Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062961
CDS Infomation

pacid=37461868 polypeptide=PGSC0003DMP400042377 locus=PGSC0003DMG400024501 ID=PGSC0003DMT400062961.v4.03 annot-version=v4.03
Sequence

ATGCCTGGAGTTGTTATGGATGAAATTCATGAAGTAGGCGAGATTAAAGAATTGAAGGAA
AATGGAAATTCTACATCATGTAAAGAGAATGAGGAAGGGGGTTTAGCTCCTCGAAATGGG
GGCGAGGAGCATGTAGGTGATGGGGTGGTTGAGCCTTCCATTGAGGAACTTTATGAGAAT
GTGTGTGAGATGCAGAGCTCTGATCAATCTCCATCTAGGCATAGTTTTGGATCAGATGGA
GATGAATCTAGGATTGACTCCGAGTTACGACATCTTGTGGGGGGAGAAATGAGGGAAGTG
GAGATAATTGAGGAGGATGAGGAGGTGCAGAAGCCAGAGACTGAAGACTCTCGTAGCGAT
TCTGGCTCTAAGAAGGAAACTTCTGATGATGTGAAGTTGGATAATTCACCATCGTCTAGT
ATGAAGGATCCTTCTTCAGGGCAACCCAAGACGCCCTCTCAATTGGTGTTGGAATCAGAA
ACTTCAGCAAAATCAAATACAAAGGGTAGGAGAGCTTCCCTTGATAAGAAAAATGGAAAT
AATACGAAGAAGGTAGTTGTGGGAGGTATCTCAAGGAGTAGGCAGAAGAGTTCGCCTGCT
TCAGGATCAAAATTGAAGAATGGAACTGAGGACTCATCTGATTCAGGTTTAGACAATCCT
GACCTTGGCCCTTTCCTGCTTAAGCAAGCAAGAGATTTGATAGCTTCGGGGGATAATTCC
CATAAAGCTCTTGAATTGGCTCATCGAGCAGCGAAGTCATTTGAGAAATGTGCCAATGGA
AAACCTAGTTTGGATGTGGTCATGTGTCTGCATGTAACTGCAGCAATATACTGTAATCTG
GGCCAGTATGATGATGCCATTCCACTGATAGAGCACTCGTTAGAAATTCCGGTGGTTGAA
GAAGGACAAGAACACGCCCTTGCCAAATTTGCTGGTTATATGCAATTGGGTGATACTTAT
GCAATGTTGGGCCAACTTGAGAACTCGATTGTTTCTTATACCACCGGTATGGAAATCCAA
AGACAAGTGTTGGGAGATAGTGATCCCAGAGTTGGTGAGACTTGTCGATATCTTGCTGAG
GCTCATGTTCAGGCTCTGCAGTTTGATGAAGCGGAGAAGCTTTGTCGGATGGCTCTTGAC
ATACATAAAGAGAATGGTTCACCACCTTCACTAGAGGAAGCGGCAGACAGGAGGCTGATG
GGACTAATTTGTGAGTCAAAGGGAGACCATGAGGCTGCTCTCGAGCATCTTGTTCTGGCC
AGTATGGCCATGGTAGCCAATGGGCAGGAATCTGAGGTGGCATCTGTTGATTGTAGCATT
GGAGACACATATTTGTCTCTGAATAGGTATGATGAAGCCATTTTCGCTTACCAAAAGGCA
CTCACAGCTCTCAAGTCTAGCAAAGGAGAAAACCATCCCGCCGTTGCTTCTGTTTTTGTC
CGTTTGGCTGACTTGTACAACAGGACGGGAAAGCTAAGGGACTCAAAGTCATACTGTGAG
AATGCCCTCAGAATATATGGGAAGCCCATACCTGGGATTGCTCCAGAGGAGATTGCTAAT
GGTCTTACTGATGTTTCTGCTATTTATGAGTCGATGAATGAGCTTGATCAGGCACTCAAG
CTGCTACAGAAAGCGCTGAAGATTTATAACAATGCTCCTGGGCAGCAGAGTACTATAGCG
GGTATCGAAGCCCAAATGGGGGTGATCTATTATATGTTAGGAAAATATTCTGAATCTTAT
AACTCCTTTAAAAGTGCCATTTCAAAGCTCAGAGCAAGTGGAGAGAAGAAATCAGCATTC
TTCGGGGTCGCCCTTAACCAAATGGGGCTTGCTTGTGTACAGCGGTATGCAATAAATGAG
GCAGTCGAGTTGTTTGAAGAATCAAAGGGCATCTTGGAGCAAGAATATGGACCTTATCAC
CCTGAGACGTTGGGAGTGTACAGCAACCTTGCTGGCACATATGATGCTGTTGGCAGGTAT
GTCAATCGCTACATCTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042377
PEP Infomation

pacid=37461868 transcript=PGSC0003DMT400062961 locus=PGSC0003DMG400024501 ID=PGSC0003DMT400062961.v4.03 annot-version=v4.03
Sequence

