Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062853
CDS Infomation

pacid=37461912 polypeptide=PGSC0003DMP400042300 locus=PGSC0003DMG400024467 ID=PGSC0003DMT400062853.v4.03 annot-version=v4.03
Sequence

ATGGTTTCCGATTCAATCCCCAAAGTTTCGATCCCTATTGCTTCCTCTAACCCCAAAGAT
TTTGCCAAGAAAAAAAGGGCTAATCGGTCGGCGAAGTTGAAGCAGTCCAAGCTTGATGCT
CGACGCGAGCAGTACCTTTCACAAGTGAAGAACAAAGGTTTGAAGGAGGAACCAAACACT
GGAGGAACTCATGGTTCAGCGAAGAATGTTGCGAATGAGAGGGAACGATTGATTGAGAAG
TTGCAGATAAAGCCAATAGGTGAAGAGGACAATGAAGGGTCCTTAAACCACTACAGTGAT
TTTGATTCACCTACAAGCCACACCAGTAGTGTTTTGGGAGGAAATGATTCAGGGACTAAT
TTCACAGGAAGCAGTAGAGGCAGTAGTAGCAGCAGTAGCAGTGGTGGATGTTGTTCAGGG
AGTGTGAGCGAGGAAGATGAAGAAGCAGAGGATGATTGCTTGGATGATTGGGAGGCTGTT
GCCGATGCTCTGGCTGCCACTGATAAAAAACAGGAGCAGCAAAATCCCAGCTTGGATTCA
CATTTTGAGAGGAATGAGAATATGGCACATATGAGTTCTAGGCAAGAGGTTTCTGAAAGG
CAGGGTTCAGGGATTGATAGATCAAAGCAGGAGTGTAATGACAGAGGATTGACACCTAGA
CCTCCTCTCAGTTGCCAGGCATGGAGACCCGATGATACATTCCGTCCGTCGGGTCTGCCA
AATTTGTCGAAGCAGCATAGTTTCCCAATGAATTCTGAGCGGCATTGTAGGAGGGACTCT
GTATGGGGATGTAAAACTTTAGCCACACCCACATTGTGTCCTATATGCTGTGAAGATTTG
GATTATACAGACACGAGTTTTCTCCCTTGTTCGTGCGGATTCAGGCTTTGCCTCTTTTGT
CACAAGAAGATTCTCGAGGAAGATGGGCGTTGTCCAGGGTGCAGGAAACAGTATAACCAG
GAGGCAGTTGAGCGAGAGGCAACCATTGATGGAGGCAGACTGACGATTCGATTGGCTCGT
TCCTGTAGCATGATATCAAGGTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042300
PEP Infomation

pacid=37461912 transcript=PGSC0003DMT400062853 locus=PGSC0003DMG400024467 ID=PGSC0003DMT400062853.v4.03 annot-version=v4.03
Sequence

MVSDSIPKVSIPIASSNPKDFAKKKRANRSAKLKQSKLDARREQYLSQVKNKGLKEEPNT
GGTHGSAKNVANERERLIEKLQIKPIGEEDNEGSLNHYSDFDSPTSHTSSVLGGNDSGTN
FTGSSRGSSSSSSSGGCCSGSVSEEDEEAEDDCLDDWEAVADALAATDKKQEQQNPSLDS
HFERNENMAHMSSRQEVSERQGSGIDRSKQECNDRGLTPRPPLSCQAWRPDDTFRPSGLP
NLSKQHSFPMNSERHCRRDSVWGCKTLATPTLCPICCEDLDYTDTSFLPCSCGFRLCLFC
HKKILEEDGRCPGCRKQYNQEAVEREATIDGGRLTIRLARSCSMISRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062853
Transcript Infomation

pacid=37461912 locus=PGSC0003DMG400024467 ID=PGSC0003DMT400062853.v4.03 annot-version=v4.03
Sequence

ATGGTTTCCGATTCAATCCCCAAAGTTTCGATCCCTATTGCTTCCTCTAACCCCAAAGAT
TTTGCCAAGAAAAAAAGGGCTAATCGGTCGGCGAAGTTGAAGCAGTCCAAGCTTGATGCT
CGACGCGAGCAGTACCTTTCACAAGTGAAGAACAAAGGTTTGAAGGAGGAACCAAACACT
GGAGGAACTCATGGTTCAGCGAAGAATGTTGCGAATGAGAGGGAACGATTGATTGAGAAG
TTGCAGATAAAGCCAATAGGTGAAGAGGACAATGAAGGGTCCTTAAACCACTACAGTGAT
TTTGATTCACCTACAAGCCACACCAGTAGTGTTTTGGGAGGAAATGATTCAGGGACTAAT
TTCACAGGAAGCAGTAGAGGCAGTAGTAGCAGCAGTAGCAGTGGTGGATGTTGTTCAGGG
AGTGTGAGCGAGGAAGATGAAGAAGCAGAGGATGATTGCTTGGATGATTGGGAGGCTGTT
GCCGATGCTCTGGCTGCCACTGATAAAAAACAGGAGCAGCAAAATCCCAGCTTGGATTCA
CATTTTGAGAGGAATGAGAATATGGCACATATGAGTTCTAGGCAAGAGGTTTCTGAAAGG
CAGGGTTCAGGGATTGATAGATCAAAGCAGGAGTGTAATGACAGAGGATTGACACCTAGA
CCTCCTCTCAGTTGCCAGGCATGGAGACCCGATGATACATTCCGTCCGTCGGGTCTGCCA
AATTTGTCGAAGCAGCATAGTTTCCCAATGAATTCTGAGCGGCATTGTAGGAGGGACTCT
GTATGGGGATGTAAAACTTTAGCCACACCCACATTGTGTCCTATATGCTGTGAAGATTTG
GATTATACAGACACGAGTTTTCTCCCTTGTTCGTGCGGATTCAGGCTTTGCCTCTTTTGT
CACAAGAAGATTCTCGAGGAAGATGGGCGTTGTCCAGGGTGCAGGAAACAGTATAACCAG
GAGGCAGTTGAGCGAGAGGCAACCATTGATGGAGGCAGACTGACGATTCGATTGGCTCGT
TCCTGTAGCATGATATCAAGGTCCTAG