Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062969
CDS Infomation

pacid=37462773 polypeptide=PGSC0003DMP400042385 locus=PGSC0003DMG400024505 ID=PGSC0003DMT400062969.v4.03 annot-version=v4.03
Sequence

ATGCCAGTTTTCACAAGATCTCAGATAACTGACTCGCAGCCGCAGAATGATCAAAGAATT
AGACCAAGAACAGATCAAGAAGATACCCAAATGGCTCGAAATTTGAGGAATCCACACCAT
GGTTTGAAAGAGAAGATGAAAGCACTTACCCTTTTGTATGAACAGCAAAAGCAAGGCTCT
GCGGCTATCAAGAATCAATCTGTCAAGCCTGAAGATTCAAGATTATCGAGTCACCCTAGT
GTAGACCTTGTCAGTTCAGGTAGAAGAGCTGAGAAAGAGCAAAAACAATCAAAGCCAATT
AGTCATGTGATGAGGGAGAACACTATGCATAGTTCAACTGTAACAAGAACTTATGTGGCT
CCGCCGCCACCTTCAGGGTTGGATGATGGGAAGGAAAATGTCGCGGTGGTGGCAGGTGGT
GACAGAATAGTAGGATTTTCATACCCAAAAAGGGTGAATGCGTCGAGTACTGTGGCAAGA
AAGCTCTCATTGGGAAGCTCAACAATGCCACATACAGAACCTAGGGCAACTAGAAGGATA
GTGAAAGAAAATGTACAAGAGTTAGATACCATTTCGGAGAAAGCAGCTAGCAAGGGTGGG
GGCAGTGATGATGGTGGTAGTAGAATTCTTGTTTTTGTAAGGCTAAGGCCAATTTCAAGA
AAGGAGAGAGAAGCTGGAGCCAGGTGTTGTGTGAAAATAGTGGATGGAAGAGATGTTTAT
CTGACTGAATTCGCCACTGAGAATGATTACCTTAGGCTGAAGAGGCTCAGGGGGCGCCAT
TTTACTTTTGATGCTTCCTTTCCTGATACTGCTACTCAGCATGATGTTTATTCCACAACA
ACAGCAGAGCTTGTGGAAGCAGTTCTGCAGGGAAGAAATGGTTCTGTGTTTTGCTATGGT
GCCACAGGTGCTGGAAAGACATACACAATGCTCGGTACAATTGAGAATCCTGGGGTAATG
GTTTTAGCAATCAAGGATCTCTTTAGCAAAATACGGCAAAGGAGCTATGATGGGAATCAT
GTTGTTCATCTTTCATATCTAGAGGTCTACAATGAAACTGTTAGAGATTTACTGTCCCCT
GGGAGGCCTTTAGTCCTAAGAGAAGATAAACAGGGTATAGTGGCAGCAGGGCTTACACAG
TATAGAGCATACTCCACAGATGAAGTAATGGCATTGCTCCAACAAGGAAACCTAAACCGA
ACCACAGAGCCCACCCGCTGCAATGAAACGTCCTCACGCTCTCATGCTATTCTTCAGGTT
GTGATTGAATACCATGTCAAAGATAGTTCAAATAACATTGTAAACCGAGTCGGAAAGCTT
TCACTCATTGACCTTGCGGGTTCAGAAAGAGCTCTAGCTACTGATCAGAGAACCCTGAGA
TCACTTGAAGGTGCTAACATAAACAAGTCACTTCTCGCGCTGAGCAGCTGCATCAATGCT
CTCGTTGAGGGAAAAAAGCACATTCCTTATCGGAATTCTAAGCTCACTCAACTACTCAAG
GATTCACTGGGTGGTGCTTGTAACACCGTTATGATTGCCAATATTAGCCCAAGTAATCTT
TCATTTGGTGAAACCCAAAACACACTACACTGGGCTGACCGAGCAAAAGAGATCCGAACA
AAGGCTTATGATGCACATGAGGAAATGCAAATGCCTGATTCTGAAACAGATCAGGCCAAG
TTATTGCTTGAGCTGCAAAAAGAGAACCGCGAATTGAGAATGCGTTTGGCTCATCAGCAG
CAAAAGCTGATTACTATCCAGAAGGAAAATTTGGCTGCAAACTCTTCTCCTGCCCCATCA
ATAGTTTCCTCTATCTTATCACCAGCACCTTCTTCTGCTCAGCCAAATGAAAAACGGAAA
GCAAGACCCTCTTTCTTGGCTGGAAATTGTTTTACCCCCGAATCAAAGAGAAAAGGTGCA
GATGACCCAGTTAGAGATCTAAAAAAGGTGGTTAAGGGATTGGAGGCAGAAATTGAGAGA
CTGAAAAAGGATCATGTATTGCAGATAAAGCAGAAAGATGATACGATCCGTGAGTTGTCA
CGAAAGAGTGCAAAACCAGCAGGAGGGACACAAGTGGGTGGTGTAAAAAGGATTGTTACA
AGGGCAAGCTTGCGGCCAAGGGAACCACATGATGTTCATTTGAAGAGTCCAAGTCATCGG
TTTCATTCTCCAGCTCCCACGGCAAAAAAACGCAGCTTCTGGGATATAACAACAGCTAAC
AGTCCATCAGTTGTCACTTTAAATGGTAGAAAGACCAGAAGCCATGTTAATACTGAAACA
GTAGCAGCTCCATCCATGCTTCTCCAGCTTGCATATCCATGTTTCTGGTTTGTGTTCATG
TTTGGGCCGCATGTATTCAATTGCACCACTCAGCCAGGATTTGCTCGCCAGAATGTAAAG
CACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042385
PEP Infomation

