Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062841
CDS Infomation

pacid=37459452 polypeptide=PGSC0003DMP400042288 locus=PGSC0003DMG400024462 ID=PGSC0003DMT400062841.v4.03 annot-version=v4.03
Sequence

ATGGATCCCACTCTCAAAAAGCAACCTAAACCTACCCCTTTCTCCGCCACCACAAACTCC
AAGCCCCACCCCCCACCAGATCCCACCCCAACTATCCAAAACATCTCTTCTCACTTCTCC
AAGCTTTATGCAAATCACAAAATCCTCAAATCTGGCCATAGACATCCACCTCCTGTTGAC
ACTCATTTACAGGCTAAAACTCTGGCTGTTGCTTCCTCTGCTTTTGATTCTTCATGCTCT
GCTTTGACCAAGTCAAAAAGCCAACATGGGAGGAGATATGTGCAGAAGGATGTTGATAAA
GCTATTGTCTTGCAAGAAAAAGGTGAAATCAAGAAAATACCCAATAAGGAGAAGGAGTTG
AAGAAAGAGGTGGATGTGAAAAGGGCATTAGCTCTGTTATCCAAGGACCAAGATAGTGAA
CAGTTGAAGGGGTTTCAACAAAGGCCATCTTTTTCCTTGTCTTTGAATGGTGGAGGCAGG
AGGAAATCATTCGGTTGCTCACAGACTGAGTTAGCTGATTTCTTTTCTTGTAGTGGTGTG
AAAGTTGTGTCTGTTGATATGCCACCCTTTATGCAGATTCATGCTGTGGATTTTGCAAGA
AAAGCTCATGATAGCTTGGAAAAGTTCTCCTCTAAATCACTTGGATTTTCCCTAAAAAAG
GAGTTTGATGGGGTCTATGGACCAGCATGGCACTGTATAGTAGGGACCAGTTTTGGCTCT
TTTGTCACACATTCAGTAGGTGGTTTCATATATTTCTCCATGGATCACAAGCTATATGTA
CTCCTTTTCAAGACTACTGTACAAAAAGCAGAATCAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042288
PEP Infomation

pacid=37459452 transcript=PGSC0003DMT400062841 locus=PGSC0003DMG400024462 ID=PGSC0003DMT400062841.v4.03 annot-version=v4.03
Sequence

MDPTLKKQPKPTPFSATTNSKPHPPPDPTPTIQNISSHFSKLYANHKILKSGHRHPPPVD
THLQAKTLAVASSAFDSSCSALTKSKSQHGRRYVQKDVDKAIVLQEKGEIKKIPNKEKEL
KKEVDVKRALALLSKDQDSEQLKGFQQRPSFSLSLNGGGRRKSFGCSQTELADFFSCSGV
KVVSVDMPPFMQIHAVDFARKAHDSLEKFSSKSLGFSLKKEFDGVYGPAWHCIVGTSFGS
FVTHSVGGFIYFSMDHKLYVLLFKTTVQKAESS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062841
Transcript Infomation

pacid=37459452 locus=PGSC0003DMG400024462 ID=PGSC0003DMT400062841.v4.03 annot-version=v4.03
Sequence

ATGGATCCCACTCTCAAAAAGCAACCTAAACCTACCCCTTTCTCCGCCACCACAAACTCC
AAGCCCCACCCCCCACCAGATCCCACCCCAACTATCCAAAACATCTCTTCTCACTTCTCC
AAGCTTTATGCAAATCACAAAATCCTCAAATCTGGCCATAGACATCCACCTCCTGTTGAC
ACTCATTTACAGGCTAAAACTCTGGCTGTTGCTTCCTCTGCTTTTGATTCTTCATGCTCT
GCTTTGACCAAGTCAAAAAGCCAACATGGGAGGAGATATGTGCAGAAGGATGTTGATAAA
GCTATTGTCTTGCAAGAAAAAGGTGAAATCAAGAAAATACCCAATAAGGAGAAGGAGTTG
AAGAAAGAGGTGGATGTGAAAAGGGCATTAGCTCTGTTATCCAAGGACCAAGATAGTGAA
CAGTTGAAGGGGTTTCAACAAAGGCCATCTTTTTCCTTGTCTTTGAATGGTGGAGGCAGG
AGGAAATCATTCGGTTGCTCACAGACTGAGTTAGCTGATTTCTTTTCTTGTAGTGGTGTG
AAAGTTGTGTCTGTTGATATGCCACCCTTTATGCAGATTCATGCTGTGGATTTTGCAAGA
AAAGCTCATGATAGCTTGGAAAAGTTCTCCTCTAAATCACTTGGATTTTCCCTAAAAAAG
GAGTTTGATGGGGTCTATGGACCAGCATGGCACTGTATAGTAGGGACCAGTTTTGGCTCT
TTTGTCACACATTCAGTAGGTGGTTTCATATATTTCTCCATGGATCACAAGCTATATGTA
CTCCTTTTCAAGACTACTGTACAAAAAGCAGAATCAAGTTGA