Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062931
CDS Infomation

pacid=37460866 polypeptide=PGSC0003DMP400042354 locus=PGSC0003DMG400024491 ID=PGSC0003DMT400062931.v4.03 annot-version=v4.03
Sequence

ATGATTCAAAGATTTGATCGGAATGATCGCCGGATTTTGACATTCCCGGCGGTACATCCA
TGTGAGGGGATATCTCCGGCTACCCTTTTAGATTCTTTGATTACTCTATCTCAGGGCATA
TGCACTTTCAAATCGAAATTCTTTCCATCTCAACGGAGAAATGTTCGCGAAATGATTAGG
CAAGTGGGGATCCTCTTGATTTTTTTCGAGGAAATCCGGGATCATCTACCTAGTGATAGA
GATTCCATTGTTCTTTGTTTTGCAGAACTACACACAACGTTTCAAAAGATTAAGTTTTTA
TTAGATGATTGTATGCGTGAGGGGGCGAAAACTTGGATGCTTATGAAATCCCACTCTGTA
GCGAGTCAATTTCAAGTTTTGGTTAGAACTGTGGCTACTGCACTTGATGTTCTTCCTTTG
AATTCTCTTAATGTTTCCAGAGAAATCAAGGAGTTGGTTCTAATGGTGGCTAATCAAGCA
CAGAGGGCGAAAATGGAGCTCGACCCGGAAGACGAAGAAGCTGTGAAGAGAATAATTTTG
CTTTTGAACCAATTTGAGAATAAGTTTCAGCCTGACCCCCGTGTAATCAAGAAATTTCTG
GATTATCTTGATATCACAACCTGGGCAGAATGTCACAAGGAGATTAAATTCTTAGAGGAT
GAGATTAATTTCGAATGCTCGGAGAATTACGAACGAGAAGTACCTATGCTAAGCAGTTTA
GTTGGATTCTTGAGCTATTGCAGGGGAATTTTGTTTGAGGACTCTGTTTATGGGAACACT
GATCAATCAGATGGAACATCCAACCTGGAAACTCTGAGTTGCTTGAATCCTGAGGATTTC
AGGTGTCCCATTTCTCTGGAACTCATGACGGATCCAGTGACAGTGTCCACGGGCCAGACT
TATGATCGCGCTTCGATTCATAAATGGCTCAAGTCAGGGAACCTCCTCTGTCCCAAAACA
GGGGAGACATTACAGAGCACAGAATTAGTACCTAATTCCTCTCTGCGGAACCTCATCCAA
CAATTCTGTGCTGATAATGGAATATCACTAGCTAAATCAAGGAAGAAGAATCGTGATATA
TCGCGGACTATTTTGCCAGGAAATCCAGCAGCGGCGGAAGCAATCAAATTCCTCTCCGAA
TTTCTCGCGTGCAGGCTGTATTTTGGTTCTGATCAGCAGAAAACCAAGGCTGCTTATGAA
ATTCGCTTGCTTGCAAAATCAAATATATTCAACCGGTCCGTGTTAATCGAAGCTGCAACA
ATCACAGCACTCTTACAAATGCTTAGTTCAAATGATCCATCTATGCAAGAGCATTCAATT
TCCGCCTTGCTCAAACTATCGAAACATTCCAACGGAAAGAAAGTGATCATGGAAAATAGG
GGCCTGAATTCGATTCTTGGAGTTCTCAAGAATGGCCTAAAGCTAGAATCAAAGCAAATT
GCAGCAGCGATAATTTTCTACATCTCTTCACCTCGTGAATACCGCAAGCTAGTAGGCGAA
AATCCAGAAGTATTTCCAGCTTTAGTGGACTTAATCAAACACGGAACAAGTTGCGGGAAA
AAGAACGCGATTGTTGCAATATTCGGGCTGCTGTTGAGTCACAGGAACCACGAGAGAGCA
CTTGCAGCTGGAACAGTTCTAGCACTAGTCAATCTTTTATCTTCTTCAGATAAAGTTGAA
CTAAACACAGACGCACTCGCGGTTCTAGCTACATTAGCCGAAAGAACAGAAGGGTCTTTC
GTGATTTTAGAAGCTTCAGCATTACCAGTAATCTTGAATCAATTACAGAACACAACATCT
CGAGCGGGAAAAGAGTATTGTGTTTCCATTTTGTTGTCATTATGTGTCAATAGTGGTGCG
GAGGTATTAGCCGCTCTGGTAAGAGAAAAGGCGCTTATGCCACTTCTTTATTCACTTTTA
ACAGAAGGAACCAGCCAAGCAAAGAAGAGGACACGGTCTCTTATCAAAATTCTACAGAGA
TTTTGTGAAACGAGCACTTCTAGGCTTGTGAGTGAAGTTCCACAAGAACAATTTATTGAT
GTAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042354
PEP Infomation

pacid=37460866 transcript=PGSC0003DMT400062931 locus=PGSC0003DMG400024491 ID=PGSC0003DMT400062931.v4.03 annot-version=v4.03
Sequence

