Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062883
CDS Infomation

pacid=37462263 polypeptide=PGSC0003DMP400042328 locus=PGSC0003DMG400024477 ID=PGSC0003DMT400062883.v4.03 annot-version=v4.03
Sequence

ATGTTATTCAGAAAACTGCAGGAAAAATTGAATCCAGGGCATTTAAAATTACAGTTTTCG
AACAACGTGCGTGGTCCAATATATACTGGGCTCCCCATAGGAGATCAAGAGGGCTCCCCC
TTAGATCTACATTTAATTGACTGCAGTACTCAAAATATTGTGAATCCTGGGCCAGAAGCA
ACAACAGAAGTGGAAATAGTTGTCCTTGAGAAAGATTTTACAAGGTATGGTGGCGAAAAA
TCGCTGATTCGTGGAAATCCTCGAGTCATCGTGAAAAATGGGAGTGTTTCTGTAAGTCAT
ATTTCATTCAAACATACTAGAGATACTATGAGAAACCGTGAGTTGAGACTAGGTGCATTA
AGAGTTGGGACCAGAATCGTGGAAGCAGTCACTGAACCATTCTTTGTCAAGGATCGTCGT
AACATAAGCAAGAGATTGAAGCCCCTATTTCTTCATGATGAAGTTTGGAAACTGGAAACA
ATTGGCAAAAACGGTCCTTTCCATGAACGTTTGATGAAGGAAAACATTAAAACAGTCAAC
GACTTGTTAACTCACTACTTTTTGAACCGTGAAAACCTACTCAAAATCCTTGGCAGGCAT
ATGAACGTGGAGAAATTGGATGCAGCAGTAAATCAGGCAAAGAATAAACTTGACTTGAAA
AGATATGTGTATCCCCACGAAAATCCACTAGTGATATTTACTGATGTGGGAGAATTGACT
GGAGTAGGACTGGAAGAAGAGGGTCAGTTCTTCTCTGTCCAACAGCTCACTGATCAAACT
CAAAAGGCTATTGCAATGGAAATGGTAAAAAAAGCCTTTCAAGAAGGCCGCCAGAATTTC
AAGGTTTTATTGGATGATGATAGTTTTTATAATGGATTCACTTCCGATGAGGCTTATAAT
TCTGTAATTGACACACAACAGCTGCAACCAGTGCCTAATAATGTTGCTAATGACATGCCA
AACACAAGTTTGATAGTGAATAATTATGACATTATAAGCCAAATCAATAGCTTATCCACA
ACTTCTACTGGTGAATTACCACATCAATTTCATCCAGATGACAACGACTTCATCATCTAC
CAAGATCTTTCCCCAATCATCTGGAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042328
PEP Infomation

pacid=37462263 transcript=PGSC0003DMT400062883 locus=PGSC0003DMG400024477 ID=PGSC0003DMT400062883.v4.03 annot-version=v4.03
Sequence

MLFRKLQEKLNPGHLKLQFSNNVRGPIYTGLPIGDQEGSPLDLHLIDCSTQNIVNPGPEA
TTEVEIVVLEKDFTRYGGEKSLIRGNPRVIVKNGSVSVSHISFKHTRDTMRNRELRLGAL
RVGTRIVEAVTEPFFVKDRRNISKRLKPLFLHDEVWKLETIGKNGPFHERLMKENIKTVN
DLLTHYFLNRENLLKILGRHMNVEKLDAAVNQAKNKLDLKRYVYPHENPLVIFTDVGELT
GVGLEEEGQFFSVQQLTDQTQKAIAMEMVKKAFQEGRQNFKVLLDDDSFYNGFTSDEAYN
SVIDTQQLQPVPNNVANDMPNTSLIVNNYDIISQINSLSTTSTGELPHQFHPDDNDFIIY
QDLSPIIWN*

Transcript Sequence

Transcript ID

PGSC0003DMT400062883
Transcript Infomation

pacid=37462263 locus=PGSC0003DMG400024477 ID=PGSC0003DMT400062883.v4.03 annot-version=v4.03
Sequence

ATGTTATTCAGAAAACTGCAGGAAAAATTGAATCCAGGGCATTTAAAATTACAGTTTTCG
AACAACGTGCGTGGTCCAATATATACTGGGCTCCCCATAGGAGATCAAGAGGGCTCCCCC
TTAGATCTACATTTAATTGACTGCAGTACTCAAAATATTGTGAATCCTGGGCCAGAAGCA
ACAACAGAAGTGGAAATAGTTGTCCTTGAGAAAGATTTTACAAGGTATGGTGGCGAAAAA
TCGCTGATTCGTGGAAATCCTCGAGTCATCGTGAAAAATGGGAGTGTTTCTGTAAGTCAT
ATTTCATTCAAACATACTAGAGATACTATGAGAAACCGTGAGTTGAGACTAGGTGCATTA
AGAGTTGGGACCAGAATCGTGGAAGCAGTCACTGAACCATTCTTTGTCAAGGATCGTCGT
AACATAAGCAAGAGATTGAAGCCCCTATTTCTTCATGATGAAGTTTGGAAACTGGAAACA
ATTGGCAAAAACGGTCCTTTCCATGAACGTTTGATGAAGGAAAACATTAAAACAGTCAAC
GACTTGTTAACTCACTACTTTTTGAACCGTGAAAACCTACTCAAAATCCTTGGCAGGCAT
ATGAACGTGGAGAAATTGGATGCAGCAGTAAATCAGGCAAAGAATAAACTTGACTTGAAA
AGATATGTGTATCCCCACGAAAATCCACTAGTGATATTTACTGATGTGGGAGAATTGACT
GGAGTAGGACTGGAAGAAGAGGGTCAGTTCTTCTCTGTCCAACAGCTCACTGATCAAACT
CAAAAGGCTATTGCAATGGAAATGGTAAAAAAAGCCTTTCAAGAAGGCCGCCAGAATTTC
AAGGTTTTATTGGATGATGATAGTTTTTATAATGGATTCACTTCCGATGAGGCTTATAAT
TCTGTAATTGACACACAACAGCTGCAACCAGTGCCTAATAATGTTGCTAATGACATGCCA
AACACAAGTTTGATAGTGAATAATTATGACATTATAAGCCAAATCAATAGCTTATCCACA
ACTTCTACTGGTGAATTACCACATCAATTTCATCCAGATGACAACGACTTCATCATCTAC
CAAGATCTTTCCCCAATCATCTGGAATTAA