Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062832
CDS Infomation

pacid=37462716 polypeptide=PGSC0003DMP400042282 locus=PGSC0003DMG400024459 ID=PGSC0003DMT400062832.v4.03 annot-version=v4.03
Sequence

ATGGGAAGCAGTCATTTCTTCATCATCTTTCTGTTGAACTTTCTGTTGATTCTTTGTCCT
TCTGTTTCACTTCCTTTGTGTACTGATTCAAGGGCTCCTCTGCCTCAAAAGACTCCACTT
ACATTCTGTCCTTATAATGGAACATCATGCTGTAACTCTGGTGATGATAAGCAATTGAAG
AACCAATATGATGCTATGAACATTTCTGATTCTGGTTGTGCTTCTCTAGTGAAGTCTATC
CTTTGTGCGAAATGTGATCAGTTTTCAGCAGATCTCTTTAGTACTAGTTCTGCTCCTAGA
CAGATTCCAATACTGTGCAACTCCACAACTTCAGCAAATTTTACGCAATCTAGCCAAGCT
ACGAATAACTTTTGCTCTAAAGTTTGGACTACATGTCAAAATGTGTCCATCGTGAATTCT
CCCTTTGCTGCTTCCTTGAAAGGTCGAGCTCCAACACCTGTAAAGTCCAATTCCACCAAG
TTGACGGATCTCTGGCAATCACAAGACGATTTCTGTAATGCATTTGGAGGAGCTTCTGGT
GATGAATCAGTATGCTTTGCTGGAGAACCTGTTGCCTTAAATACCACTGAACCTTTAAGT
CCTCCAGGTGGTTTGTGCCTTGAGAAGATAGGAAATGGTAGTTATCTCGATATGGCTGCT
CATCCTGATGGTTCTAATCGTGCCTTTTTCTCGAATCAGCAAGGAAAAATATGGTTGGCT
ACCATTCCAGAAGTTGACTCTGGAAAGGTGTTAGAGCTTGATGAGTCCAATCCTTTTCTG
GATCTAACTGATGAAGTTCATTTTGACACTCAATTTGGTATGATGGGGATTGCATTTCAT
CCAAAGTTCTCACAAAATGGTCGTTTCTTTGCTTCGTTCAATTGCGATAAGCAATCATGG
GCTGGATGTGCAGGAAGATGCTCTTGTAACTCGGATGTGGATTGTGATCCATCAAAACTA
CCTAGTGATAGTGGTACCCGGCCATGCCAATATCAAACAGTTATAGCAGAATTTACTGTC
AATGGAACAGCAAACCAACCATCAGAGGCAAAATCTGCCAGCCCCATAGAAGTCAGAAGA
ATATTCACCATGGGCCTTCCTTTTACCTCTCATCATGGAGGCCAGATTCTTTTTGGACCT
AGCGATGGATATTTGTATTTCATGATGGGAGATGGTGGGGGTATTGGAGATCCTTACAAT
TTTTCCCAAAACAAGAAGTCGTTGCTTGGAAAGATTATGAGACTTGATGTCGATAGCACA
CCAAGTGCTGCAGAGATTACCAAGCTTGCTTTATGGGGAAACTACACCATTCCAAAGGAT
AATCCTTATATTGAAGATAAAGAGTTGCAGCCAGAAATATGGGCACTAGGAATGCGAAAT
CCTTGGCGCTGTAGTTTCGATTCTGCAAGGCCATCTTACTTCATGTGTGCAGATGTAGGC
CAGGATCATTATGAAGAGGTGGATTTAATCACCAAGGGAGGAAACTACGGTTGGCGTATG
TATGAGGGTGACAGACTATTCACTCCTTCAAAAAATACATCTATAAACCCAATTTTCCCA
GTCATGGGTTATAATCACTCTGATATAAATAAGGCTGAAGGTTCAGCCTCAATCACTGGT
GGATACTTCTATAGGTCCACGACCGATCCTTGCATGTCTGGAAAGTATCTGTATGCAGAT
TTATATGCAGGTGCTATGTGGGCAGGCACTGAAACCCCTGAGGACAGTGGAACATTTAAC
ACGACCGAAATTCCATTCACTTGTGCTGGAAATTCCCCTATAAACTGTGAATTAGTTCCA
GGAAGCACAGTTCCAGCTTTGGGATACATTTTCTCATATGGTGAGGATAATAATAAGGAT
GTATTTCTCCTAGCAAGCAGTGGTGTATACAGGGTTGTTCGTCCCAGTCGATGTAAATAC
ACTTGTTCTAAGGAAAATGCTACTGATATTGCTACTCCAGCAGCTCCTGGTACTTCCCCT
CCTTCAGCAGCAGTCATGTTTACAGGTTCATACAAGAATTTAGTACTACTACTATTGTCC
TTTTGGTTGATGGTCATCAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042282
PEP Infomation

pacid=37462716 transcript=PGSC0003DMT400062832 locus=PGSC0003DMG400024459 ID=PGSC0003DMT400062832.v4.03 annot-version=v4.03
Sequence

