Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062686
CDS Infomation

pacid=37471423 polypeptide=PGSC0003DMP400042203 locus=PGSC0003DMG400024394 ID=PGSC0003DMT400062686.v4.03 annot-version=v4.03
Sequence

ATGCGGAACAATTTCATGGATGGTGATTGGAGTTCATCAGAAATGTTCCCAATTGATCCT
CTCATGCCGTATGGATTTGGAGCCAATTTCCTCTCTCATATATCATTGATTGTTGATGGT
TCTAGAAATTTATATGTGCCTGGAAGTCAGGCACTTCAAGAAGCTTTTAAGTGCTTTTCA
AAATATACTGGCGCGCTGCTAGTCTGGTTTGCCACTGGATCGAACTCCAGAGGTAATAAC
CAAATATCAGGTGGTTATCAAGGTTCAAGAAATACAAGGTCTAGAATGTCAATTCAAACA
CAAGAAACAACTTCAAGTAGACATTATTTTATGGAACTCTTCTGGCAATCAAGATGCAAA
GGGGAAATTACCATCCCTGTGATATTTAGGAAGATTTCAAAGTTCACTCTGAATCAAATG
TACAAAGAAGCAAAACATCTTCAATCAATTCCTATTCTCTCACTAGCTGCTGCTTTAGTA
CCTCCATTTGACAATTTCTCTGGTGATGTTCTATCTGTTCAACTGGATAGTAGTGCTATG
GAATCTCAGAGTGGTGACGATCACCGGCCCTGTGAGGTTGATCACCGGGGATGTGATAAT
TCGTTTTTTCAGAGTTTAAATTGGTCTAGACATGCAGTTGAGCCCAGAACGGGTATTGAG
TTTCCTACTATCTTGGACAACCTAATAGCTGGGGAGCAAAATTCCAGTTTCACATCAGAG
GTCCTTGTTGGGACTGGATCCAGAATAATGAAAATTATCAGAATTAAATCTCTAAAGGTT
TATGCATTTGGCTTCTATGTGCATCCTTTTGATGTCTGCCGGAAGTTGGGTTGGAAATAT
GCCTCAGTTCCTTTTTGTGAACTGAACAAGCAACAAGATTTTTATCAGGATCTTCTCAGG
GAAGACATAAGCATGACCGTAAGGCTTGTTGTTAGCTGCAATGGAATCAAAATCAACACA
GTTCGAGATGTTTTTGAGAAATCTCTTCGAGCTCGGTTGTTCAAGGCAAATCCTGACACC
GATTATCACTGTCTAGAAACATTTGGTTCTATGTTCTCTCAAGATATTCCTATACATGCA
GGTACCACAATCAATTTTCGACGAACAACTGATGGACATTTAATTACTGAGATCGGGGGC
AACCATATTGGAGCAGTTCAGAGTAGAGAATTGTGTAGTAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042203
PEP Infomation

pacid=37471423 transcript=PGSC0003DMT400062686 locus=PGSC0003DMG400024394 ID=PGSC0003DMT400062686.v4.03 annot-version=v4.03
Sequence

MRNNFMDGDWSSSEMFPIDPLMPYGFGANFLSHISLIVDGSRNLYVPGSQALQEAFKCFS
KYTGALLVWFATGSNSRGNNQISGGYQGSRNTRSRMSIQTQETTSSRHYFMELFWQSRCK
GEITIPVIFRKISKFTLNQMYKEAKHLQSIPILSLAAALVPPFDNFSGDVLSVQLDSSAM
ESQSGDDHRPCEVDHRGCDNSFFQSLNWSRHAVEPRTGIEFPTILDNLIAGEQNSSFTSE
VLVGTGSRIMKIIRIKSLKVYAFGFYVHPFDVCRKLGWKYASVPFCELNKQQDFYQDLLR
EDISMTVRLVVSCNGIKINTVRDVFEKSLRARLFKANPDTDYHCLETFGSMFSQDIPIHA
GTTINFRRTTDGHLITEIGGNHIGAVQSRELCSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400062686
Transcript Infomation

pacid=37471423 locus=PGSC0003DMG400024394 ID=PGSC0003DMT400062686.v4.03 annot-version=v4.03
Sequence

ATGCGGAACAATTTCATGGATGGTGATTGGAGTTCATCAGAAATGTTCCCAATTGATCCT
CTCATGCCGTATGGATTTGGAGCCAATTTCCTCTCTCATATATCATTGATTGTTGATGGT
TCTAGAAATTTATATGTGCCTGGAAGTCAGGCACTTCAAGAAGCTTTTAAGTGCTTTTCA
AAATATACTGGCGCGCTGCTAGTCTGGTTTGCCACTGGATCGAACTCCAGAGGTAATAAC
CAAATATCAGGTGGTTATCAAGGTTCAAGAAATACAAGGTCTAGAATGTCAATTCAAACA
CAAGAAACAACTTCAAGTAGACATTATTTTATGGAACTCTTCTGGCAATCAAGATGCAAA
GGGGAAATTACCATCCCTGTGATATTTAGGAAGATTTCAAAGTTCACTCTGAATCAAATG
TACAAAGAAGCAAAACATCTTCAATCAATTCCTATTCTCTCACTAGCTGCTGCTTTAGTA
CCTCCATTTGACAATTTCTCTGGTGATGTTCTATCTGTTCAACTGGATAGTAGTGCTATG
GAATCTCAGAGTGGTGACGATCACCGGCCCTGTGAGGTTGATCACCGGGGATGTGATAAT
TCGTTTTTTCAGAGTTTAAATTGGTCTAGACATGCAGTTGAGCCCAGAACGGGTATTGAG
TTTCCTACTATCTTGGACAACCTAATAGCTGGGGAGCAAAATTCCAGTTTCACATCAGAG
GTCCTTGTTGGGACTGGATCCAGAATAATGAAAATTATCAGAATTAAATCTCTAAAGGTT
TATGCATTTGGCTTCTATGTGCATCCTTTTGATGTCTGCCGGAAGTTGGGTTGGAAATAT
GCCTCAGTTCCTTTTTGTGAACTGAACAAGCAACAAGATTTTTATCAGGATCTTCTCAGG
GAAGACATAAGCATGACCGTAAGGCTTGTTGTTAGCTGCAATGGAATCAAAATCAACACA
GTTCGAGATGTTTTTGAGAAATCTCTTCGAGCTCGGTTGTTCAAGGCAAATCCTGACACC
GATTATCACTGTCTAGAAACATTTGGTTCTATGTTCTCTCAAGATATTCCTATACATGCA
GGTACCACAATCAATTTTCGACGAACAACTGATGGACATTTAATTACTGAGATCGGGGGC
AACCATATTGGAGCAGTTCAGAGTAGAGAATTGTGTAGTAAGTGA