MPGVVMDEIHEVGEIKELKENGNSTSCKENEEGGLAPRNGGEEHVGDGVVEPSIEELYEN
VCEMQSSDQSPSRHSFGSDGDESRIDSELRHLVGGEMREVEIIEEDEEVQKPETEDSRSD
SGSKKETSDDVKLDNSPSSSMKDPSSGQPKTPSQLVLESETSAKSNTKGRRASLDKKNGN
NTKKVVVGGISRSRQKSSPASGSKLKNGTEDSSDSGLDNPDLGPFLLKQARDLIASGDNS
HKALELAHRAAKSFEKCANGKPSLDVVMCLHVTAAIYCNLGQYDDAIPLIEHSLEIPVVE
EGQEHALAKFAGYMQLGDTYAMLGQLENSIVSYTTGMEIQRQVLGDSDPRVGETCRYLAE
AHVQALQFDEAEKLCRMALDIHKENGSPPSLEEAADRRLMGLICESKGDHEAALEHLVLA
SMAMVANGQESEVASVDCSIGDTYLSLNRYDEAIFAYQKALTALKSSKGENHPAVASVFV
RLADLYNRTGKLRDSKSYCENALRIYGKPIPGIAPEEIANGLTDVSAIYESMNELDQALK
LLQKALKIYNNAPGQQSTIAGIEAQMGVIYYMLGKYSESYNSFKSAISKLRASGEKKSAF
FGVALNQMGLACVQRYAINEAVELFEESKGILEQEYGPYHPETLGVYSNLAGTYDAVGRY
VNRYIY*

Transcript Sequence

Transcript ID

PGSC0003DMT400062961
Transcript Infomation

pacid=37461868 locus=PGSC0003DMG400024501 ID=PGSC0003DMT400062961.v4.03 annot-version=v4.03
Sequence

ATGCCTGGAGTTGTTATGGATGAAATTCATGAAGTAGGCGAGATTAAAGAATTGAAGGAA
AATGGAAATTCTACATCATGTAAAGAGAATGAGGAAGGGGGTTTAGCTCCTCGAAATGGG
GGCGAGGAGCATGTAGGTGATGGGGTGGTTGAGCCTTCCATTGAGGAACTTTATGAGAAT
GTGTGTGAGATGCAGAGCTCTGATCAATCTCCATCTAGGCATAGTTTTGGATCAGATGGA
GATGAATCTAGGATTGACTCCGAGTTACGACATCTTGTGGGGGGAGAAATGAGGGAAGTG
GAGATAATTGAGGAGGATGAGGAGGTGCAGAAGCCAGAGACTGAAGACTCTCGTAGCGAT
TCTGGCTCTAAGAAGGAAACTTCTGATGATGTGAAGTTGGATAATTCACCATCGTCTAGT
ATGAAGGATCCTTCTTCAGGGCAACCCAAGACGCCCTCTCAATTGGTGTTGGAATCAGAA
ACTTCAGCAAAATCAAATACAAAGGGTAGGAGAGCTTCCCTTGATAAGAAAAATGGAAAT
AATACGAAGAAGGTAGTTGTGGGAGGTATCTCAAGGAGTAGGCAGAAGAGTTCGCCTGCT
TCAGGATCAAAATTGAAGAATGGAACTGAGGACTCATCTGATTCAGGTTTAGACAATCCT
GACCTTGGCCCTTTCCTGCTTAAGCAAGCAAGAGATTTGATAGCTTCGGGGGATAATTCC
CATAAAGCTCTTGAATTGGCTCATCGAGCAGCGAAGTCATTTGAGAAATGTGCCAATGGA
AAACCTAGTTTGGATGTGGTCATGTGTCTGCATGTAACTGCAGCAATATACTGTAATCTG
GGCCAGTATGATGATGCCATTCCACTGATAGAGCACTCGTTAGAAATTCCGGTGGTTGAA
GAAGGACAAGAACACGCCCTTGCCAAATTTGCTGGTTATATGCAATTGGGTGATACTTAT
GCAATGTTGGGCCAACTTGAGAACTCGATTGTTTCTTATACCACCGGTATGGAAATCCAA
AGACAAGTGTTGGGAGATAGTGATCCCAGAGTTGGTGAGACTTGTCGATATCTTGCTGAG
GCTCATGTTCAGGCTCTGCAGTTTGATGAAGCGGAGAAGCTTTGTCGGATGGCTCTTGAC
ATACATAAAGAGAATGGTTCACCACCTTCACTAGAGGAAGCGGCAGACAGGAGGCTGATG
GGACTAATTTGTGAGTCAAAGGGAGACCATGAGGCTGCTCTCGAGCATCTTGTTCTGGCC
AGTATGGCCATGGTAGCCAATGGGCAGGAATCTGAGGTGGCATCTGTTGATTGTAGCATT
GGAGACACATATTTGTCTCTGAATAGGTATGATGAAGCCATTTTCGCTTACCAAAAGGCA
CTCACAGCTCTCAAGTCTAGCAAAGGAGAAAACCATCCCGCCGTTGCTTCTGTTTTTGTC
CGTTTGGCTGACTTGTACAACAGGACGGGAAAGCTAAGGGACTCAAAGTCATACTGTGAG
AATGCCCTCAGAATATATGGGAAGCCCATACCTGGGATTGCTCCAGAGGAGATTGCTAAT
GGTCTTACTGATGTTTCTGCTATTTATGAGTCGATGAATGAGCTTGATCAGGCACTCAAG
CTGCTACAGAAAGCGCTGAAGATTTATAACAATGCTCCTGGGCAGCAGAGTACTATAGCG
GGTATCGAAGCCCAAATGGGGGTGATCTATTATATGTTAGGAAAATATTCTGAATCTTAT
AACTCCTTTAAAAGTGCCATTTCAAAGCTCAGAGCAAGTGGAGAGAAGAAATCAGCATTC
TTCGGGGTCGCCCTTAACCAAATGGGGCTTGCTTGTGTACAGCGGTATGCAATAAATGAG
GCAGTCGAGTTGTTTGAAGAATCAAAGGGCATCTTGGAGCAAGAATATGGACCTTATCAC
CCTGAGACGTTGGGAGTGTACAGCAACCTTGCTGGCACATATGATGCTGTTGGCAGGTAT
GTCAATCGCTACATCTACTAA