Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062594
CDS Infomation

pacid=37454578 polypeptide=PGSC0003DMP400042145 locus=PGSC0003DMG400024356 ID=PGSC0003DMT400062594.v4.03 annot-version=v4.03
Sequence

ATGGCTGATCGGAACAATTCATCGGCGATTACAGTGACGGCAGCGGTGAAGCCGATATGG
GCGAAGCAAGCAGAAGAAGCGAAGCTTAAGAGCGAAGCAGAGAAAGATGCGGCTGCGAAA
GCTGCTTTCGATGCTACGTTTAAGAACGTCGAAGCTTCAGTCACTGCAGCCGCAGCCGCA
TCCGACAGTGACTTAGACGATGAGGAATATGAGCAGAAGAGGCTTGCGGAGAAGCCGATC
GGTCCGGTTGACCCTATAAAATGTACGGCCGCTGGCACTGGAATCGCCGGTGGAACAGCG
TGTGCTCCGTCAACTTTCACCGTTGTGACGAAGGATTCTGATGGTCGTAAGGTACCACAT
GGTGGGGCGACCGTTAAGATTAGAGTTTCACCTGGTGTTGGAGTTGGAGGATCAGATTTG
GAAGGAATTGTGAAGGATATGGGTGATGGGACATACACAGTGAGTTATATTGTTCAGAAG
AGAGGAAATTATATGGTGAATGTTGAATGTAATGGAAAGCCTATCATGGGTAGTCCTTTC
CCTGTTTTCTTCAGCACAGGCAGTACGACTGGTGGGCTATTGGGTATAGTACCGTCAACC
ACATTTCCAAATATGGTCAACCAGAACATGCCTAATATGCCAAACTATTCTGGTTCTGTA
TCTGGGGCAGTCCCAGGATTGCTTGGGATGATACCAGGTATTGTTCCTGGAGCTTCTGGA
GGTGTAGTTTTACCTGGAATTGGAGCATCTATTGGGGAAGTTTGCCGAGAGTACCTTTAT
GGACGATGTGCAAAAACTGATTGCAAATTCAATCACCCCCCTCACAATCTTCTAATGACT
GCTCTAGCTGCAACCACCAGTATGGGAACACTTAGTCAAGTGCCCATGGCACCTTCTGCG
GCTGCTATGGCTGCTGCTCAGGCAATTGTTGCTGCACAAGCTCTTCAAGCGCATGCTGCT
CAGGCACAAGCACAGTCTGGAAAAGATTCGTCTGGTGACAAAGATAGAAAGGCCGAATCC
CTTAAAAGAACTTTGCAAGTCAGCAATCTCAGCCCACTTCTGACAGTGGATCAGTTGAAA
CAGCTGTTTGGTTTCTGTGGTGCAATCATTGATTGTAGCATTACTGAATCCAAACATTTT
GCTTACATCGAATACTCAAAACCCGAAGAAGCAACTGCTGCTTTAGCATTGAACAATATA
GAAGTTGGTGGTCGCCCCTTAAATGTTGAAATGGCAAAACAACTTCCTCCAAAGGCAGCT
GTCTTAAATTCATCAATGGGCTCTTCTTCTTTGCCCTTGATGATGCAGCAAGCAGTAGCA
ATGCAGCAGATGCAGTTCCAGCAAGCCCTATTAATGCAGCAAGCTATGACTGAACAACAA
GCTGCTAATCGAGCTGCAACCATGAAAACTGCTACAGATTTGGCTGCCGCAAGAGCTGCA
GAAATAAGCAAGATGTTGAAAGCGAATGGCCTGGTTTCTGAAGATAAGGAAACTGATGAC
AAAGCTAAGTCACCTTCTCCCAGTCGTGCTAGGTCAAGATCCAGGTCGCCATCCAAATCT
CGATCCAGATCAAGATCTCCAATAAGTTATAGGCGAAGGCGGAGATCCCGTTCTTTCTCT
CCTCCACGGAGATCAAGAGATTATAGATCCAGGTCACCTGTGAGATCCCGGCGCTATTCA
GGCTACGAAGATGAAAGGCGGCCATATAGGGATGTTAGATATGCTAATGAAAGAAGTCGA
AGACGGGATTTTGTTAGATTCTATGATCGTCGTTCTCCTGTTTCAAGGAGAAACAGAAGT
AGAAGCACAAGTCCCCGAACTAGAAAATCTTACCGTGACGATTCAGGCTCACCAAAACAC
CGCCGAGAAAGTCCAGCACTTAAGACAAGTAGAGCTTCTCGCCATGAGTCACTATCGCCT
GAACATAGACGAAAAAGTAGGTCATCCCCAAAAGATGGTGAAAGAAAATCAAAATATAGC
AGGCGCTCGAGATCAAAGTCTGCTGAAGTTAGGGACCAGTCTGATGATAAGCTAGAAGGA
AGCAGGGGTGAGAAATCCAGGCAGAAGGATCAAAGAAGGTCAGCATCACCACAGGTTGAT
GAAGATGCACAGAAGAAAATGTCACCGGAAGTTGTGGAAGAAAGCAAGTCAAAGCAGAGA
AGAACCTCCAGGTCCAGATCTCCAGAAGAGAAGCATCTTTCTAGCAGAAGCAGAGAAGAG
AAAAGAAAGCATCATGCTAGAAGGCGCTCCAGGTCAAGGTCCAAATCTCCTGAAGAGAAA
GTTCACTCAAGTGATAAATTAGACAGAAATAAAGGAGATAAACCTAAGCATCGAAGTAGA
AGGCACTCAAAGTCAAGGTCCAGATCTCCTGAAGAAAGACATCATTCAAGTGCTAAATTG
GAAAGGAGCAGAAAAGAGAAATCAAAGAGTCGAAGTAAAAAGCGCTCCAGGTCAAGATCT
GTCGATGATAAGCAGCACGGAACTAAACAGTCAGCAAGCCGTTCTGATAGCCGACGATCA
AAGCTCAGGGCACGTTCTAGATCAAATTCTTCTGAAAGTAGGCATGGATCAGGTCAAGAT
GAAACCATAAAGGATGAAGTGAGAGGTCATAGGGGTCACCAGAGAAGATCTAGGCAGGAT
GACCATAATCATGGAACAACTGAGATTAGCTTGATGGAAGAAGATCCTGCTAAGGGAATG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400042145
PEP Infomation

