Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062813
CDS Infomation

pacid=37454867 polypeptide=PGSC0003DMP400042274 locus=PGSC0003DMG400024449 ID=PGSC0003DMT400062813.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTCTACAGTACTTGGAATCGTTACGCAATGATCATCCAGAGCTTTCTGATTGG
TACACCACGCTTGCAGATCTGTACCAACGCAAGCTCTGGCATCAGCTCTCTCTCAAGCTC
GAACAGTTCGTTGCTCTCGCTGTTTTTCAGGCTGGTGACACGTTGATACAGCTATATCAC
AATTTCATCACTGATTTTGAGACAAAGATCAATCTTCTGAAGCTTGCACATTTCGCTGTA
ATCGTCTCTCGGCAATATTCGGAGAAAGATGCTGCAATAGGTTATCTGGAAGGAGTGGCA
GAGAAACTCCAAAATACTAAAGAGACACGGATAGAGGAGCCAATACTTTATATTAAGTTG
CAGATTGCCCTATTTAAGCTTGAACAAGGGGATCAAAAAGAGTGCAAGAAGCTTTTAGAA
CAGGGGAATGCTACACTTGACAGCATGACCGATGTTGACCCCTCTGTGTATGCCAGTTAC
TATTGGGTTTCATCTCAGTATCATAAAACACGGCAGGAGTTTGCAGAGTTTTACAAAAGT
GCCCTCCTCTATCTTGCATACATTTCAGTGGATTCTCTTTCGGAGTCATTCAAGCTGGAT
TTGGCATTTGATTTGTCCTTGTCAGCATTACTGGGAGACAACGTATACAATTTTGGGGAG
CTGCTTGCTCATCCTATAATAAAGAGTTTGGTAGGGACACAAGTCGAATGGCTATATCAT
ATCCTTGAAGCATTCAACACTGGTGATTTAGTTCGTTATCAGGAATTGTGCCGTGTCCAT
CAAGCTGCTTTAAGTGCTCAACCAGCATTGTTGCAGAACGAGAAAAAGCTTCTTGAGAAG
ATCAACATTCTATGCTTGATGGAAATCATCTTCAGTCGCCCAGCAGAGGATAGAACTATT
CCATTGAGTGCCATTGCAGAGCGCACTAAACTTAGCGTGGAAGATGTAGAGCATCTCTTA
ATGAAGAGTCTCTCTGTACATCTGATAGAGGGAATAATCGATCAAGTGGAAGGGACTGTT
CACGTGTCCTGGGTTCAACCAAGAGTTTTGGGTATTCCTCAGATCAAGTCATTGCGGGAT
CGGCTAGATAATTGGGTGGATAAAGTACACACTGCATTGTTATCCGTGGAAGCTGAAACT
CCTGATTTGGTTTCATCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042274
PEP Infomation

pacid=37454867 transcript=PGSC0003DMT400062813 locus=PGSC0003DMG400024449 ID=PGSC0003DMT400062813.v4.03 annot-version=v4.03
Sequence

MAALQYLESLRNDHPELSDWYTTLADLYQRKLWHQLSLKLEQFVALAVFQAGDTLIQLYH
NFITDFETKINLLKLAHFAVIVSRQYSEKDAAIGYLEGVAEKLQNTKETRIEEPILYIKL
QIALFKLEQGDQKECKKLLEQGNATLDSMTDVDPSVYASYYWVSSQYHKTRQEFAEFYKS
ALLYLAYISVDSLSESFKLDLAFDLSLSALLGDNVYNFGELLAHPIIKSLVGTQVEWLYH
ILEAFNTGDLVRYQELCRVHQAALSAQPALLQNEKKLLEKINILCLMEIIFSRPAEDRTI
PLSAIAERTKLSVEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRD
RLDNWVDKVHTALLSVEAETPDLVSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062813
Transcript Infomation

pacid=37454867 locus=PGSC0003DMG400024449 ID=PGSC0003DMT400062813.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTCTACAGTACTTGGAATCGTTACGCAATGATCATCCAGAGCTTTCTGATTGG
TACACCACGCTTGCAGATCTGTACCAACGCAAGCTCTGGCATCAGCTCTCTCTCAAGCTC
GAACAGTTCGTTGCTCTCGCTGTTTTTCAGGCTGGTGACACGTTGATACAGCTATATCAC
AATTTCATCACTGATTTTGAGACAAAGATCAATCTTCTGAAGCTTGCACATTTCGCTGTA
ATCGTCTCTCGGCAATATTCGGAGAAAGATGCTGCAATAGGTTATCTGGAAGGAGTGGCA
GAGAAACTCCAAAATACTAAAGAGACACGGATAGAGGAGCCAATACTTTATATTAAGTTG
CAGATTGCCCTATTTAAGCTTGAACAAGGGGATCAAAAAGAGTGCAAGAAGCTTTTAGAA
CAGGGGAATGCTACACTTGACAGCATGACCGATGTTGACCCCTCTGTGTATGCCAGTTAC
TATTGGGTTTCATCTCAGTATCATAAAACACGGCAGGAGTTTGCAGAGTTTTACAAAAGT
GCCCTCCTCTATCTTGCATACATTTCAGTGGATTCTCTTTCGGAGTCATTCAAGCTGGAT
TTGGCATTTGATTTGTCCTTGTCAGCATTACTGGGAGACAACGTATACAATTTTGGGGAG
CTGCTTGCTCATCCTATAATAAAGAGTTTGGTAGGGACACAAGTCGAATGGCTATATCAT
ATCCTTGAAGCATTCAACACTGGTGATTTAGTTCGTTATCAGGAATTGTGCCGTGTCCAT
CAAGCTGCTTTAAGTGCTCAACCAGCATTGTTGCAGAACGAGAAAAAGCTTCTTGAGAAG
ATCAACATTCTATGCTTGATGGAAATCATCTTCAGTCGCCCAGCAGAGGATAGAACTATT
CCATTGAGTGCCATTGCAGAGCGCACTAAACTTAGCGTGGAAGATGTAGAGCATCTCTTA
ATGAAGAGTCTCTCTGTACATCTGATAGAGGGAATAATCGATCAAGTGGAAGGGACTGTT
CACGTGTCCTGGGTTCAACCAAGAGTTTTGGGTATTCCTCAGATCAAGTCATTGCGGGAT
CGGCTAGATAATTGGGTGGATAAAGTACACACTGCATTGTTATCCGTGGAAGCTGAAACT
CCTGATTTGGTTTCATCGTAA