Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062863
CDS Infomation

pacid=37462114 polypeptide=PGSC0003DMP400042309 locus=PGSC0003DMG400024471 ID=PGSC0003DMT400062863.v4.03 annot-version=v4.03
Sequence

ATGTATTCCCCTTTCAGAAAAGCTAATGGGGAAACAGGTAGACATGGCAGAAGCAAATCC
GTGTGGAATATCTTTGTTTACAGGCCATCTTCTTCTAAATTTGATAAAAGGGATCCTCCA
AAAGAACTCATCTGCCCCATTTATGGGTGCTTGATGTTTGATCCAGTTGTGGTGTCTACT
GGCCAGAGTTTTGAGCGGACTTCTGTTCAAGTTTGTAAGGATTTGGAGTTTAAACCCCAA
CTTCAAAACGGGTTAAACCCGGATTTCACTAACGTGATACCGAATTTAGCTCTGAGGACG
ACAATTCTCACCTGGTGTGAAAAGTCAGGGGCGGAGAAGCCGCAGCAGCCGGATTATTAC
GCTGTTGAGTCTGTTGTTCGTGCTTCGATGGCTTCGACTTCTTCTTCTTCGATCTCTAGA
GAGGATTCTAGAATACGGAGAGAAGATTCTAGAATACGGGTGTCAGAGAGGGATTTGTTC
AAGGGGGTAACGGAGAATCCACCTATGCTTCTCTCTCACGCCGCATCGGAAATGAAATCG
AGGAATAATCATTTCTACTCTTCTTCGAGCTCTGAAGAATCTGTCATCGCTAACAACTCG
CCGCTACTCCCTTTTAAGACTCGTCTCTCCAGCTACTCCTCTTTGTCGTCGCAATCGACT
TCGTCGGAGATAATCTCCGGTGAAGTCCCGTCGTCTGCTTCCACGTCATCGGAAGATGAT
TATTACGTTGTTCAATTTAAGAAATTGGACGTTTATGAACAGGAACAAGCTGTAATTTCA
CTGAGAAAAAGTACCAGAACCGATGAAGAAGCTAGGGTTTCACTGTGCACGCCGCGGCTT
TTATCGGCTCTCAAGCCGTTACTAGTCTCGAGGTACGCCGGAGTTCAGCCGAACGCCGTC
GCCGCATTGGTCAACCTCTCGTTGGCAGAAATCAACAAAGTGAAAATCGTTCGAGCCGGA
ATTACCTCTCTGCTAATTGATCTTCTCAAAGGCGGCTCGGAGGAGACCAAAGAGCACGCA
GCCGGCGCCATATTCAGCTTAGCGCTGGAAGATGACAACAAGACAGCAATTGGAGTATTA
GGCGCATTGCAGCCGCTTTTACATGCTCTGAGGTCCGGGACAGAGCGGACTCGTCACGAC
TCCGCATTAGCCCTTTATCATTTGACCTTAGTGCAGAGTAACCGAGTTAAGCTCGTTAAA
CTCGGAGCTGCAAATACACTCCTGGGATTGCTCAAAGCCAGCGATATAGCGGGTAAAGTA
ATGCTGGTTGTGTGCAATTTGGCAGTGTGTCAAGAGGGGAAATCAGCATTGCTGGACGCC
AATGCAGTGGATGTACTGTTGGGGATACTGAGAAATTGGAATAAATTGGATGAGTCAACT
CGGGAGAATTCCGTGGCGGCTCTATACTCACTGAGTCAGGGGAGTTTGAGGTTCAAGAGT
ATGGCGAAAGAGGCGAAGGCGGGTGAAGTATTGCAAGTGGTGGTGGAGCGAGGAAGCGGA
CGGGCGAGGGAGAAGGCAAAGAAGATGTTGATCGCTATGCAAAGAAGGGTAAAGGAGTAT
GACGATGAAGAAGAGGATGCAAACTGGGAAGGAATACTTGAAGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400042309
PEP Infomation

pacid=37462114 transcript=PGSC0003DMT400062863 locus=PGSC0003DMG400024471 ID=PGSC0003DMT400062863.v4.03 annot-version=v4.03
Sequence

