Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062852
CDS Infomation

pacid=37461357 polypeptide=PGSC0003DMP400042299 locus=PGSC0003DMG400024466 ID=PGSC0003DMT400062852.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCCATGTACAACTTACCATCCAAGTCCTGGTAGCCCTGAAAATGACTCAATG
ATACTTTTCTCAACTTCAACTTCATGTTCACCAACCAAAGAATCCACAATAACTCACTCT
AATTCTTCTTCCTTCAATTCTTCATCACCACCACCACGACAATCGTCTCCAGATAAAACT
TATGAACTAAGAATTCGAAATCTTTCATATACTATTTCCCCAAATGGCTCAATATTTTCT
TCATTATTAATGAAGAAGAGTACTAAGCCAAAAACCACCATACTCAAATCAGTTTCTTTT
GTGGCTGGATGTTCGGAGATTCTAGCGATTGTTGGACCAAGTGGAACGGGCAAGTCAACG
TTGTTACGTGTGATATCAGGCAGGGTGAGTGACAAAGAGTTTGATCCAAAGAGTGTTTAT
CTCAATGATCATGCAATTACTACCCCTGTACAATTGAGGAACATATGTGGTTATGTAGCT
CAAGAGGACAATTTACTTCCTTTGTTAACAGTGAAGGAAACTTTAATGTTTAGCGCGAAG
TTTAGGCTAAGAGGGATGAGTTCAAAGGAGCGCGAAGAAAGAGTTGAAAGCTTGATGCAA
GAACTTGGCCTTGATCATGTAGCTAACAACTTCGTTGGAGACGAAGAGAACAGAGGAATT
TCAGGTGGCGAAAGAAAAAGGGTGTCGATTGGAGTTGACATGATACATGATCCACCAATA
TTACTGTTAGATGAGCCAACTTCAGGACTAGACAGCAGTTCAGCACTTCAAGTTATTGAA
TTGCTTTCGTCTATGGCGAAAACAAAACAAAGAACTATAGTTTTATCTATCCATCAGCCT
AGTTATAGAATTCTTCAGTACATTTCTAATCTTTTGATCCTTTCTCATGGATCAGTTGTT
CACTATGGTTCTCTTCAATCGCTTGAGGAAAATATAAGTAGGATGGGATATGAAATACCT
ATTCAGCTCAACCCTCTTGAATTTGCCATGGAAATTATATCCGTATTGGAAAATCAAGAA
CCACATTTTAAGTATCAGTCATGTTCCTATTTGAGATGGGAAGAGGCCATAATTCAAGGC
ACCGCGAATAAAGAAGTAATCGATCAGGGAAAAATTGGTGCTGTTTCGAATAAACACTGC
TCAAGTTTATTCGAAATAGCAGTGTTATGTTCAAGATTCTGGAAGATTATTTACAGGACA
AAGCAACTGTTCTTGGCGAGAACGATGCAAGCTCTTGTGGGAGGATTTGGACTTGGAAGT
GTGTATATAAAAATGAGGAATGATGAAGGTGCAGTTGCAGAAAGATTAGGCCTTTTTGCA
TTTAGCCTTAGTTTTCTTCTTTCATCCACTGTTGAAGCTTTACCAATTTATCTTCAAGAA
AGGCGCGTGATCATGAAGGAAGCGTCTAGAGGAGCTTATAAAATCTCTTCTTACATGATC
GCAAACACTATAATCTTTCTCCCATTTCTCTTTGCAGTGGCCATTCTTTTCGCTGTCCCA
GTGTACTGGATCGTAGGGCTGAACCCCTCGATTACAGCTTTCGTGTTCTTCACTTTCGTG
GTTTGGGTGATAGTGTTGATGGCAAGCTCATTGGTTCTGTTTCTGAGTGCAATTTCCCCT
GATTTCATTTCAGGGAATTCACTGATTTGCACTGTTCTTGGGGCTTTTTTTCTATTCTCA
GGCTACTTCATTCCAAAAGAATGCATACCAAAATATTGGCTTTTCATGTACTATGTTTCA
TTATATAGGTACCCATTGGACGCTATGTTGACAAATGAATACTGGAGTTTGAGACACAAA
TGTTTTACTTGGAATGATGAAAATCAGTCAGAATGTTTGCTTACAGGAAATGATGTATTG
AAGAATAGGGGACTTGACAAGGATACCAGGTGGATGAATGTTGGAATTATGCTTGCTTTC
TTTGTGTTTTATAGGGTGATTTGTTGGCTTGTTCTTGCAAGAAAAGCGTCAAAGACAACA
ATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042299
PEP Infomation

pacid=37461357 transcript=PGSC0003DMT400062852 locus=PGSC0003DMG400024466 ID=PGSC0003DMT400062852.v4.03 annot-version=v4.03
Sequence

