Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062611
CDS Infomation

pacid=37457140 polypeptide=PGSC0003DMP400042156 locus=PGSC0003DMG400024365 ID=PGSC0003DMT400062611.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCTTCTCACAGCAGTCATCAATAAATCAATAGAAATAGCTGGAAATGTA
CTCTTTCAAGAAGGAACGCGTTTATATTGGTTAAAAGAGGACATAGATTGGCTCCACAGA
GAAATGAGACACATTCGATCATATGTAGACGATGCAAAGGCCAAGGAAGTTGGAGGCCAT
TCAAGGGTCAAAAACTTATTAAAAGATATTCAACAACTGGCAGGTGATGTGGAGGATCTA
TTAGATGAGTTTCTTCCAAAAATTCAACAATCCAATAATTTCATTTGTTGCCTTAAGACG
GTTTCTTTTGCGGATGAGTTTGCTATGGAGATTGAGAAGATAAAAAGAAGAGTTGCTGAC
ATTGATCGTGTAAGGACAACTTACAACATCATGGATACAAGTAACAACAATAGTGATGAT
TGCATTCCATTGGACCAAAGAAGATTATTCCTTCATGCTGATGAAACAGAGGTCATCGGT
TTGGATGATGACTTCAATAAGCTGCAAGCCAAATTACTTGATCATGATTTGCCTTATGGA
GTTGTTTCAATAGTTGGCATGCCCGGTCTAGGAAAAACAACTCTTGCCAAGAAACTTTAT
AGGCAAGTCCGTGATCAATTTGAGTGTTCGGGACTGGTCTATGTTTCACAACAGCCAAGG
GCGGGAGAAATCTTACATGACATAGCCAAACAAGTTGGACTGATGGAAGAGGAAAGGAAA
GAAAACTTGGAGAACAACCTACGATCACTCTTGAAAATAAAAAGGTATGTTATTCTCTTA
GATGACATTTGGGATGTTGAAATTTGGGATGATCTAAAACTTGTCCTTCCTGAATGTGAT
TCAAAAATTGGCAGTAGGATAATTATAACCTCTCGAAATAGTAATGTAGGCAGATACATA
GGAGGGGATTTCTCAATACACGTGTTGCAACCTCTAGATTCGGAAAACAGTTTTGAACTC
TTTACCAAGAAAATCTTTACTTTTGATAACAATAATAATTGGGCCAATGCTTCACCAGAC
TTGGTAGATATTGGTAGAAGTATAGTTGGAAGATGTGGAGGTATACCTCTAGCCATTGAG
GTGACCGCAGGCATGTTAAGGGCAAGAGAAAGAACAGAACGTGCATGGAACAGAGTACTT
GAGAGTATGGGTCATAAAATTCAAGATGGATGTGCTAAGGTATTGGCTCTGAGTTACAAT
GATTTGCCAATTGCATTAAGGCCATGTTTCTTGTATTTTGGCCTTTACCCCGAGGACCAT
GAAATTCGTGCTTTTGATCTGACAAATATGTGGATTGCTGAGAAGTTGATAGTTGTAAAC
TATAGTGGTAATAGGCGAGAGGCTGAAAGTTTGGCAGAGGATATCCTAAATGATTTGGTT
TCTAGAAACTTGATTCAAGTTGTCGAAAGGACATATGATGGAAGAATTTCAAGTTGTCGC
ATACATGACTTGTTACATAGTTTGTGTGTGGATTTGGCTAAGGAAAGTAACTTCTTTCAC
ACCGAGCACAATGCATTTGGTGATCCCAGCAATGTTGCTAGGGTGCGAAGGATTACATTC
TACTCTGATAATAATGCCATGAATGAGTTCTTCCGTTCAAATACTAAGCTTGAGAAGCTT
CGTGCAATGGGAAACTGCCAAATTGTATGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042156
PEP Infomation

pacid=37457140 transcript=PGSC0003DMT400062611 locus=PGSC0003DMG400024365 ID=PGSC0003DMT400062611.v4.03 annot-version=v4.03
Sequence

