Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062850
CDS Infomation

pacid=37460217 polypeptide=PGSC0003DMP400042297 locus=PGSC0003DMG400024465 ID=PGSC0003DMT400062850.v4.03 annot-version=v4.03
Sequence

ATGGACACCGATGAGAGACTGACGGCTTTGAAAAGGGCTTATGCGGATATAATTTTGAAT
ACGGCGAAGGAAGCGGCGGCGAGGATTATGTCGTCCGAACAGAAGGCTGTTCGTTATAAG
CATGAACTTCAAGTGGCGAAAGAGGAGGGGCTTGGGATGCTTTTGCGTCTCAAACAGATG
ATGGATTCAAAGATTAGTGAAGCAGAGTTGACGTCCTTGAGTCAACAGAGAAAGATTGAA
GAACTTGAAGCTCAACTTCAGGAAGCGGAAGATATTGTGAGTGATCTCAGAGTAGAGCTG
AGGGAAGTTCAGGCTGATCTTGAGAGGGTGACAAGCTGCAAAGAGAAAGGAGTACGTAAC
TTAGAGGATATTGACACTGCTCCTCCTGGAAAACTACATGAAGAGAACAGAGTTGTGTTA
CCTCATGAATCACAGGAGTCGTCTATGACAATTTCTAACATAGAAGTTACGAATATGAAG
CAGAAAAATCAGGGCCATCAGTCATGTAGCAAAATGGTTCAGCTTGGAAAACCTAGCATT
TCAGGTCCAGATTTACCCTCTATAATTTTGAGAAGTAAAGTGCCAGAGCTATACAGAAAT
GGGTGTACACAGAGAATTCGTGCTTGTGAAGGGAACCTTTTAGATGGAGATTTATCTGTT
TCTAAAGGAGTTGAAAAAACTAAAAATGAAAATGGTAATGCAGTAGATGAAGGTGAAGGG
ATCTATTCATCACCTATTAATAAGATTGATGATGTGGTTAATCCACAGGAAAATATTCAA
CAAGCAGATGACTTGCTTAGCAGCTGGCACCTGCTAACATCTTTTCGCCGAAAAAGAAGA
AGAGCTATGAGAAATAGAAAAGCTGGTTATCCTTCACCAGGAAGCAGTCCTGACCATTTC
CTGAATATTGATAAAACGTCGAACACTGGTAGCTTGACTGCTCACTCCAGCCTTGCTAGT
GATGGTGCTCCTGATGAAGATCCTTCTCATATGGGCTATGGTTTGTCAATAGGAAAAGAT
GAACCAGATATGAAGCTGGGATTCACTGAAATGCACGGAAATGAATCACAGATTTCAAAA
TCTTCTCGCCGAAAAAGAAGAAGAGCTATGAGAAATAGGAAAGCCGATTATCCTTCTCCA
AGAAGCAGTCCTGATCATTTCCTTAATATTGATAAAACATCAAATGCTGGTGTCTTGATA
GCTCACTCCAGCCCTGATAGAGATTGTGATCCTGGTGAAGATCCTTCTCAGATGAGTGAC
AGCTTGCTGATAGAAAAAACTGAACCAGGCATGAAGCTGGGGTTCACTGAAATTTCCGGA
AATGAACCGCAGTCTGCTGAAACTTCTAGTGTTCTAAATTCAACAGTCAGTGATGAGTTA
GTGATGGCAAAAATGGACTCCCCCAGACAAGAAAGTAGATCCTTGGAGAACTTAGCGGTT
CATATCGACAGACCTGATTTTGTAACTGTTAGCAGTCAGCCAGGGAACTCATTGTCAAAG
ATAGCTGATGTATATGGTGAAGTTCCTAGCCAAACTCCGAAAGATAGAGTCATCAAATAC
ACTTTTCAAAGAAAGAGGAAGAGAGAGCAGTTGAGTGTATCAGAAGAGAATGCTCCAATT
GAGAAGAGCTCTCCAAAGGAATTAAATGGAGAAAAACTAAATGGTCATGTAGAGCCAAAA
ATGTCAAATTCAGCGACAGAATCATCACGGGACAGTCGCCGAATGGCACAGGTTGCACGA
CAGCTAATATCTTTGTCTGAGAAGAAGTGGTGGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042297
PEP Infomation

pacid=37460217 transcript=PGSC0003DMT400062850 locus=PGSC0003DMG400024465 ID=PGSC0003DMT400062850.v4.03 annot-version=v4.03
Sequence