pacid=37454578 transcript=PGSC0003DMT400062594 locus=PGSC0003DMG400024356 ID=PGSC0003DMT400062594.v4.03 annot-version=v4.03
Sequence

MADRNNSSAITVTAAVKPIWAKQAEEAKLKSEAEKDAAAKAAFDATFKNVEASVTAAAAA
SDSDLDDEEYEQKRLAEKPIGPVDPIKCTAAGTGIAGGTACAPSTFTVVTKDSDGRKVPH
GGATVKIRVSPGVGVGGSDLEGIVKDMGDGTYTVSYIVQKRGNYMVNVECNGKPIMGSPF
PVFFSTGSTTGGLLGIVPSTTFPNMVNQNMPNMPNYSGSVSGAVPGLLGMIPGIVPGASG
GVVLPGIGASIGEVCREYLYGRCAKTDCKFNHPPHNLLMTALAATTSMGTLSQVPMAPSA
AAMAAAQAIVAAQALQAHAAQAQAQSGKDSSGDKDRKAESLKRTLQVSNLSPLLTVDQLK
QLFGFCGAIIDCSITESKHFAYIEYSKPEEATAALALNNIEVGGRPLNVEMAKQLPPKAA
VLNSSMGSSSLPLMMQQAVAMQQMQFQQALLMQQAMTEQQAANRAATMKTATDLAAARAA
EISKMLKANGLVSEDKETDDKAKSPSPSRARSRSRSPSKSRSRSRSPISYRRRRRSRSFS
PPRRSRDYRSRSPVRSRRYSGYEDERRPYRDVRYANERSRRRDFVRFYDRRSPVSRRNRS
RSTSPRTRKSYRDDSGSPKHRRESPALKTSRASRHESLSPEHRRKSRSSPKDGERKSKYS
RRSRSKSAEVRDQSDDKLEGSRGEKSRQKDQRRSASPQVDEDAQKKMSPEVVEESKSKQR
RTSRSRSPEEKHLSSRSREEKRKHHARRRSRSRSKSPEEKVHSSDKLDRNKGDKPKHRSR
RHSKSRSRSPEERHHSSAKLERSRKEKSKSRSKKRSRSRSVDDKQHGTKQSASRSDSRRS
KLRARSRSNSSESRHGSGQDETIKDEVRGHRGHQRRSRQDDHNHGTTEISLMEEDPAKGM
*

Transcript Sequence

Transcript ID

PGSC0003DMT400062594
Transcript Infomation

pacid=37454578 locus=PGSC0003DMG400024356 ID=PGSC0003DMT400062594.v4.03 annot-version=v4.03
Sequence

