Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062645
CDS Infomation

pacid=37462381 polypeptide=PGSC0003DMP400042181 locus=PGSC0003DMG400024378 ID=PGSC0003DMT400062645.v4.03 annot-version=v4.03
Sequence

ATGAAATTCCAAGGATCAACATTTCTTTTCTCTAAAACGCGGCTCCTCTTTCCCATTCAC
GCGCCGCCGTTCACCACCACATCATCTCTCACCGCCACCACCCATAACGTTACCGTCATC
AGAAGGAAAAAGGATACTTCCATTTATGAATCATATGTTATTAATATGGGCGGTGTGACG
TCATCCATCGCCGCTAAATTCGCGTTTTTCCCACCGAATCCTCCGTCGTACACGGTTGTT
TCTGACAAGGCATGTGGCGGTAAATTATGCATACCTGAGATACCTCGGAGGGAAAACGTC
GACGTTTTGAAGCTGCGGACTCACCGGGGAAACGAAATCGTCGCCGTATACGTGAAGCAC
CCAAAGGCATCCGCCTCTATGCTTTACTCTCATGGAAATGCTGCTGATTTGGGGCAAATG
TTCGAACTGTTTGTTGAGTTAAGCCTCCGTCTTCGGGTCAATCTCATGGGGTATGATTAC
TCTGGATATGGACAGTCGACTGGAAAGACATCTGAGTGTAATACGTACGCGGACATTGAT
GCAGTATATAAATGCCTAAAGGAACAGTACGAGGTCAAAGATGAACAGCTAATACTGTAT
GGTCAATCTGTTGGAAGTGGTCCAACTGTTGATCTTGCATCACACACACCCAATTTAAGA
GCTGTTGTTTTACACGGTCCAATATTGTCTGGTCTAAGAGTGTTGTACCCTCTCAAACAC
ACACATTGGTTTGACATTTATAAGAATGTCGAAAAGATTAGCTTGGTGAATTGTCCTGTT
CTAGTCATCCATGGAACAGCAGATGAAGTTGTTGATTGCTCCCACGGGAAACAACTCTAT
GAACTGTGCAAGGAGAAGTATGAACCGTTATGGATAAATGGAGGCGGTCATTGCAATCTT
GAACTTTACCCGGTTTACATCAAGCATCTAAAAAAGTTTGTTCTTGGTCTTGGCAAATCA
AAGACTGCTACAAATGGTTCTCATAAACCATCTTTAGTCTCTGACACTAAGAAGCCAGCT
GAAAGTGTCTCCTCAAACACACTCAATCTGCATTCTGACCTTCCAGAAATTTCAAGAAAC
AGTTTGGATAGTCGACTTGATAAGGCAAAGAAGTCGAACAAACCTGAGAAGTCTCGGATG
AGCACAGGTTGTGTTGACAGGTTTAGGAGACGGAAGGGATTGGTGTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042181
PEP Infomation

pacid=37462381 transcript=PGSC0003DMT400062645 locus=PGSC0003DMG400024378 ID=PGSC0003DMT400062645.v4.03 annot-version=v4.03
Sequence

MKFQGSTFLFSKTRLLFPIHAPPFTTTSSLTATTHNVTVIRRKKDTSIYESYVINMGGVT
SSIAAKFAFFPPNPPSYTVVSDKACGGKLCIPEIPRRENVDVLKLRTHRGNEIVAVYVKH
PKASASMLYSHGNAADLGQMFELFVELSLRLRVNLMGYDYSGYGQSTGKTSECNTYADID
AVYKCLKEQYEVKDEQLILYGQSVGSGPTVDLASHTPNLRAVVLHGPILSGLRVLYPLKH
THWFDIYKNVEKISLVNCPVLVIHGTADEVVDCSHGKQLYELCKEKYEPLWINGGGHCNL
ELYPVYIKHLKKFVLGLGKSKTATNGSHKPSLVSDTKKPAESVSSNTLNLHSDLPEISRN
SLDSRLDKAKKSNKPEKSRMSTGCVDRFRRRKGLVW*

Transcript Sequence

Transcript ID

PGSC0003DMT400062645
Transcript Infomation

pacid=37462381 locus=PGSC0003DMG400024378 ID=PGSC0003DMT400062645.v4.03 annot-version=v4.03
Sequence

ATGAAATTCCAAGGATCAACATTTCTTTTCTCTAAAACGCGGCTCCTCTTTCCCATTCAC
GCGCCGCCGTTCACCACCACATCATCTCTCACCGCCACCACCCATAACGTTACCGTCATC
AGAAGGAAAAAGGATACTTCCATTTATGAATCATATGTTATTAATATGGGCGGTGTGACG
TCATCCATCGCCGCTAAATTCGCGTTTTTCCCACCGAATCCTCCGTCGTACACGGTTGTT
TCTGACAAGGCATGTGGCGGTAAATTATGCATACCTGAGATACCTCGGAGGGAAAACGTC
GACGTTTTGAAGCTGCGGACTCACCGGGGAAACGAAATCGTCGCCGTATACGTGAAGCAC
CCAAAGGCATCCGCCTCTATGCTTTACTCTCATGGAAATGCTGCTGATTTGGGGCAAATG
TTCGAACTGTTTGTTGAGTTAAGCCTCCGTCTTCGGGTCAATCTCATGGGGTATGATTAC
TCTGGATATGGACAGTCGACTGGAAAGACATCTGAGTGTAATACGTACGCGGACATTGAT
GCAGTATATAAATGCCTAAAGGAACAGTACGAGGTCAAAGATGAACAGCTAATACTGTAT
GGTCAATCTGTTGGAAGTGGTCCAACTGTTGATCTTGCATCACACACACCCAATTTAAGA
GCTGTTGTTTTACACGGTCCAATATTGTCTGGTCTAAGAGTGTTGTACCCTCTCAAACAC
ACACATTGGTTTGACATTTATAAGAATGTCGAAAAGATTAGCTTGGTGAATTGTCCTGTT
CTAGTCATCCATGGAACAGCAGATGAAGTTGTTGATTGCTCCCACGGGAAACAACTCTAT
GAACTGTGCAAGGAGAAGTATGAACCGTTATGGATAAATGGAGGCGGTCATTGCAATCTT
GAACTTTACCCGGTTTACATCAAGCATCTAAAAAAGTTTGTTCTTGGTCTTGGCAAATCA
AAGACTGCTACAAATGGTTCTCATAAACCATCTTTAGTCTCTGACACTAAGAAGCCAGCT
GAAAGTGTCTCCTCAAACACACTCAATCTGCATTCTGACCTTCCAGAAATTTCAAGAAAC
AGTTTGGATAGTCGACTTGATAAGGCAAAGAAGTCGAACAAACCTGAGAAGTCTCGGATG
AGCACAGGTTGTGTTGACAGGTTTAGGAGACGGAAGGGATTGGTGTGGTAA