV
KSVKARQIIDSRGNPTVEVDLVTGDDLLYRSAVPSGASTGIYEALELRDGDKSLYGGKGV
LNAVKNINEYLGPKLVGVDVRNQTDVDAVMLEIDGTPNKSKLGANAILGVSLSVCRAGAG
AKAVPLYKHIQEISGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGAPTFAEALRM
GSEVYHTLKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIEKAGYTGKIKIGM
DVAASEFLTKDAKYDLNFKKQPNDGAHVLSAQSLCELYKEFVRDFPIVSIEDPFDQDDWS
SWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKACNALLLKVNQIGTVTESIQAALDSKA
AGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGDVRY
AGESFRSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400062986
Transcript Infomation

pacid=37460762 locus=PGSC0003DMG401024510 ID=PGSC0003DMT400062986.v4.03 annot-version=v4.03
Sequence

ATGGCCTTAGCTCCAGCGCAGCTCTCTAAGCCCTTTTTTTCCACCAAACCCACATCACAA
ACGCCACTTTTCTCATTACCTGCTACCCAGAAGATTCAATCTCGGCGGTCGTCGTCCACC
GTCCGATGCTCCGTCATCGTTGCACCATCGGCAACTGCATCCAAGGCATCAGCCAAGGTG
AAGTCTGTTAAGGCAAGGCAGATCATAGATAGCAGGGGAAATCCTACCGTCGAGGTTGAT
CTGGTCACCGGCGATGATCTACTTTATCGATCGGCGGTTCCAAGTGGAGCTTCCACCGGG
ATCTATGAGGCATTGGAGCTCAGAGATGGTGACAAGAGCCTTTATGGTGGTAAAGGGGTC
CTCAATGCTGTAAAGAATATTAACGAATATTTGGGCCCCAAACTTGTTGGTGTTGATGTG
AGGAACCAGACTGATGTCGATGCTGTTATGCTGGAGATTGATGGAACTCCTAATAAATCA
AAACTTGGAGCTAATGCCATTCTTGGAGTTTCTCTCAGTGTGTGTAGAGCTGGCGCTGGA
GCAAAAGCAGTACCTTTGTATAAACACATTCAAGAAATATCTGGAACCAAAGAACTTGTA
ATGCCAGTTCCAGCATTCAATGTGATAAATGGAGGGAGCCATGCTGGCAACAATTTGGCT
ATGCAAGAGTTCATGATTCTACCTGTTGGAGCACCAACATTTGCTGAGGCACTTCGTATG
GGTAGCGAAGTCTATCACACTCTAAAGGGAATTATCAAAGCTAAGTACGGTCAAGATGCA
TGCAATGTTGGTGATGAAGGTGGATTCGCTCCAAATGTCCAGGATAACAGGGAAGGGCTA
GTATTGCTTATGGATGCAATTGAGAAGGCTGGTTACACTGGCAAGATTAAAATTGGCATG
GATGTAGCAGCATCTGAGTTCTTGACAAAAGATGCAAAATATGATCTCAATTTCAAGAAA
CAACCAAATGATGGAGCTCATGTACTTAGTGCTCAGAGCCTCTGTGAACTCTACAAGGAG
TTTGTCAGAGATTTTCCTATTGTATCTATTGAAGATCCCTTTGACCAAGATGATTGGAGC
TCTTGGGCATCTCTACAATCTTCAGTTGACATTCAACTTGTTGGTGATGATTTGTTGGTG
ACTAATCCAAAGAGAATTGCTGAAGCAATTCAGAAAAAGGCATGCAATGCATTACTGTTG
AAGGTTAACCAGATTGGTACTGTGACAGAATCCATTCAAGCAGCACTAGACTCCAAAGCT
GCAGGCTGGGGTGTTATGGTCAGTCACCGAAGTGGTGAAACAGAGGATAATTTTATCGCA
GATCTGTCTGTTGGTTTGGCCAGTGGACAGATCAAGACTGGAGCACCCTGCCGGAGTGAG
CGGCTGGCAAAATACAACCAGCTTCTACGTATCGAAGAGGAACTTGGGGATGTTCGTTAT
GCTGGTGAATCTTTCAGATCTCCTTGA