pacid=37462773 transcript=PGSC0003DMT400062969 locus=PGSC0003DMG400024505 ID=PGSC0003DMT400062969.v4.03 annot-version=v4.03
Sequence

MPVFTRSQITDSQPQNDQRIRPRTDQEDTQMARNLRNPHHGLKEKMKALTLLYEQQKQGS
AAIKNQSVKPEDSRLSSHPSVDLVSSGRRAEKEQKQSKPISHVMRENTMHSSTVTRTYVA
PPPPSGLDDGKENVAVVAGGDRIVGFSYPKRVNASSTVARKLSLGSSTMPHTEPRATRRI
VKENVQELDTISEKAASKGGGSDDGGSRILVFVRLRPISRKEREAGARCCVKIVDGRDVY
LTEFATENDYLRLKRLRGRHFTFDASFPDTATQHDVYSTTTAELVEAVLQGRNGSVFCYG
ATGAGKTYTMLGTIENPGVMVLAIKDLFSKIRQRSYDGNHVVHLSYLEVYNETVRDLLSP
GRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNLNRTTEPTRCNETSSRSHAILQV
VIEYHVKDSSNNIVNRVGKLSLIDLAGSERALATDQRTLRSLEGANINKSLLALSSCINA
LVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPSNLSFGETQNTLHWADRAKEIRT
KAYDAHEEMQMPDSETDQAKLLLELQKENRELRMRLAHQQQKLITIQKENLAANSSPAPS
IVSSILSPAPSSAQPNEKRKARPSFLAGNCFTPESKRKGADDPVRDLKKVVKGLEAEIER
LKKDHVLQIKQKDDTIRELSRKSAKPAGGTQVGGVKRIVTRASLRPREPHDVHLKSPSHR
FHSPAPTAKKRSFWDITTANSPSVVTLNGRKTRSHVNTETVAAPSMLLQLAYPCFWFVFM
FGPHVFNCTTQPGFARQNVKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400062969
Transcript Infomation

pacid=37462773 locus=PGSC0003DMG400024505 ID=PGSC0003DMT400062969.v4.03 annot-version=v4.03
Sequence

