Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062666
CDS Infomation

pacid=37450492 polypeptide=PGSC0003DMP400042191 locus=PGSC0003DMG400024388 ID=PGSC0003DMT400062666.v4.03 annot-version=v4.03
Sequence

ATGGATCATAGCTCCGGGGAAGACACTGATATAAGTGAATCAGAGATCGAAGAATATGGA
GAAAAATCTTATGAAGATTTGAAGAGCGGAAGTCATTCTCTTAAGATATCAGATGTGGCA
TACACTTGCCCCTATTGTCCAAAGAAAAGAAAGCGTGACTTTTTGTACAAGGAACTCATA
CAGCATGCAAGTGGGGTGGGAAGCTGTAGCTCTAATAAGAGAACTGCAAGAGAAAAGGCG
AATCATCTTGGGTTGGCAAAGTACTTGGAAACTGATGCTGCAGTTGCTGCTGATTCATCT
AAACCTGATGCCGAGCCAGATTCTCAAACTGACCCTCTTGCGGATCATGACCGTGATGAG
ATGTTTGTCTGGCCTTGGATTGGGATTGTTGTGAACATTCCCACTGAATTCAAGGATGGA
CGCAATGTGGGAGAAAGTGGTTCTAAGCTGAGGGATCAATTGACAAGGAGAGGTTTCAAC
CCTACACGGGTACGTCCTCTGTGGAATTACCAAGGCCATTCTGGTACTGCTCTTGTTGAA
TTCAACAAAGACTGGTCCGGATTTGGTAATGCAATGGCATATGAGAAGGCTTATGAGGCT
GACCATCATGGCAAGAAGGACTGGAAAGTCAACCATTGTAAAAACTCTGATCTGTATGCT
TGGATTGCTCGTGCCGATGACTATAAAGCTATTAATATCATTGGTGAAAATCTCCGCAAG
GTTGGAGACCTTAGAACCATTTCTGATATCATGGAAGAAGAAGCTCGGAAGACGAACAAG
CTCGTTTCTAATTTGACAAATGTTATTGAAGTCAAGAAGTTACACCTAAAGGAGATGGCA
GACAAATTTAAGGAGACTTCACAGTCTTTGAAACAATTGGTTGAAGAGAAAGATAAACTG
CATCAAGCTTACAATGAAGAGATAAGAAAAATCCAGTCAAGCGCACGTGATCATTTCCAG
AAGATATTTAATGATCATGAAAAGTTGAAATTGCAATTGGAATCTCAAAAGAAAGAGCTT
GAGCTACGAGGTAGAGAACTGGAGAAACGTGAGGCGAAAAATGAAAGTGATAGGAAGAAA
CTGTCTGAGGATCTTGAACAGAATGCTACTTTAAATACCTCACTTAGTGCCGCGGCTGAA
GAGCAAAGGAAGGTTGACGAAAAAGTACTGAAATTGGCTGAAGAGCAGAAGAGGCAAAAG
GAAGATCTCCATAAGAGAATAATTCAGCTGGAAAAACAACTCGATGCGAAACAAGCGGTA
GAGCTGGAAATTGAGCAGTTGAGAGGGTCACTGAACGTGATGAAACATATTGAAGATGAA
GGTGATCAAGAAGTTTTGAAAAAGGTGGACACACTCCTTAAAAGTTTAAGAGAGAAGGAA
GAAGAATACGATGGTTTGGAAGCATTAAATCAAACTCTGATAGTGAAGGAAAGAAACAGT
AATGATGAGCTGCAAGACGCTCGCAAAGAATTGGTTAATGGTTTGAAGGAACTACCAAGA
GTTGGTCCAATTGGTGTTAAGAGGATGGGGGAGCTTGACAACAGACCATTCCATGAAGCA
ATGAAGAGGAGCTATAATGAGTCAGAAGCAGATGAAAGAGCTACAGAGTTATGCTCATTG
TGGGAGGAATACCTTAGAGACCCTGGATGGCATCCCATTAAAGTCGTTATGGTTAACGGG
AAACCTGAGAACGTGATAGACGATGAAGATGAAAAGCTGAAAGACTTGAAGAAAAATTAT
GGTGAAGAAGTTTGCAAAGCTGTGACAGCAGCTTTGATGGAGGTAAACGATTACAACCCG
AGTGGAAGATACATCATCTCAGAGCTGTGGAATTATGCAGTGAATAAGAAAGCAACTTTG
GAGGAGGGAGTTACTGTGTTACTAAACATGTGGAAAAAGAAGAGAGGATCCGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042191
PEP Infomation

pacid=37450492 transcript=PGSC0003DMT400062666 locus=PGSC0003DMG400024388 ID=PGSC0003DMT400062666.v4.03 annot-version=v4.03
Sequence