MIQRFDRNDRRILTFPAVHPCEGISPATLLDSLITLSQGICTFKSKFFPSQRRNVREMIR
QVGILLIFFEEIRDHLPSDRDSIVLCFAELHTTFQKIKFLLDDCMREGAKTWMLMKSHSV
ASQFQVLVRTVATALDVLPLNSLNVSREIKELVLMVANQAQRAKMELDPEDEEAVKRIIL
LLNQFENKFQPDPRVIKKFLDYLDITTWAECHKEIKFLEDEINFECSENYEREVPMLSSL
VGFLSYCRGILFEDSVYGNTDQSDGTSNLETLSCLNPEDFRCPISLELMTDPVTVSTGQT
YDRASIHKWLKSGNLLCPKTGETLQSTELVPNSSLRNLIQQFCADNGISLAKSRKKNRDI
SRTILPGNPAAAEAIKFLSEFLACRLYFGSDQQKTKAAYEIRLLAKSNIFNRSVLIEAAT
ITALLQMLSSNDPSMQEHSISALLKLSKHSNGKKVIMENRGLNSILGVLKNGLKLESKQI
AAAIIFYISSPREYRKLVGENPEVFPALVDLIKHGTSCGKKNAIVAIFGLLLSHRNHERA
LAAGTVLALVNLLSSSDKVELNTDALAVLATLAERTEGSFVILEASALPVILNQLQNTTS
RAGKEYCVSILLSLCVNSGAEVLAALVREKALMPLLYSLLTEGTSQAKKRTRSLIKILQR
FCETSTSRLVSEVPQEQFIDVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400062931
Transcript Infomation

pacid=37460866 locus=PGSC0003DMG400024491 ID=PGSC0003DMT400062931.v4.03 annot-version=v4.03
Sequence

ATGATTCAAAGATTTGATCGGAATGATCGCCGGATTTTGACATTCCCGGCGGTACATCCA
TGTGAGGGGATATCTCCGGCTACCCTTTTAGATTCTTTGATTACTCTATCTCAGGGCATA
TGCACTTTCAAATCGAAATTCTTTCCATCTCAACGGAGAAATGTTCGCGAAATGATTAGG
CAAGTGGGGATCCTCTTGATTTTTTTCGAGGAAATCCGGGATCATCTACCTAGTGATAGA
GATTCCATTGTTCTTTGTTTTGCAGAACTACACACAACGTTTCAAAAGATTAAGTTTTTA
TTAGATGATTGTATGCGTGAGGGGGCGAAAACTTGGATGCTTATGAAATCCCACTCTGTA
GCGAGTCAATTTCAAGTTTTGGTTAGAACTGTGGCTACTGCACTTGATGTTCTTCCTTTG
AATTCTCTTAATGTTTCCAGAGAAATCAAGGAGTTGGTTCTAATGGTGGCTAATCAAGCA
CAGAGGGCGAAAATGGAGCTCGACCCGGAAGACGAAGAAGCTGTGAAGAGAATAATTTTG
CTTTTGAACCAATTTGAGAATAAGTTTCAGCCTGACCCCCGTGTAATCAAGAAATTTCTG
GATTATCTTGATATCACAACCTGGGCAGAATGTCACAAGGAGATTAAATTCTTAGAGGAT
GAGATTAATTTCGAATGCTCGGAGAATTACGAACGAGAAGTACCTATGCTAAGCAGTTTA
GTTGGATTCTTGAGCTATTGCAGGGGAATTTTGTTTGAGGACTCTGTTTATGGGAACACT
GATCAATCAGATGGAACATCCAACCTGGAAACTCTGAGTTGCTTGAATCCTGAGGATTTC
AGGTGTCCCATTTCTCTGGAACTCATGACGGATCCAGTGACAGTGTCCACGGGCCAGACT
TATGATCGCGCTTCGATTCATAAATGGCTCAAGTCAGGGAACCTCCTCTGTCCCAAAACA
GGGGAGACATTACAGAGCACAGAATTAGTACCTAATTCCTCTCTGCGGAACCTCATCCAA
CAATTCTGTGCTGATAATGGAATATCACTAGCTAAATCAAGGAAGAAGAATCGTGATATA
TCGCGGACTATTTTGCCAGGAAATCCAGCAGCGGCGGAAGCAATCAAATTCCTCTCCGAA
TTTCTCGCGTGCAGGCTGTATTTTGGTTCTGATCAGCAGAAAACCAAGGCTGCTTATGAA
ATTCGCTTGCTTGCAAAATCAAATATATTCAACCGGTCCGTGTTAATCGAAGCTGCAACA
ATCACAGCACTCTTACAAATGCTTAGTTCAAATGATCCATCTATGCAAGAGCATTCAATT
TCCGCCTTGCTCAAACTATCGAAACATTCCAACGGAAAGAAAGTGATCATGGAAAATAGG
GGCCTGAATTCGATTCTTGGAGTTCTCAAGAATGGCCTAAAGCTAGAATCAAAGCAAATT
GCAGCAGCGATAATTTTCTACATCTCTTCACCTCGTGAATACCGCAAGCTAGTAGGCGAA
AATCCAGAAGTATTTCCAGCTTTAGTGGACTTAATCAAACACGGAACAAGTTGCGGGAAA
AAGAACGCGATTGTTGCAATATTCGGGCTGCTGTTGAGTCACAGGAACCACGAGAGAGCA
CTTGCAGCTGGAACAGTTCTAGCACTAGTCAATCTTTTATCTTCTTCAGATAAAGTTGAA
CTAAACACAGACGCACTCGCGGTTCTAGCTACATTAGCCGAAAGAACAGAAGGGTCTTTC
GTGATTTTAGAAGCTTCAGCATTACCAGTAATCTTGAATCAATTACAGAACACAACATCT
CGAGCGGGAAAAGAGTATTGTGTTTCCATTTTGTTGTCATTATGTGTCAATAGTGGTGCG
GAGGTATTAGCCGCTCTGGTAAGAGAAAAGGCGCTTATGCCACTTCTTTATTCACTTTTA
ACAGAAGGAACCAGCCAAGCAAAGAAGAGGACACGGTCTCTTATCAAAATTCTACAGAGA
TTTTGTGAAACGAGCACTTCTAGGCTTGTGAGTGAAGTTCCACAAGAACAATTTATTGAT
GTAAGGTGA