ATGCCAGTTTTCACAAGATCTCAGATAACTGACTCGCAGCCGCAGAATGATCAAAGAATT
AGACCAAGAACAGATCAAGAAGATACCCAAATGGCTCGAAATTTGAGGAATCCACACCAT
GGTTTGAAAGAGAAGATGAAAGCACTTACCCTTTTGTATGAACAGCAAAAGCAAGGCTCT
GCGGCTATCAAGAATCAATCTGTCAAGCCTGAAGATTCAAGATTATCGAGTCACCCTAGT
GTAGACCTTGTCAGTTCAGGTAGAAGAGCTGAGAAAGAGCAAAAACAATCAAAGCCAATT
AGTCATGTGATGAGGGAGAACACTATGCATAGTTCAACTGTAACAAGAACTTATGTGGCT
CCGCCGCCACCTTCAGGGTTGGATGATGGGAAGGAAAATGTCGCGGTGGTGGCAGGTGGT
GACAGAATAGTAGGATTTTCATACCCAAAAAGGGTGAATGCGTCGAGTACTGTGGCAAGA
AAGCTCTCATTGGGAAGCTCAACAATGCCACATACAGAACCTAGGGCAACTAGAAGGATA
GTGAAAGAAAATGTACAAGAGTTAGATACCATTTCGGAGAAAGCAGCTAGCAAGGGTGGG
GGCAGTGATGATGGTGGTAGTAGAATTCTTGTTTTTGTAAGGCTAAGGCCAATTTCAAGA
AAGGAGAGAGAAGCTGGAGCCAGGTGTTGTGTGAAAATAGTGGATGGAAGAGATGTTTAT
CTGACTGAATTCGCCACTGAGAATGATTACCTTAGGCTGAAGAGGCTCAGGGGGCGCCAT
TTTACTTTTGATGCTTCCTTTCCTGATACTGCTACTCAGCATGATGTTTATTCCACAACA
ACAGCAGAGCTTGTGGAAGCAGTTCTGCAGGGAAGAAATGGTTCTGTGTTTTGCTATGGT
GCCACAGGTGCTGGAAAGACATACACAATGCTCGGTACAATTGAGAATCCTGGGGTAATG
GTTTTAGCAATCAAGGATCTCTTTAGCAAAATACGGCAAAGGAGCTATGATGGGAATCAT
GTTGTTCATCTTTCATATCTAGAGGTCTACAATGAAACTGTTAGAGATTTACTGTCCCCT
GGGAGGCCTTTAGTCCTAAGAGAAGATAAACAGGGTATAGTGGCAGCAGGGCTTACACAG
TATAGAGCATACTCCACAGATGAAGTAATGGCATTGCTCCAACAAGGAAACCTAAACCGA
ACCACAGAGCCCACCCGCTGCAATGAAACGTCCTCACGCTCTCATGCTATTCTTCAGGTT
GTGATTGAATACCATGTCAAAGATAGTTCAAATAACATTGTAAACCGAGTCGGAAAGCTT
TCACTCATTGACCTTGCGGGTTCAGAAAGAGCTCTAGCTACTGATCAGAGAACCCTGAGA
TCACTTGAAGGTGCTAACATAAACAAGTCACTTCTCGCGCTGAGCAGCTGCATCAATGCT
CTCGTTGAGGGAAAAAAGCACATTCCTTATCGGAATTCTAAGCTCACTCAACTACTCAAG
GATTCACTGGGTGGTGCTTGTAACACCGTTATGATTGCCAATATTAGCCCAAGTAATCTT
TCATTTGGTGAAACCCAAAACACACTACACTGGGCTGACCGAGCAAAAGAGATCCGAACA
AAGGCTTATGATGCACATGAGGAAATGCAAATGCCTGATTCTGAAACAGATCAGGCCAAG
TTATTGCTTGAGCTGCAAAAAGAGAACCGCGAATTGAGAATGCGTTTGGCTCATCAGCAG
CAAAAGCTGATTACTATCCAGAAGGAAAATTTGGCTGCAAACTCTTCTCCTGCCCCATCA
ATAGTTTCCTCTATCTTATCACCAGCACCTTCTTCTGCTCAGCCAAATGAAAAACGGAAA
GCAAGACCCTCTTTCTTGGCTGGAAATTGTTTTACCCCCGAATCAAAGAGAAAAGGTGCA
GATGACCCAGTTAGAGATCTAAAAAAGGTGGTTAAGGGATTGGAGGCAGAAATTGAGAGA
CTGAAAAAGGATCATGTATTGCAGATAAAGCAGAAAGATGATACGATCCGTGAGTTGTCA
CGAAAGAGTGCAAAACCAGCAGGAGGGACACAAGTGGGTGGTGTAAAAAGGATTGTTACA
AGGGCAAGCTTGCGGCCAAGGGAACCACATGATGTTCATTTGAAGAGTCCAAGTCATCGG
TTTCATTCTCCAGCTCCCACGGCAAAAAAACGCAGCTTCTGGGATATAACAACAGCTAAC
AGTCCATCAGTTGTCACTTTAAATGGTAGAAAGACCAGAAGCCATGTTAATACTGAAACA
GTAGCAGCTCCATCCATGCTTCTCCAGCTTGCATATCCATGTTTCTGGTTTGTGTTCATG
TTTGGGCCGCATGTATTCAATTGCACCACTCAGCCAGGATTTGCTCGCCAGAATGTAAAG
CACTAA