Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062758
CDS Infomation

pacid=37466902 polypeptide=PGSC0003DMP400042247 locus=PGSC0003DMG400024426 ID=PGSC0003DMT400062758.v4.03 annot-version=v4.03
Sequence

ATGTCTTCATCATCTAAGGATGATCAATCATCCAATACACCATCATCGGATTCTTCATCA
TCTTCTTCGAATTCTCCACCGTCTGGCTCATCCTCAAATTCTTCGCCATCCCAAGACAAT
TCATCTTCATCCAATGATTCAAAATCCCAATCTCCTCCTCAAAGTAATTCATCATCTTCT
CCGCCATCAGGGGATAATAATAACTCGTCTCCTTCCGGTGGTAACAACAACAATAATGAC
AATAACAACGACAACAAGGACAACAACAACAATAATGGTAACAACAACAACAACAATGAT
GGTAACAACAACAACAATGGTAACAATGATAACGACAACAATAACAATAAGAATGACAAT
AACAACAATAATGGTGGGAACAATAACAACAACAACAACAATGGTGGTAACAATAACAAT
AACAACAACAACAATGGTGGTAACAACAATAATGGTAACAAATCTTCACCACCAGGAAAA
TCGTCAAATTCAAATGGAGGTTCATCACCTCCTCCACCCCCACCACCACCACCTCCTCCA
CCACCTCCTCCTTCTCCTTTTTCTCCCAACTCCGGGTTTCTTTCTCCTCCAAAGCATAAG
CCACCACCAAGCAAGTCCTTAGATAATAATAATAACAACAAGCCTAATGATAACGGGACA
GCCATCATTGTAGGAGTTGCTGCTGCAGGAGGTCTATTACTTCTTGTCATGTTAGTTTTC
CTTATATCATGTTGTAAACGCAAAAGGAGAAGGCCACGCGACCAAATGGGCTACTACAGG
GACAATTCTCATGGAGGCAATAGTACTGACTACTATAACAGTGGACCATATGGGAATTGG
CACAACAACAACAATATTCAATCAACGGATCATATGGTGAAAATGCCTAATCCTCAAGCA
CCGAGTACTAACGTAAGTTCAGAACTGAGTTGGCCAATAGCACCTCCACCACCACCACCA
ATGATGAGTAGCAGTGAATTAAGCTCAGCTGCTTTCTCTGGTCCGCAACAACCTCCATTG
CCACCCCCACACCCATCAATGGCTCTTGGTTTTAACCAAAGTAGTTTTACATACGATGAC
TTATCTACCGCAACTGGAGGATTTGTTAAGTCTAATCTATTGGGACAAGGTGGTTTTGGC
TTTGTACATAAAGGGGTCTTGCCTAATGGTAAGGATATAGCTGTCAAAAGTCTAAAAGCT
AATAGTGGACAAGGTGAACGAGAATTTCAAGCTGAAGTTGAAATTATTAGTCGTGTACAT
CATCGACATCTTGTCTCTTTAGTCGGTTATTGCATTGCTGGATCTCAAAGGTTGTTGGTA
TATGAGTTTGTTCCTAATGGCACTCTTGAGTATCACCTTCATGGAACTGGTCGCCCTGTT
ATGGACTTCCCTACTAGGCTTAAAATTGCATTAGGATCTGCCAAAGGCTTCGCGTACCTT
CATGAAGATTGCCACCCTCGTATTATTCACAGAGACATTAAAGCTGCTAATATTTTACTG
GACCATAACTGTGAAGCTAAGGTTGCTGATTTTGGATTAGCTAAACTTTCCAACGACACT
AATACACATGTTTCTACGCGTATCATGGGCACTTTTGGGTACTTAGCACCAGAATACGCT
TCAAGTGGCAAGCTAACTGAAAAGTCTGACGTCTATTCTTATGGTGTTATGCTGTTGGAA
CTTATAACTGGGCGTCGTCCTATAGACATCAGCAGTGATGATGATACTTTAGTGGAATGG
GCTAGGCCAATTCTGATTCGTGCAACAGAGGGTGGAAACTACGATGAATTAATAGATCCA
CGTTTGGAAGGAAATTTTGATGCCCAAGAGATGCTATGTATGGTAGCTTGTGCTGCTGCA
TCCATCAGACATTCAGCAAGAAGACGTCCCAAAATGAGTCAGATTGTACGTGCTTTAGAA
GGTGATGTGTCTCTGGATGATTTAAATGAGGGAATGAAGAAGTCCCCGAGTACTGCAATG
TTTGGTTCTAGTGAAAGTTCTGAATACGATGGAGGTTCATATGACCTTAAGAAATTCAAG
AAATCTGGAATGTCGAGTCAAGAATTCACAAGCAGTGAACATGGTACCGGTGAATTTGTC
CATTCCGGTGGTGAATCTCAAGAACATGGGCAGAAAAGGCACACCCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042247
PEP Infomation