MASPCTTYHPSPGSPENDSMILFSTSTSCSPTKESTITHSNSSSFNSSSPPPRQSSPDKT
YELRIRNLSYTISPNGSIFSSLLMKKSTKPKTTILKSVSFVAGCSEILAIVGPSGTGKST
LLRVISGRVSDKEFDPKSVYLNDHAITTPVQLRNICGYVAQEDNLLPLLTVKETLMFSAK
FRLRGMSSKEREERVESLMQELGLDHVANNFVGDEENRGISGGERKRVSIGVDMIHDPPI
LLLDEPTSGLDSSSALQVIELLSSMAKTKQRTIVLSIHQPSYRILQYISNLLILSHGSVV
HYGSLQSLEENISRMGYEIPIQLNPLEFAMEIISVLENQEPHFKYQSCSYLRWEEAIIQG
TANKEVIDQGKIGAVSNKHCSSLFEIAVLCSRFWKIIYRTKQLFLARTMQALVGGFGLGS
VYIKMRNDEGAVAERLGLFAFSLSFLLSSTVEALPIYLQERRVIMKEASRGAYKISSYMI
ANTIIFLPFLFAVAILFAVPVYWIVGLNPSITAFVFFTFVVWVIVLMASSLVLFLSAISP
DFISGNSLICTVLGAFFLFSGYFIPKECIPKYWLFMYYVSLYRYPLDAMLTNEYWSLRHK
CFTWNDENQSECLLTGNDVLKNRGLDKDTRWMNVGIMLAFFVFYRVICWLVLARKASKTT
I*

Transcript Sequence

Transcript ID

PGSC0003DMT400062852
Transcript Infomation

pacid=37461357 locus=PGSC0003DMG400024466 ID=PGSC0003DMT400062852.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCCATGTACAACTTACCATCCAAGTCCTGGTAGCCCTGAAAATGACTCAATG
ATACTTTTCTCAACTTCAACTTCATGTTCACCAACCAAAGAATCCACAATAACTCACTCT
AATTCTTCTTCCTTCAATTCTTCATCACCACCACCACGACAATCGTCTCCAGATAAAACT
TATGAACTAAGAATTCGAAATCTTTCATATACTATTTCCCCAAATGGCTCAATATTTTCT
TCATTATTAATGAAGAAGAGTACTAAGCCAAAAACCACCATACTCAAATCAGTTTCTTTT
GTGGCTGGATGTTCGGAGATTCTAGCGATTGTTGGACCAAGTGGAACGGGCAAGTCAACG
TTGTTACGTGTGATATCAGGCAGGGTGAGTGACAAAGAGTTTGATCCAAAGAGTGTTTAT
CTCAATGATCATGCAATTACTACCCCTGTACAATTGAGGAACATATGTGGTTATGTAGCT
CAAGAGGACAATTTACTTCCTTTGTTAACAGTGAAGGAAACTTTAATGTTTAGCGCGAAG
TTTAGGCTAAGAGGGATGAGTTCAAAGGAGCGCGAAGAAAGAGTTGAAAGCTTGATGCAA
GAACTTGGCCTTGATCATGTAGCTAACAACTTCGTTGGAGACGAAGAGAACAGAGGAATT
TCAGGTGGCGAAAGAAAAAGGGTGTCGATTGGAGTTGACATGATACATGATCCACCAATA
TTACTGTTAGATGAGCCAACTTCAGGACTAGACAGCAGTTCAGCACTTCAAGTTATTGAA
TTGCTTTCGTCTATGGCGAAAACAAAACAAAGAACTATAGTTTTATCTATCCATCAGCCT
AGTTATAGAATTCTTCAGTACATTTCTAATCTTTTGATCCTTTCTCATGGATCAGTTGTT
CACTATGGTTCTCTTCAATCGCTTGAGGAAAATATAAGTAGGATGGGATATGAAATACCT
ATTCAGCTCAACCCTCTTGAATTTGCCATGGAAATTATATCCGTATTGGAAAATCAAGAA
CCACATTTTAAGTATCAGTCATGTTCCTATTTGAGATGGGAAGAGGCCATAATTCAAGGC
ACCGCGAATAAAGAAGTAATCGATCAGGGAAAAATTGGTGCTGTTTCGAATAAACACTGC
TCAAGTTTATTCGAAATAGCAGTGTTATGTTCAAGATTCTGGAAGATTATTTACAGGACA
AAGCAACTGTTCTTGGCGAGAACGATGCAAGCTCTTGTGGGAGGATTTGGACTTGGAAGT
GTGTATATAAAAATGAGGAATGATGAAGGTGCAGTTGCAGAAAGATTAGGCCTTTTTGCA
TTTAGCCTTAGTTTTCTTCTTTCATCCACTGTTGAAGCTTTACCAATTTATCTTCAAGAA
AGGCGCGTGATCATGAAGGAAGCGTCTAGAGGAGCTTATAAAATCTCTTCTTACATGATC
GCAAACACTATAATCTTTCTCCCATTTCTCTTTGCAGTGGCCATTCTTTTCGCTGTCCCA
GTGTACTGGATCGTAGGGCTGAACCCCTCGATTACAGCTTTCGTGTTCTTCACTTTCGTG
GTTTGGGTGATAGTGTTGATGGCAAGCTCATTGGTTCTGTTTCTGAGTGCAATTTCCCCT
GATTTCATTTCAGGGAATTCACTGATTTGCACTGTTCTTGGGGCTTTTTTTCTATTCTCA
GGCTACTTCATTCCAAAAGAATGCATACCAAAATATTGGCTTTTCATGTACTATGTTTCA
TTATATAGGTACCCATTGGACGCTATGTTGACAAATGAATACTGGAGTTTGAGACACAAA
TGTTTTACTTGGAATGATGAAAATCAGTCAGAATGTTTGCTTACAGGAAATGATGTATTG
AAGAATAGGGGACTTGACAAGGATACCAGGTGGATGAATGTTGGAATTATGCTTGCTTTC
TTTGTGTTTTATAGGGTGATTTGTTGGCTTGTTCTTGCAAGAAAAGCGTCAAAGACAACA
ATTTGA