MDTDERLTALKRAYADIILNTAKEAAARIMSSEQKAVRYKHELQVAKEEGLGMLLRLKQM
MDSKISEAELTSLSQQRKIEELEAQLQEAEDIVSDLRVELREVQADLERVTSCKEKGVRN
LEDIDTAPPGKLHEENRVVLPHESQESSMTISNIEVTNMKQKNQGHQSCSKMVQLGKPSI
SGPDLPSIILRSKVPELYRNGCTQRIRACEGNLLDGDLSVSKGVEKTKNENGNAVDEGEG
IYSSPINKIDDVVNPQENIQQADDLLSSWHLLTSFRRKRRRAMRNRKAGYPSPGSSPDHF
LNIDKTSNTGSLTAHSSLASDGAPDEDPSHMGYGLSIGKDEPDMKLGFTEMHGNESQISK
SSRRKRRRAMRNRKADYPSPRSSPDHFLNIDKTSNAGVLIAHSSPDRDCDPGEDPSQMSD
SLLIEKTEPGMKLGFTEISGNEPQSAETSSVLNSTVSDELVMAKMDSPRQESRSLENLAV
HIDRPDFVTVSSQPGNSLSKIADVYGEVPSQTPKDRVIKYTFQRKRKREQLSVSEENAPI
EKSSPKELNGEKLNGHVEPKMSNSATESSRDSRRMAQVARQLISLSEKKWWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400062850
Transcript Infomation

pacid=37460217 locus=PGSC0003DMG400024465 ID=PGSC0003DMT400062850.v4.03 annot-version=v4.03
Sequence

ATGGACACCGATGAGAGACTGACGGCTTTGAAAAGGGCTTATGCGGATATAATTTTGAAT
ACGGCGAAGGAAGCGGCGGCGAGGATTATGTCGTCCGAACAGAAGGCTGTTCGTTATAAG
CATGAACTTCAAGTGGCGAAAGAGGAGGGGCTTGGGATGCTTTTGCGTCTCAAACAGATG
ATGGATTCAAAGATTAGTGAAGCAGAGTTGACGTCCTTGAGTCAACAGAGAAAGATTGAA
GAACTTGAAGCTCAACTTCAGGAAGCGGAAGATATTGTGAGTGATCTCAGAGTAGAGCTG
AGGGAAGTTCAGGCTGATCTTGAGAGGGTGACAAGCTGCAAAGAGAAAGGAGTACGTAAC
TTAGAGGATATTGACACTGCTCCTCCTGGAAAACTACATGAAGAGAACAGAGTTGTGTTA
CCTCATGAATCACAGGAGTCGTCTATGACAATTTCTAACATAGAAGTTACGAATATGAAG
CAGAAAAATCAGGGCCATCAGTCATGTAGCAAAATGGTTCAGCTTGGAAAACCTAGCATT
TCAGGTCCAGATTTACCCTCTATAATTTTGAGAAGTAAAGTGCCAGAGCTATACAGAAAT
GGGTGTACACAGAGAATTCGTGCTTGTGAAGGGAACCTTTTAGATGGAGATTTATCTGTT
TCTAAAGGAGTTGAAAAAACTAAAAATGAAAATGGTAATGCAGTAGATGAAGGTGAAGGG
ATCTATTCATCACCTATTAATAAGATTGATGATGTGGTTAATCCACAGGAAAATATTCAA
CAAGCAGATGACTTGCTTAGCAGCTGGCACCTGCTAACATCTTTTCGCCGAAAAAGAAGA
AGAGCTATGAGAAATAGAAAAGCTGGTTATCCTTCACCAGGAAGCAGTCCTGACCATTTC
CTGAATATTGATAAAACGTCGAACACTGGTAGCTTGACTGCTCACTCCAGCCTTGCTAGT
GATGGTGCTCCTGATGAAGATCCTTCTCATATGGGCTATGGTTTGTCAATAGGAAAAGAT
GAACCAGATATGAAGCTGGGATTCACTGAAATGCACGGAAATGAATCACAGATTTCAAAA
TCTTCTCGCCGAAAAAGAAGAAGAGCTATGAGAAATAGGAAAGCCGATTATCCTTCTCCA
AGAAGCAGTCCTGATCATTTCCTTAATATTGATAAAACATCAAATGCTGGTGTCTTGATA
GCTCACTCCAGCCCTGATAGAGATTGTGATCCTGGTGAAGATCCTTCTCAGATGAGTGAC
AGCTTGCTGATAGAAAAAACTGAACCAGGCATGAAGCTGGGGTTCACTGAAATTTCCGGA
AATGAACCGCAGTCTGCTGAAACTTCTAGTGTTCTAAATTCAACAGTCAGTGATGAGTTA
GTGATGGCAAAAATGGACTCCCCCAGACAAGAAAGTAGATCCTTGGAGAACTTAGCGGTT
CATATCGACAGACCTGATTTTGTAACTGTTAGCAGTCAGCCAGGGAACTCATTGTCAAAG
ATAGCTGATGTATATGGTGAAGTTCCTAGCCAAACTCCGAAAGATAGAGTCATCAAATAC
ACTTTTCAAAGAAAGAGGAAGAGAGAGCAGTTGAGTGTATCAGAAGAGAATGCTCCAATT
GAGAAGAGCTCTCCAAAGGAATTAAATGGAGAAAAACTAAATGGTCATGTAGAGCCAAAA
ATGTCAAATTCAGCGACAGAATCATCACGGGACAGTCGCCGAATGGCACAGGTTGCACGA
CAGCTAATATCTTTGTCTGAGAAGAAGTGGTGGAAGTGA