Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062618
CDS Infomation

pacid=37424215 polypeptide=PGSC0003DMP400042160 locus=PGSC0003DMG400024368 ID=PGSC0003DMT400062618.v4.03 annot-version=v4.03
Sequence

ATGAGTTCAGGACTGTTGCCAATGCCGGAGAATTATTTGCCGATTCAGATTCAGCCCAAG
ACGTCGGTGAATACTGAGAGTGGTCTTACCTTCAACCTGCCCACAAATGATGTAGTCGCT
CCAAGGAAACGTTCAAGAGATTCATTCACTCCTTCTTTCTCTACCCCTCAGAAACCCTGC
AACGGACTCTCTCAAATTCCATCGTTTGTCGGTGATGATGTTTTGCCACTTGTTCAACAG
TATCAGTTGGATATCAATTCCATCATTTCTCACCATGTAAGCTTAATCCCCAATTCAATT
CTCTCTGTTTTATTTTTTTCTTTTTCTTTCATTTACTCATTGTTTGTTTATTTACAGACG
AAGAAAATAAGATTGGAATTAGAAGAGCAACAGAAATATCAATCGAGAATGCTGGTATCA
GCAATTAGCGAAAGAGTAATGAAGAAAATGAAGGAAAAAGACGAACAAATACAGAGAATA
GGAAAAATCAACTTAGTCCTACAAGAAAGAGTAAAAACTCTTTACATGGAAAATCAACTA
TGGAGAGACTTAGCACAAGCCAACGAAGCCACCGCCAATTCACTCCGCAGCAACTTAGAA
CAGGTCCTGGCACACGTTACCGAAGAACGCCTCTCCGCCGAGGAAGACGCCGAGTCATGC
TGCGGCAGCAACAACGAAGAGGATGATAAAGAAGAAGAAGTGCGCACGTTAGCGGGAGAT
GCGCAGGATAAGAGAAACAGAATGTGCAGAAGGTGTGGAGAGAGGGAATCATGTGTATTG
CTGTTACCGTGCAGACACTTGTGTTTATGCACAGTTTGTGGGTCAAGTTTACAGGATGCT
TGCCCAGTGTGTAATTCGAATATGAATGCCACAGTTCATGTGAACATGTCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042160
PEP Infomation

pacid=37424215 transcript=PGSC0003DMT400062618 locus=PGSC0003DMG400024368 ID=PGSC0003DMT400062618.v4.03 annot-version=v4.03
Sequence

MSSGLLPMPENYLPIQIQPKTSVNTESGLTFNLPTNDVVAPRKRSRDSFTPSFSTPQKPC
NGLSQIPSFVGDDVLPLVQQYQLDINSIISHHVSLIPNSILSVLFFSFSFIYSLFVYLQT
KKIRLELEEQQKYQSRMLVSAISERVMKKMKEKDEQIQRIGKINLVLQERVKTLYMENQL
WRDLAQANEATANSLRSNLEQVLAHVTEERLSAEEDAESCCGSNNEEDDKEEEVRTLAGD
AQDKRNRMCRRCGERESCVLLLPCRHLCLCTVCGSSLQDACPVCNSNMNATVHVNMSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400062618
Transcript Infomation

pacid=37424215 locus=PGSC0003DMG400024368 ID=PGSC0003DMT400062618.v4.03 annot-version=v4.03
Sequence

ATGAGTTCAGGACTGTTGCCAATGCCGGAGAATTATTTGCCGATTCAGATTCAGCCCAAG
ACGTCGGTGAATACTGAGAGTGGTCTTACCTTCAACCTGCCCACAAATGATGTAGTCGCT
CCAAGGAAACGTTCAAGAGATTCATTCACTCCTTCTTTCTCTACCCCTCAGAAACCCTGC
AACGGACTCTCTCAAATTCCATCGTTTGTCGGTGATGATGTTTTGCCACTTGTTCAACAG
TATCAGTTGGATATCAATTCCATCATTTCTCACCATGTAAGCTTAATCCCCAATTCAATT
CTCTCTGTTTTATTTTTTTCTTTTTCTTTCATTTACTCATTGTTTGTTTATTTACAGACG
AAGAAAATAAGATTGGAATTAGAAGAGCAACAGAAATATCAATCGAGAATGCTGGTATCA
GCAATTAGCGAAAGAGTAATGAAGAAAATGAAGGAAAAAGACGAACAAATACAGAGAATA
GGAAAAATCAACTTAGTCCTACAAGAAAGAGTAAAAACTCTTTACATGGAAAATCAACTA
TGGAGAGACTTAGCACAAGCCAACGAAGCCACCGCCAATTCACTCCGCAGCAACTTAGAA
CAGGTCCTGGCACACGTTACCGAAGAACGCCTCTCCGCCGAGGAAGACGCCGAGTCATGC
TGCGGCAGCAACAACGAAGAGGATGATAAAGAAGAAGAAGTGCGCACGTTAGCGGGAGAT
GCGCAGGATAAGAGAAACAGAATGTGCAGAAGGTGTGGAGAGAGGGAATCATGTGTATTG
CTGTTACCGTGCAGACACTTGTGTTTATGCACAGTTTGTGGGTCAAGTTTACAGGATGCT
TGCCCAGTGTGTAATTCGAATATGAATGCCACAGTTCATGTGAACATGTCTTCTTGA