Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062881
CDS Infomation

pacid=37460662 polypeptide=PGSC0003DMP400042326 locus=PGSC0003DMG400024475 ID=PGSC0003DMT400062881.v4.03 annot-version=v4.03
Sequence

ATGTCGATGAAACGGCAATCGCAAGACGATTCCAAGTCTAGACTCGATGCAGGTTCTTCT
GAGGATAAACGTCGCCGGAGTTTGCCTTCTCTCAGCAGTGTGATTACAGAAGTAATGAAT
ATGAGTAAAGTGCAACATTTTATGGAGCCAGTTTTGGAGCCACTTATTCGTAAAGTGGTA
AAAGAGGAAGTTGAATTGGCTCTCAGGAAATACATGACCACCATTAAGCGGAATTGTGGG
AAAGATGTATTTGCTTGTGAACTTCGAAGCCTGAAACTGAAGTTTTTAGATCTCATCTCT
CCCCCAGTATTTACTGGAACTCGCATAGAAGGAGAGGAATCTAGTTTGAAAGTAGCCCTG
GTTGATGTTCTTACTGGGGAAGTTGTCTGTAGTGGTCCTGAATCCTGTGCAAAAGTTGAA
ATAGTAGTACTCGAAGGAGATTTTGACGGTGATGATGGGGACAATTGGACTGCAGATGAA
TTTAAGAACAACATTGTGAGAGAAAGGGAAGGAAAGAAACCTCTCCTTACTGGGGATGCA
TTTTTGTATCTTAAGGAGGGCATTGGCTGGTTGAGTGATATTTCATTTACTGATAACTCA
AGCTGGACAAGAAGTCGTAAATTCAGGCTGGGTGCTAGGATTGTTGATAGCTTTGAAGGG
ATCAGTGTACGAGAGGCGAAGACAGAATCCTTCATTGTCAGGGATCACCGAGGAGAGTTG
TACAAGAAGCACCATCCCCCTTCTCTTTCAGATGAGGTATGGAGGCTGGAAAAGATTGGC
AAAGATGGAGCTTTTCACAGACGTTTGAGCAAGGAAAGAGTCAATACCGTGAAAGATTTT
CTGACTCTACTCTATCTAGATCCTACAAGGCTTCGGAATGTTCTTGGGACAGGTATGTCC
ACCAAAATGTGGGAAGTCACGGTTGAACATGCTCGAACTTGCTTACTTGACAAGAAAGTG
TACTTATACTACACATCTGTATCTGGTCCAAAAACCGGTGTTGTTTTTAACATTGTTGGA
CAAGTGATGGGGCTTTTTCCAGACTGCCAGTTTGTTTCTGCTGAGAAATTGTCTGAAACT
CAAAAGGATGATGCTCGTAATTTGGTGATTTGTGCATTCAGACACTGGGAAGAAGTAGTC
TCTTTTGAGGACGAGTCCTCTCTTATGGATTGGGTTATGCAAATTTCCACTGTTCAGTTC
CCCTCGAACTCACCCATGGTGGGCAACTCTGATACCAGTGACGATGTTTTAGCTTCCCAG
AAGGTTAGCAGAAGTGAATATCAGCCACTAAGTGCGTCAACGCCTGATATCATGCCATCT
TTCTGTTCTATTGCTGGTTTCAGCAGCTTGGATGACTATGTCTTGCATGGTATAGACAAC
ATGGATGTTGCGTTTGACCAACCATTAAATTTCCCCGGGCAAGACACCAACTCCTTGATG
GCTGATGCTGATTCTATAACTCCCCCATCATTTTGTGATGATGATCATCTGCCTTTCTTT
GATACCGACTATTCCCTTCCCAGTTCAAGCTTTGCTCCATCACCGGATCTACAATGTGCT
GTCAACAGCTTTCTTGCTCATAGTAGTTCAATTGTTCCTCTGGATAAAGCTCAAAGGAGA
TGGAAGATGCTATTTAGTGTTCTCAGATGGTTCTCTGTAAGGAGAATCGTGAACAAAAGA
ACCATCATATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042326
PEP Infomation

pacid=37460662 transcript=PGSC0003DMT400062881 locus=PGSC0003DMG400024475 ID=PGSC0003DMT400062881.v4.03 annot-version=v4.03
Sequence