MYSPFRKANGETGRHGRSKSVWNIFVYRPSSSKFDKRDPPKELICPIYGCLMFDPVVVST
GQSFERTSVQVCKDLEFKPQLQNGLNPDFTNVIPNLALRTTILTWCEKSGAEKPQQPDYY
AVESVVRASMASTSSSSISREDSRIRREDSRIRVSERDLFKGVTENPPMLLSHAASEMKS
RNNHFYSSSSSEESVIANNSPLLPFKTRLSSYSSLSSQSTSSEIISGEVPSSASTSSEDD
YYVVQFKKLDVYEQEQAVISLRKSTRTDEEARVSLCTPRLLSALKPLLVSRYAGVQPNAV
AALVNLSLAEINKVKIVRAGITSLLIDLLKGGSEETKEHAAGAIFSLALEDDNKTAIGVL
GALQPLLHALRSGTERTRHDSALALYHLTLVQSNRVKLVKLGAANTLLGLLKASDIAGKV
MLVVCNLAVCQEGKSALLDANAVDVLLGILRNWNKLDESTRENSVAALYSLSQGSLRFKS
MAKEAKAGEVLQVVVERGSGRAREKAKKMLIAMQRRVKEYDDEEEDANWEGILEG*

Transcript Sequence

Transcript ID

PGSC0003DMT400062863
Transcript Infomation

pacid=37462114 locus=PGSC0003DMG400024471 ID=PGSC0003DMT400062863.v4.03 annot-version=v4.03
Sequence

ATGTATTCCCCTTTCAGAAAAGCTAATGGGGAAACAGGTAGACATGGCAGAAGCAAATCC
GTGTGGAATATCTTTGTTTACAGGCCATCTTCTTCTAAATTTGATAAAAGGGATCCTCCA
AAAGAACTCATCTGCCCCATTTATGGGTGCTTGATGTTTGATCCAGTTGTGGTGTCTACT
GGCCAGAGTTTTGAGCGGACTTCTGTTCAAGTTTGTAAGGATTTGGAGTTTAAACCCCAA
CTTCAAAACGGGTTAAACCCGGATTTCACTAACGTGATACCGAATTTAGCTCTGAGGACG
ACAATTCTCACCTGGTGTGAAAAGTCAGGGGCGGAGAAGCCGCAGCAGCCGGATTATTAC
GCTGTTGAGTCTGTTGTTCGTGCTTCGATGGCTTCGACTTCTTCTTCTTCGATCTCTAGA
GAGGATTCTAGAATACGGAGAGAAGATTCTAGAATACGGGTGTCAGAGAGGGATTTGTTC
AAGGGGGTAACGGAGAATCCACCTATGCTTCTCTCTCACGCCGCATCGGAAATGAAATCG
AGGAATAATCATTTCTACTCTTCTTCGAGCTCTGAAGAATCTGTCATCGCTAACAACTCG
CCGCTACTCCCTTTTAAGACTCGTCTCTCCAGCTACTCCTCTTTGTCGTCGCAATCGACT
TCGTCGGAGATAATCTCCGGTGAAGTCCCGTCGTCTGCTTCCACGTCATCGGAAGATGAT
TATTACGTTGTTCAATTTAAGAAATTGGACGTTTATGAACAGGAACAAGCTGTAATTTCA
CTGAGAAAAAGTACCAGAACCGATGAAGAAGCTAGGGTTTCACTGTGCACGCCGCGGCTT
TTATCGGCTCTCAAGCCGTTACTAGTCTCGAGGTACGCCGGAGTTCAGCCGAACGCCGTC
GCCGCATTGGTCAACCTCTCGTTGGCAGAAATCAACAAAGTGAAAATCGTTCGAGCCGGA
ATTACCTCTCTGCTAATTGATCTTCTCAAAGGCGGCTCGGAGGAGACCAAAGAGCACGCA
GCCGGCGCCATATTCAGCTTAGCGCTGGAAGATGACAACAAGACAGCAATTGGAGTATTA
GGCGCATTGCAGCCGCTTTTACATGCTCTGAGGTCCGGGACAGAGCGGACTCGTCACGAC
TCCGCATTAGCCCTTTATCATTTGACCTTAGTGCAGAGTAACCGAGTTAAGCTCGTTAAA
CTCGGAGCTGCAAATACACTCCTGGGATTGCTCAAAGCCAGCGATATAGCGGGTAAAGTA
ATGCTGGTTGTGTGCAATTTGGCAGTGTGTCAAGAGGGGAAATCAGCATTGCTGGACGCC
AATGCAGTGGATGTACTGTTGGGGATACTGAGAAATTGGAATAAATTGGATGAGTCAACT
CGGGAGAATTCCGTGGCGGCTCTATACTCACTGAGTCAGGGGAGTTTGAGGTTCAAGAGT
ATGGCGAAAGAGGCGAAGGCGGGTGAAGTATTGCAAGTGGTGGTGGAGCGAGGAAGCGGA
CGGGCGAGGGAGAAGGCAAAGAAGATGTTGATCGCTATGCAAAGAAGGGTAAAGGAGTAT
GACGATGAAGAAGAGGATGCAAACTGGGAAGGAATACTTGAAGGATGA