MGSSHFFIIFLLNFLLILCPSVSLPLCTDSRAPLPQKTPLTFCPYNGTSCCNSGDDKQLK
NQYDAMNISDSGCASLVKSILCAKCDQFSADLFSTSSAPRQIPILCNSTTSANFTQSSQA
TNNFCSKVWTTCQNVSIVNSPFAASLKGRAPTPVKSNSTKLTDLWQSQDDFCNAFGGASG
DESVCFAGEPVALNTTEPLSPPGGLCLEKIGNGSYLDMAAHPDGSNRAFFSNQQGKIWLA
TIPEVDSGKVLELDESNPFLDLTDEVHFDTQFGMMGIAFHPKFSQNGRFFASFNCDKQSW
AGCAGRCSCNSDVDCDPSKLPSDSGTRPCQYQTVIAEFTVNGTANQPSEAKSASPIEVRR
IFTMGLPFTSHHGGQILFGPSDGYLYFMMGDGGGIGDPYNFSQNKKSLLGKIMRLDVDST
PSAAEITKLALWGNYTIPKDNPYIEDKELQPEIWALGMRNPWRCSFDSARPSYFMCADVG
QDHYEEVDLITKGGNYGWRMYEGDRLFTPSKNTSINPIFPVMGYNHSDINKAEGSASITG
GYFYRSTTDPCMSGKYLYADLYAGAMWAGTETPEDSGTFNTTEIPFTCAGNSPINCELVP
GSTVPALGYIFSYGEDNNKDVFLLASSGVYRVVRPSRCKYTCSKENATDIATPAAPGTSP
PSAAVMFTGSYKNLVLLLLSFWLMVIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062832
Transcript Infomation

pacid=37462716 locus=PGSC0003DMG400024459 ID=PGSC0003DMT400062832.v4.03 annot-version=v4.03
Sequence

ATGGGAAGCAGTCATTTCTTCATCATCTTTCTGTTGAACTTTCTGTTGATTCTTTGTCCT
TCTGTTTCACTTCCTTTGTGTACTGATTCAAGGGCTCCTCTGCCTCAAAAGACTCCACTT
ACATTCTGTCCTTATAATGGAACATCATGCTGTAACTCTGGTGATGATAAGCAATTGAAG
AACCAATATGATGCTATGAACATTTCTGATTCTGGTTGTGCTTCTCTAGTGAAGTCTATC
CTTTGTGCGAAATGTGATCAGTTTTCAGCAGATCTCTTTAGTACTAGTTCTGCTCCTAGA
CAGATTCCAATACTGTGCAACTCCACAACTTCAGCAAATTTTACGCAATCTAGCCAAGCT
ACGAATAACTTTTGCTCTAAAGTTTGGACTACATGTCAAAATGTGTCCATCGTGAATTCT
CCCTTTGCTGCTTCCTTGAAAGGTCGAGCTCCAACACCTGTAAAGTCCAATTCCACCAAG
TTGACGGATCTCTGGCAATCACAAGACGATTTCTGTAATGCATTTGGAGGAGCTTCTGGT
GATGAATCAGTATGCTTTGCTGGAGAACCTGTTGCCTTAAATACCACTGAACCTTTAAGT
CCTCCAGGTGGTTTGTGCCTTGAGAAGATAGGAAATGGTAGTTATCTCGATATGGCTGCT
CATCCTGATGGTTCTAATCGTGCCTTTTTCTCGAATCAGCAAGGAAAAATATGGTTGGCT
ACCATTCCAGAAGTTGACTCTGGAAAGGTGTTAGAGCTTGATGAGTCCAATCCTTTTCTG
GATCTAACTGATGAAGTTCATTTTGACACTCAATTTGGTATGATGGGGATTGCATTTCAT
CCAAAGTTCTCACAAAATGGTCGTTTCTTTGCTTCGTTCAATTGCGATAAGCAATCATGG
GCTGGATGTGCAGGAAGATGCTCTTGTAACTCGGATGTGGATTGTGATCCATCAAAACTA
CCTAGTGATAGTGGTACCCGGCCATGCCAATATCAAACAGTTATAGCAGAATTTACTGTC
AATGGAACAGCAAACCAACCATCAGAGGCAAAATCTGCCAGCCCCATAGAAGTCAGAAGA
ATATTCACCATGGGCCTTCCTTTTACCTCTCATCATGGAGGCCAGATTCTTTTTGGACCT
AGCGATGGATATTTGTATTTCATGATGGGAGATGGTGGGGGTATTGGAGATCCTTACAAT
TTTTCCCAAAACAAGAAGTCGTTGCTTGGAAAGATTATGAGACTTGATGTCGATAGCACA
CCAAGTGCTGCAGAGATTACCAAGCTTGCTTTATGGGGAAACTACACCATTCCAAAGGAT
AATCCTTATATTGAAGATAAAGAGTTGCAGCCAGAAATATGGGCACTAGGAATGCGAAAT
CCTTGGCGCTGTAGTTTCGATTCTGCAAGGCCATCTTACTTCATGTGTGCAGATGTAGGC
CAGGATCATTATGAAGAGGTGGATTTAATCACCAAGGGAGGAAACTACGGTTGGCGTATG
TATGAGGGTGACAGACTATTCACTCCTTCAAAAAATACATCTATAAACCCAATTTTCCCA
GTCATGGGTTATAATCACTCTGATATAAATAAGGCTGAAGGTTCAGCCTCAATCACTGGT
GGATACTTCTATAGGTCCACGACCGATCCTTGCATGTCTGGAAAGTATCTGTATGCAGAT
TTATATGCAGGTGCTATGTGGGCAGGCACTGAAACCCCTGAGGACAGTGGAACATTTAAC
ACGACCGAAATTCCATTCACTTGTGCTGGAAATTCCCCTATAAACTGTGAATTAGTTCCA
GGAAGCACAGTTCCAGCTTTGGGATACATTTTCTCATATGGTGAGGATAATAATAAGGAT
GTATTTCTCCTAGCAAGCAGTGGTGTATACAGGGTTGTTCGTCCCAGTCGATGTAAATAC
ACTTGTTCTAAGGAAAATGCTACTGATATTGCTACTCCAGCAGCTCCTGGTACTTCCCCT
CCTTCAGCAGCAGTCATGTTTACAGGTTCATACAAGAATTTAGTACTACTACTATTGTCC
TTTTGGTTGATGGTCATCAGTTGA