Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062930
CDS Infomation

pacid=37459741 polypeptide=PGSC0003DMP400042353 locus=PGSC0003DMG400024490 ID=PGSC0003DMT400062930.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCGTAGACTTTCTTCTTTACTCTCTCGTTCTCTCCACCTTCCTTCTGCTTCT
GCTTCTCTAGGAAGAAGCCATGGTGTGGCAAGGCACATCAACAGGTTTAGTACAGCTGCA
GCTGTTGAGGAATTAATCACTCCACCTGTCCAAGTTAATCACACCAAGCTTCTAATCAAT
GGACAATTTGTTGATTCTGCATCTGGAAAAACGTTCCCAACTTTGGATCCAAGAACTGGG
GAAGTCATAGCAAATGTTGCTGAAGGTGATCTCGAAGATGTTAATCGCGCTGTGGCTGCT
GCTCGCAAGGCATTTGACGAGGGACCATGGCCCAAAATGAGTGCTTATGAAAGGTCACGG
ATAATGCTAAAGTTTGCTGATTTGGTGGAGAAACACAATGATGAGATTGCAGCTTTAGAA
ACATGGGATAATGGCAAGCCATATTTGCAGGCTGCCCAAGCTGAAGTACCTTCTTTTGTG
CGATTATTTCGGTACTATGCTGGTTGGGCGGATAAAATCCATGGTCTAACTGTTCCAGCT
GATGGGCCATACCATGTACAAACTTTACATGAACCAATTGGGGTTGCTGGTCAAATAATT
CCATGGAACTTTCCCCTTCTTATGATGGCCTGGAAAGTTGGGCCTGCCCTAGCATGCGGT
AACACTATTGTCCTGAAGACTGCTGAGCAAACTCCACTGACTGCTCTTTATGTTGCAAAC
TTATTCCATGAGGCTGGTCTTCCTCCAGGTGTTTTAAATATTGTTTCTGGTTTCGGACCT
ACCGCTGGTGCTGCACTTGCTAGTCATATGGATGTAGACAAGCTTGCTTTCACTGGATCA
ACGGAAACTGGACAAACAGTTCTTCAACTGGCTGCCAAAAGCAATCTGAAACCAGTTACC
CTCGAACTAGGAGGGAAATCACCTTTCATTATATGTGAGGATGCTGACGTTGATCATGCT
GTTGAGCTAGCACATTTTGCACTCTTCTTTAATCAGGGCCAATGTTGTTGTGCTGGTTCT
CGTACCTATGTACATGAACGAGTATATGATGAATTTGTAGAGAAGGCAAAGGCACGTGCA
ATGAGACGTGTAGTTGGTGATCCCTTCAAGAAAGGTGTTGAACAAGGTCCTCAGATCGAC
TCGGAGCAATTTAAGAAGATACTTAGGTACATAAGAGAAGGCCGTGACAGCTCTGCCACC
CTTGAATGTGGTGGTGATAGAATTGGCTCCAAAGGCTACTTTATTCAGCCCACTGTGTTC
TCAAATGTCAAGGAGGACATGTCGATAGCACAGGATGAGATTTTTGGTCCAGTGCAATGT
GTCTTCAAATTCAAGGATATTGGCGAAGTAATAAAGAGAGCAAACAACACTCGCTATGGT
CTAGCAGCAGGCGTTTTCACAAAGAACATTGACACAGCAAACACCTTGACCCGAGGATTG
AGAGCTGGAACGGTGTGGATCAACTGCTATGATATATTTGATGCTGGAATTCCTTTTGGA
GGGTACAAGATGAGTGGCACGGGCAGGGAAAAGGGTATTTACAGCCTTAACAACTACTTA
CAGGTGAAGGCTGTTGTTACTCCATTGAAGAATCCGGCTTGGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400042353
PEP Infomation

pacid=37459741 transcript=PGSC0003DMT400062930 locus=PGSC0003DMG400024490 ID=PGSC0003DMT400062930.v4.03 annot-version=v4.03
Sequence