pacid=37466902 transcript=PGSC0003DMT400062758 locus=PGSC0003DMG400024426 ID=PGSC0003DMT400062758.v4.03 annot-version=v4.03
Sequence

MSSSSKDDQSSNTPSSDSSSSSSNSPPSGSSSNSSPSQDNSSSSNDSKSQSPPQSNSSSS
PPSGDNNNSSPSGGNNNNNDNNNDNKDNNNNNGNNNNNNDGNNNNNGNNDNDNNNNKNDN
NNNNGGNNNNNNNNGGNNNNNNNNNGGNNNNGNKSSPPGKSSNSNGGSSPPPPPPPPPPP
PPPPSPFSPNSGFLSPPKHKPPPSKSLDNNNNNKPNDNGTAIIVGVAAAGGLLLLVMLVF
LISCCKRKRRRPRDQMGYYRDNSHGGNSTDYYNSGPYGNWHNNNNIQSTDHMVKMPNPQA
PSTNVSSELSWPIAPPPPPPMMSSSELSSAAFSGPQQPPLPPPHPSMALGFNQSSFTYDD
LSTATGGFVKSNLLGQGGFGFVHKGVLPNGKDIAVKSLKANSGQGEREFQAEVEIISRVH
HRHLVSLVGYCIAGSQRLLVYEFVPNGTLEYHLHGTGRPVMDFPTRLKIALGSAKGFAYL
HEDCHPRIIHRDIKAANILLDHNCEAKVADFGLAKLSNDTNTHVSTRIMGTFGYLAPEYA
SSGKLTEKSDVYSYGVMLLELITGRRPIDISSDDDTLVEWARPILIRATEGGNYDELIDP
RLEGNFDAQEMLCMVACAAASIRHSARRRPKMSQIVRALEGDVSLDDLNEGMKKSPSTAM
FGSSESSEYDGGSYDLKKFKKSGMSSQEFTSSEHGTGEFVHSGGESQEHGQKRHTP*

Transcript Sequence

Transcript ID

PGSC0003DMT400062758
Transcript Infomation

pacid=37466902 locus=PGSC0003DMG400024426 ID=PGSC0003DMT400062758.v4.03 annot-version=v4.03
Sequence