MDHSSGEDTDISESEIEEYGEKSYEDLKSGSHSLKISDVAYTCPYCPKKRKRDFLYKELI
QHASGVGSCSSNKRTAREKANHLGLAKYLETDAAVAADSSKPDAEPDSQTDPLADHDRDE
MFVWPWIGIVVNIPTEFKDGRNVGESGSKLRDQLTRRGFNPTRVRPLWNYQGHSGTALVE
FNKDWSGFGNAMAYEKAYEADHHGKKDWKVNHCKNSDLYAWIARADDYKAINIIGENLRK
VGDLRTISDIMEEEARKTNKLVSNLTNVIEVKKLHLKEMADKFKETSQSLKQLVEEKDKL
HQAYNEEIRKIQSSARDHFQKIFNDHEKLKLQLESQKKELELRGRELEKREAKNESDRKK
LSEDLEQNATLNTSLSAAAEEQRKVDEKVLKLAEEQKRQKEDLHKRIIQLEKQLDAKQAV
ELEIEQLRGSLNVMKHIEDEGDQEVLKKVDTLLKSLREKEEEYDGLEALNQTLIVKERNS
NDELQDARKELVNGLKELPRVGPIGVKRMGELDNRPFHEAMKRSYNESEADERATELCSL
WEEYLRDPGWHPIKVVMVNGKPENVIDDEDEKLKDLKKNYGEEVCKAVTAALMEVNDYNP
SGRYIISELWNYAVNKKATLEEGVTVLLNMWKKKRGSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400062666
Transcript Infomation

pacid=37450492 locus=PGSC0003DMG400024388 ID=PGSC0003DMT400062666.v4.03 annot-version=v4.03
Sequence

ATGGATCATAGCTCCGGGGAAGACACTGATATAAGTGAATCAGAGATCGAAGAATATGGA
GAAAAATCTTATGAAGATTTGAAGAGCGGAAGTCATTCTCTTAAGATATCAGATGTGGCA
TACACTTGCCCCTATTGTCCAAAGAAAAGAAAGCGTGACTTTTTGTACAAGGAACTCATA
CAGCATGCAAGTGGGGTGGGAAGCTGTAGCTCTAATAAGAGAACTGCAAGAGAAAAGGCG
AATCATCTTGGGTTGGCAAAGTACTTGGAAACTGATGCTGCAGTTGCTGCTGATTCATCT
AAACCTGATGCCGAGCCAGATTCTCAAACTGACCCTCTTGCGGATCATGACCGTGATGAG
ATGTTTGTCTGGCCTTGGATTGGGATTGTTGTGAACATTCCCACTGAATTCAAGGATGGA
CGCAATGTGGGAGAAAGTGGTTCTAAGCTGAGGGATCAATTGACAAGGAGAGGTTTCAAC
CCTACACGGGTACGTCCTCTGTGGAATTACCAAGGCCATTCTGGTACTGCTCTTGTTGAA
TTCAACAAAGACTGGTCCGGATTTGGTAATGCAATGGCATATGAGAAGGCTTATGAGGCT
GACCATCATGGCAAGAAGGACTGGAAAGTCAACCATTGTAAAAACTCTGATCTGTATGCT
TGGATTGCTCGTGCCGATGACTATAAAGCTATTAATATCATTGGTGAAAATCTCCGCAAG
GTTGGAGACCTTAGAACCATTTCTGATATCATGGAAGAAGAAGCTCGGAAGACGAACAAG
CTCGTTTCTAATTTGACAAATGTTATTGAAGTCAAGAAGTTACACCTAAAGGAGATGGCA
GACAAATTTAAGGAGACTTCACAGTCTTTGAAACAATTGGTTGAAGAGAAAGATAAACTG
CATCAAGCTTACAATGAAGAGATAAGAAAAATCCAGTCAAGCGCACGTGATCATTTCCAG
AAGATATTTAATGATCATGAAAAGTTGAAATTGCAATTGGAATCTCAAAAGAAAGAGCTT
GAGCTACGAGGTAGAGAACTGGAGAAACGTGAGGCGAAAAATGAAAGTGATAGGAAGAAA
CTGTCTGAGGATCTTGAACAGAATGCTACTTTAAATACCTCACTTAGTGCCGCGGCTGAA
GAGCAAAGGAAGGTTGACGAAAAAGTACTGAAATTGGCTGAAGAGCAGAAGAGGCAAAAG
GAAGATCTCCATAAGAGAATAATTCAGCTGGAAAAACAACTCGATGCGAAACAAGCGGTA
GAGCTGGAAATTGAGCAGTTGAGAGGGTCACTGAACGTGATGAAACATATTGAAGATGAA
GGTGATCAAGAAGTTTTGAAAAAGGTGGACACACTCCTTAAAAGTTTAAGAGAGAAGGAA
GAAGAATACGATGGTTTGGAAGCATTAAATCAAACTCTGATAGTGAAGGAAAGAAACAGT
AATGATGAGCTGCAAGACGCTCGCAAAGAATTGGTTAATGGTTTGAAGGAACTACCAAGA
GTTGGTCCAATTGGTGTTAAGAGGATGGGGGAGCTTGACAACAGACCATTCCATGAAGCA
ATGAAGAGGAGCTATAATGAGTCAGAAGCAGATGAAAGAGCTACAGAGTTATGCTCATTG
TGGGAGGAATACCTTAGAGACCCTGGATGGCATCCCATTAAAGTCGTTATGGTTAACGGG
AAACCTGAGAACGTGATAGACGATGAAGATGAAAAGCTGAAAGACTTGAAGAAAAATTAT
GGTGAAGAAGTTTGCAAAGCTGTGACAGCAGCTTTGATGGAGGTAAACGATTACAACCCG
AGTGGAAGATACATCATCTCAGAGCTGTGGAATTATGCAGTGAATAAGAAAGCAACTTTG
GAGGAGGGAGTTACTGTGTTACTAAACATGTGGAAAAAGAAGAGAGGATCCGATTGA