MSMKRQSQDDSKSRLDAGSSEDKRRRSLPSLSSVITEVMNMSKVQHFMEPVLEPLIRKVV
KEEVELALRKYMTTIKRNCGKDVFACELRSLKLKFLDLISPPVFTGTRIEGEESSLKVAL
VDVLTGEVVCSGPESCAKVEIVVLEGDFDGDDGDNWTADEFKNNIVREREGKKPLLTGDA
FLYLKEGIGWLSDISFTDNSSWTRSRKFRLGARIVDSFEGISVREAKTESFIVRDHRGEL
YKKHHPPSLSDEVWRLEKIGKDGAFHRRLSKERVNTVKDFLTLLYLDPTRLRNVLGTGMS
TKMWEVTVEHARTCLLDKKVYLYYTSVSGPKTGVVFNIVGQVMGLFPDCQFVSAEKLSET
QKDDARNLVICAFRHWEEVVSFEDESSLMDWVMQISTVQFPSNSPMVGNSDTSDDVLASQ
KVSRSEYQPLSASTPDIMPSFCSIAGFSSLDDYVLHGIDNMDVAFDQPLNFPGQDTNSLM
ADADSITPPSFCDDDHLPFFDTDYSLPSSSFAPSPDLQCAVNSFLAHSSSIVPLDKAQRR
WKMLFSVLRWFSVRRIVNKRTIIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062881
Transcript Infomation

pacid=37460662 locus=PGSC0003DMG400024475 ID=PGSC0003DMT400062881.v4.03 annot-version=v4.03
Sequence

ATGTCGATGAAACGGCAATCGCAAGACGATTCCAAGTCTAGACTCGATGCAGGTTCTTCT
GAGGATAAACGTCGCCGGAGTTTGCCTTCTCTCAGCAGTGTGATTACAGAAGTAATGAAT
ATGAGTAAAGTGCAACATTTTATGGAGCCAGTTTTGGAGCCACTTATTCGTAAAGTGGTA
AAAGAGGAAGTTGAATTGGCTCTCAGGAAATACATGACCACCATTAAGCGGAATTGTGGG
AAAGATGTATTTGCTTGTGAACTTCGAAGCCTGAAACTGAAGTTTTTAGATCTCATCTCT
CCCCCAGTATTTACTGGAACTCGCATAGAAGGAGAGGAATCTAGTTTGAAAGTAGCCCTG
GTTGATGTTCTTACTGGGGAAGTTGTCTGTAGTGGTCCTGAATCCTGTGCAAAAGTTGAA
ATAGTAGTACTCGAAGGAGATTTTGACGGTGATGATGGGGACAATTGGACTGCAGATGAA
TTTAAGAACAACATTGTGAGAGAAAGGGAAGGAAAGAAACCTCTCCTTACTGGGGATGCA
TTTTTGTATCTTAAGGAGGGCATTGGCTGGTTGAGTGATATTTCATTTACTGATAACTCA
AGCTGGACAAGAAGTCGTAAATTCAGGCTGGGTGCTAGGATTGTTGATAGCTTTGAAGGG
ATCAGTGTACGAGAGGCGAAGACAGAATCCTTCATTGTCAGGGATCACCGAGGAGAGTTG
TACAAGAAGCACCATCCCCCTTCTCTTTCAGATGAGGTATGGAGGCTGGAAAAGATTGGC
AAAGATGGAGCTTTTCACAGACGTTTGAGCAAGGAAAGAGTCAATACCGTGAAAGATTTT
CTGACTCTACTCTATCTAGATCCTACAAGGCTTCGGAATGTTCTTGGGACAGGTATGTCC
ACCAAAATGTGGGAAGTCACGGTTGAACATGCTCGAACTTGCTTACTTGACAAGAAAGTG
TACTTATACTACACATCTGTATCTGGTCCAAAAACCGGTGTTGTTTTTAACATTGTTGGA
CAAGTGATGGGGCTTTTTCCAGACTGCCAGTTTGTTTCTGCTGAGAAATTGTCTGAAACT
CAAAAGGATGATGCTCGTAATTTGGTGATTTGTGCATTCAGACACTGGGAAGAAGTAGTC
TCTTTTGAGGACGAGTCCTCTCTTATGGATTGGGTTATGCAAATTTCCACTGTTCAGTTC
CCCTCGAACTCACCCATGGTGGGCAACTCTGATACCAGTGACGATGTTTTAGCTTCCCAG
AAGGTTAGCAGAAGTGAATATCAGCCACTAAGTGCGTCAACGCCTGATATCATGCCATCT
TTCTGTTCTATTGCTGGTTTCAGCAGCTTGGATGACTATGTCTTGCATGGTATAGACAAC
ATGGATGTTGCGTTTGACCAACCATTAAATTTCCCCGGGCAAGACACCAACTCCTTGATG
GCTGATGCTGATTCTATAACTCCCCCATCATTTTGTGATGATGATCATCTGCCTTTCTTT
GATACCGACTATTCCCTTCCCAGTTCAAGCTTTGCTCCATCACCGGATCTACAATGTGCT
GTCAACAGCTTTCTTGCTCATAGTAGTTCAATTGTTCCTCTGGATAAAGCTCAAAGGAGA
TGGAAGATGCTATTTAGTGTTCTCAGATGGTTCTCTGTAAGGAGAATCGTGAACAAAAGA
ACCATCATATCTTGA