ATGTCTTCATCATCTAAGGATGATCAATCATCCAATACACCATCATCGGATTCTTCATCA
TCTTCTTCGAATTCTCCACCGTCTGGCTCATCCTCAAATTCTTCGCCATCCCAAGACAAT
TCATCTTCATCCAATGATTCAAAATCCCAATCTCCTCCTCAAAGTAATTCATCATCTTCT
CCGCCATCAGGGGATAATAATAACTCGTCTCCTTCCGGTGGTAACAACAACAATAATGAC
AATAACAACGACAACAAGGACAACAACAACAATAATGGTAACAACAACAACAACAATGAT
GGTAACAACAACAACAATGGTAACAATGATAACGACAACAATAACAATAAGAATGACAAT
AACAACAATAATGGTGGGAACAATAACAACAACAACAACAATGGTGGTAACAATAACAAT
AACAACAACAACAATGGTGGTAACAACAATAATGGTAACAAATCTTCACCACCAGGAAAA
TCGTCAAATTCAAATGGAGGTTCATCACCTCCTCCACCCCCACCACCACCACCTCCTCCA
CCACCTCCTCCTTCTCCTTTTTCTCCCAACTCCGGGTTTCTTTCTCCTCCAAAGCATAAG
CCACCACCAAGCAAGTCCTTAGATAATAATAATAACAACAAGCCTAATGATAACGGGACA
GCCATCATTGTAGGAGTTGCTGCTGCAGGAGGTCTATTACTTCTTGTCATGTTAGTTTTC
CTTATATCATGTTGTAAACGCAAAAGGAGAAGGCCACGCGACCAAATGGGCTACTACAGG
GACAATTCTCATGGAGGCAATAGTACTGACTACTATAACAGTGGACCATATGGGAATTGG
CACAACAACAACAATATTCAATCAACGGATCATATGGTGAAAATGCCTAATCCTCAAGCA
CCGAGTACTAACGTAAGTTCAGAACTGAGTTGGCCAATAGCACCTCCACCACCACCACCA
ATGATGAGTAGCAGTGAATTAAGCTCAGCTGCTTTCTCTGGTCCGCAACAACCTCCATTG
CCACCCCCACACCCATCAATGGCTCTTGGTTTTAACCAAAGTAGTTTTACATACGATGAC
TTATCTACCGCAACTGGAGGATTTGTTAAGTCTAATCTATTGGGACAAGGTGGTTTTGGC
TTTGTACATAAAGGGGTCTTGCCTAATGGTAAGGATATAGCTGTCAAAAGTCTAAAAGCT
AATAGTGGACAAGGTGAACGAGAATTTCAAGCTGAAGTTGAAATTATTAGTCGTGTACAT
CATCGACATCTTGTCTCTTTAGTCGGTTATTGCATTGCTGGATCTCAAAGGTTGTTGGTA
TATGAGTTTGTTCCTAATGGCACTCTTGAGTATCACCTTCATGGAACTGGTCGCCCTGTT
ATGGACTTCCCTACTAGGCTTAAAATTGCATTAGGATCTGCCAAAGGCTTCGCGTACCTT
CATGAAGATTGCCACCCTCGTATTATTCACAGAGACATTAAAGCTGCTAATATTTTACTG
GACCATAACTGTGAAGCTAAGGTTGCTGATTTTGGATTAGCTAAACTTTCCAACGACACT
AATACACATGTTTCTACGCGTATCATGGGCACTTTTGGGTACTTAGCACCAGAATACGCT
TCAAGTGGCAAGCTAACTGAAAAGTCTGACGTCTATTCTTATGGTGTTATGCTGTTGGAA
CTTATAACTGGGCGTCGTCCTATAGACATCAGCAGTGATGATGATACTTTAGTGGAATGG
GCTAGGCCAATTCTGATTCGTGCAACAGAGGGTGGAAACTACGATGAATTAATAGATCCA
CGTTTGGAAGGAAATTTTGATGCCCAAGAGATGCTATGTATGGTAGCTTGTGCTGCTGCA
TCCATCAGACATTCAGCAAGAAGACGTCCCAAAATGAGTCAGATTGTACGTGCTTTAGAA
GGTGATGTGTCTCTGGATGATTTAAATGAGGGAATGAAGAAGTCCCCGAGTACTGCAATG
TTTGGTTCTAGTGAAAGTTCTGAATACGATGGAGGTTCATATGACCTTAAGAAATTCAAG
AAATCTGGAATGTCGAGTCAAGAATTCACAAGCAGTGAACATGGTACCGGTGAATTTGTC
CATTCCGGTGGTGAATCTCAAGAACATGGGCAGAAAAGGCACACCCCTTAA