MAEILLTAVINKSIEIAGNVLFQEGTRLYWLKEDIDWLHREMRHIRSYVDDAKAKEVGGH
SRVKNLLKDIQQLAGDVEDLLDEFLPKIQQSNNFICCLKTVSFADEFAMEIEKIKRRVAD
IDRVRTTYNIMDTSNNNSDDCIPLDQRRLFLHADETEVIGLDDDFNKLQAKLLDHDLPYG
VVSIVGMPGLGKTTLAKKLYRQVRDQFECSGLVYVSQQPRAGEILHDIAKQVGLMEEERK
ENLENNLRSLLKIKRYVILLDDIWDVEIWDDLKLVLPECDSKIGSRIIITSRNSNVGRYI
GGDFSIHVLQPLDSENSFELFTKKIFTFDNNNNWANASPDLVDIGRSIVGRCGGIPLAIE
VTAGMLRARERTERAWNRVLESMGHKIQDGCAKVLALSYNDLPIALRPCFLYFGLYPEDH
EIRAFDLTNMWIAEKLIVVNYSGNRREAESLAEDILNDLVSRNLIQVVERTYDGRISSCR
IHDLLHSLCVDLAKESNFFHTEHNAFGDPSNVARVRRITFYSDNNAMNEFFRSNTKLEKL
RAMGNCQIVW*

Transcript Sequence

Transcript ID

PGSC0003DMT400062611
Transcript Infomation

pacid=37457140 locus=PGSC0003DMG400024365 ID=PGSC0003DMT400062611.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCTTCTCACAGCAGTCATCAATAAATCAATAGAAATAGCTGGAAATGTA
CTCTTTCAAGAAGGAACGCGTTTATATTGGTTAAAAGAGGACATAGATTGGCTCCACAGA
GAAATGAGACACATTCGATCATATGTAGACGATGCAAAGGCCAAGGAAGTTGGAGGCCAT
TCAAGGGTCAAAAACTTATTAAAAGATATTCAACAACTGGCAGGTGATGTGGAGGATCTA
TTAGATGAGTTTCTTCCAAAAATTCAACAATCCAATAATTTCATTTGTTGCCTTAAGACG
GTTTCTTTTGCGGATGAGTTTGCTATGGAGATTGAGAAGATAAAAAGAAGAGTTGCTGAC
ATTGATCGTGTAAGGACAACTTACAACATCATGGATACAAGTAACAACAATAGTGATGAT
TGCATTCCATTGGACCAAAGAAGATTATTCCTTCATGCTGATGAAACAGAGGTCATCGGT
TTGGATGATGACTTCAATAAGCTGCAAGCCAAATTACTTGATCATGATTTGCCTTATGGA
GTTGTTTCAATAGTTGGCATGCCCGGTCTAGGAAAAACAACTCTTGCCAAGAAACTTTAT
AGGCAAGTCCGTGATCAATTTGAGTGTTCGGGACTGGTCTATGTTTCACAACAGCCAAGG
GCGGGAGAAATCTTACATGACATAGCCAAACAAGTTGGACTGATGGAAGAGGAAAGGAAA
GAAAACTTGGAGAACAACCTACGATCACTCTTGAAAATAAAAAGGTATGTTATTCTCTTA
GATGACATTTGGGATGTTGAAATTTGGGATGATCTAAAACTTGTCCTTCCTGAATGTGAT
TCAAAAATTGGCAGTAGGATAATTATAACCTCTCGAAATAGTAATGTAGGCAGATACATA
GGAGGGGATTTCTCAATACACGTGTTGCAACCTCTAGATTCGGAAAACAGTTTTGAACTC
TTTACCAAGAAAATCTTTACTTTTGATAACAATAATAATTGGGCCAATGCTTCACCAGAC
TTGGTAGATATTGGTAGAAGTATAGTTGGAAGATGTGGAGGTATACCTCTAGCCATTGAG
GTGACCGCAGGCATGTTAAGGGCAAGAGAAAGAACAGAACGTGCATGGAACAGAGTACTT
GAGAGTATGGGTCATAAAATTCAAGATGGATGTGCTAAGGTATTGGCTCTGAGTTACAAT
GATTTGCCAATTGCATTAAGGCCATGTTTCTTGTATTTTGGCCTTTACCCCGAGGACCAT
GAAATTCGTGCTTTTGATCTGACAAATATGTGGATTGCTGAGAAGTTGATAGTTGTAAAC
TATAGTGGTAATAGGCGAGAGGCTGAAAGTTTGGCAGAGGATATCCTAAATGATTTGGTT
TCTAGAAACTTGATTCAAGTTGTCGAAAGGACATATGATGGAAGAATTTCAAGTTGTCGC
ATACATGACTTGTTACATAGTTTGTGTGTGGATTTGGCTAAGGAAAGTAACTTCTTTCAC
ACCGAGCACAATGCATTTGGTGATCCCAGCAATGTTGCTAGGGTGCGAAGGATTACATTC
TACTCTGATAATAATGCCATGAATGAGTTCTTCCGTTCAAATACTAAGCTTGAGAAGCTT
CGTGCAATGGGAAACTGCCAAATTGTATGGTGA