MAARRLSSLLSRSLHLPSASASLGRSHGVARHINRFSTAAAVEELITPPVQVNHTKLLIN
GQFVDSASGKTFPTLDPRTGEVIANVAEGDLEDVNRAVAAARKAFDEGPWPKMSAYERSR
IMLKFADLVEKHNDEIAALETWDNGKPYLQAAQAEVPSFVRLFRYYAGWADKIHGLTVPA
DGPYHVQTLHEPIGVAGQIIPWNFPLLMMAWKVGPALACGNTIVLKTAEQTPLTALYVAN
LFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTETGQTVLQLAAKSNLKPVT
LELGGKSPFIICEDADVDHAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARA
MRRVVGDPFKKGVEQGPQIDSEQFKKILRYIREGRDSSATLECGGDRIGSKGYFIQPTVF
SNVKEDMSIAQDEIFGPVQCVFKFKDIGEVIKRANNTRYGLAAGVFTKNIDTANTLTRGL
RAGTVWINCYDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVTPLKNPAWI*

Transcript Sequence

Transcript ID

PGSC0003DMT400062930
Transcript Infomation

pacid=37459741 locus=PGSC0003DMG400024490 ID=PGSC0003DMT400062930.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCGTAGACTTTCTTCTTTACTCTCTCGTTCTCTCCACCTTCCTTCTGCTTCT
GCTTCTCTAGGAAGAAGCCATGGTGTGGCAAGGCACATCAACAGGTTTAGTACAGCTGCA
GCTGTTGAGGAATTAATCACTCCACCTGTCCAAGTTAATCACACCAAGCTTCTAATCAAT
GGACAATTTGTTGATTCTGCATCTGGAAAAACGTTCCCAACTTTGGATCCAAGAACTGGG
GAAGTCATAGCAAATGTTGCTGAAGGTGATCTCGAAGATGTTAATCGCGCTGTGGCTGCT
GCTCGCAAGGCATTTGACGAGGGACCATGGCCCAAAATGAGTGCTTATGAAAGGTCACGG
ATAATGCTAAAGTTTGCTGATTTGGTGGAGAAACACAATGATGAGATTGCAGCTTTAGAA
ACATGGGATAATGGCAAGCCATATTTGCAGGCTGCCCAAGCTGAAGTACCTTCTTTTGTG
CGATTATTTCGGTACTATGCTGGTTGGGCGGATAAAATCCATGGTCTAACTGTTCCAGCT
GATGGGCCATACCATGTACAAACTTTACATGAACCAATTGGGGTTGCTGGTCAAATAATT
CCATGGAACTTTCCCCTTCTTATGATGGCCTGGAAAGTTGGGCCTGCCCTAGCATGCGGT
AACACTATTGTCCTGAAGACTGCTGAGCAAACTCCACTGACTGCTCTTTATGTTGCAAAC
TTATTCCATGAGGCTGGTCTTCCTCCAGGTGTTTTAAATATTGTTTCTGGTTTCGGACCT
ACCGCTGGTGCTGCACTTGCTAGTCATATGGATGTAGACAAGCTTGCTTTCACTGGATCA
ACGGAAACTGGACAAACAGTTCTTCAACTGGCTGCCAAAAGCAATCTGAAACCAGTTACC
CTCGAACTAGGAGGGAAATCACCTTTCATTATATGTGAGGATGCTGACGTTGATCATGCT
GTTGAGCTAGCACATTTTGCACTCTTCTTTAATCAGGGCCAATGTTGTTGTGCTGGTTCT
CGTACCTATGTACATGAACGAGTATATGATGAATTTGTAGAGAAGGCAAAGGCACGTGCA
ATGAGACGTGTAGTTGGTGATCCCTTCAAGAAAGGTGTTGAACAAGGTCCTCAGATCGAC
TCGGAGCAATTTAAGAAGATACTTAGGTACATAAGAGAAGGCCGTGACAGCTCTGCCACC
CTTGAATGTGGTGGTGATAGAATTGGCTCCAAAGGCTACTTTATTCAGCCCACTGTGTTC
TCAAATGTCAAGGAGGACATGTCGATAGCACAGGATGAGATTTTTGGTCCAGTGCAATGT
GTCTTCAAATTCAAGGATATTGGCGAAGTAATAAAGAGAGCAAACAACACTCGCTATGGT
CTAGCAGCAGGCGTTTTCACAAAGAACATTGACACAGCAAACACCTTGACCCGAGGATTG
AGAGCTGGAACGGTGTGGATCAACTGCTATGATATATTTGATGCTGGAATTCCTTTTGGA
GGGTACAAGATGAGTGGCACGGGCAGGGAAAAGGGTATTTACAGCCTTAACAACTACTTA
CAGGTGAAGGCTGTTGTTACTCCATTGAAGAATCCGGCTTGGATATAA