ATGGCTGATCGGAACAATTCATCGGCGATTACAGTGACGGCAGCGGTGAAGCCGATATGG
GCGAAGCAAGCAGAAGAAGCGAAGCTTAAGAGCGAAGCAGAGAAAGATGCGGCTGCGAAA
GCTGCTTTCGATGCTACGTTTAAGAACGTCGAAGCTTCAGTCACTGCAGCCGCAGCCGCA
TCCGACAGTGACTTAGACGATGAGGAATATGAGCAGAAGAGGCTTGCGGAGAAGCCGATC
GGTCCGGTTGACCCTATAAAATGTACGGCCGCTGGCACTGGAATCGCCGGTGGAACAGCG
TGTGCTCCGTCAACTTTCACCGTTGTGACGAAGGATTCTGATGGTCGTAAGGTACCACAT
GGTGGGGCGACCGTTAAGATTAGAGTTTCACCTGGTGTTGGAGTTGGAGGATCAGATTTG
GAAGGAATTGTGAAGGATATGGGTGATGGGACATACACAGTGAGTTATATTGTTCAGAAG
AGAGGAAATTATATGGTGAATGTTGAATGTAATGGAAAGCCTATCATGGGTAGTCCTTTC
CCTGTTTTCTTCAGCACAGGCAGTACGACTGGTGGGCTATTGGGTATAGTACCGTCAACC
ACATTTCCAAATATGGTCAACCAGAACATGCCTAATATGCCAAACTATTCTGGTTCTGTA
TCTGGGGCAGTCCCAGGATTGCTTGGGATGATACCAGGTATTGTTCCTGGAGCTTCTGGA
GGTGTAGTTTTACCTGGAATTGGAGCATCTATTGGGGAAGTTTGCCGAGAGTACCTTTAT
GGACGATGTGCAAAAACTGATTGCAAATTCAATCACCCCCCTCACAATCTTCTAATGACT
GCTCTAGCTGCAACCACCAGTATGGGAACACTTAGTCAAGTGCCCATGGCACCTTCTGCG
GCTGCTATGGCTGCTGCTCAGGCAATTGTTGCTGCACAAGCTCTTCAAGCGCATGCTGCT
CAGGCACAAGCACAGTCTGGAAAAGATTCGTCTGGTGACAAAGATAGAAAGGCCGAATCC
CTTAAAAGAACTTTGCAAGTCAGCAATCTCAGCCCACTTCTGACAGTGGATCAGTTGAAA
CAGCTGTTTGGTTTCTGTGGTGCAATCATTGATTGTAGCATTACTGAATCCAAACATTTT
GCTTACATCGAATACTCAAAACCCGAAGAAGCAACTGCTGCTTTAGCATTGAACAATATA
GAAGTTGGTGGTCGCCCCTTAAATGTTGAAATGGCAAAACAACTTCCTCCAAAGGCAGCT
GTCTTAAATTCATCAATGGGCTCTTCTTCTTTGCCCTTGATGATGCAGCAAGCAGTAGCA
ATGCAGCAGATGCAGTTCCAGCAAGCCCTATTAATGCAGCAAGCTATGACTGAACAACAA
GCTGCTAATCGAGCTGCAACCATGAAAACTGCTACAGATTTGGCTGCCGCAAGAGCTGCA
GAAATAAGCAAGATGTTGAAAGCGAATGGCCTGGTTTCTGAAGATAAGGAAACTGATGAC
AAAGCTAAGTCACCTTCTCCCAGTCGTGCTAGGTCAAGATCCAGGTCGCCATCCAAATCT
CGATCCAGATCAAGATCTCCAATAAGTTATAGGCGAAGGCGGAGATCCCGTTCTTTCTCT
CCTCCACGGAGATCAAGAGATTATAGATCCAGGTCACCTGTGAGATCCCGGCGCTATTCA
GGCTACGAAGATGAAAGGCGGCCATATAGGGATGTTAGATATGCTAATGAAAGAAGTCGA
AGACGGGATTTTGTTAGATTCTATGATCGTCGTTCTCCTGTTTCAAGGAGAAACAGAAGT
AGAAGCACAAGTCCCCGAACTAGAAAATCTTACCGTGACGATTCAGGCTCACCAAAACAC
CGCCGAGAAAGTCCAGCACTTAAGACAAGTAGAGCTTCTCGCCATGAGTCACTATCGCCT
GAACATAGACGAAAAAGTAGGTCATCCCCAAAAGATGGTGAAAGAAAATCAAAATATAGC
AGGCGCTCGAGATCAAAGTCTGCTGAAGTTAGGGACCAGTCTGATGATAAGCTAGAAGGA
AGCAGGGGTGAGAAATCCAGGCAGAAGGATCAAAGAAGGTCAGCATCACCACAGGTTGAT
GAAGATGCACAGAAGAAAATGTCACCGGAAGTTGTGGAAGAAAGCAAGTCAAAGCAGAGA
AGAACCTCCAGGTCCAGATCTCCAGAAGAGAAGCATCTTTCTAGCAGAAGCAGAGAAGAG
AAAAGAAAGCATCATGCTAGAAGGCGCTCCAGGTCAAGGTCCAAATCTCCTGAAGAGAAA
GTTCACTCAAGTGATAAATTAGACAGAAATAAAGGAGATAAACCTAAGCATCGAAGTAGA
AGGCACTCAAAGTCAAGGTCCAGATCTCCTGAAGAAAGACATCATTCAAGTGCTAAATTG
GAAAGGAGCAGAAAAGAGAAATCAAAGAGTCGAAGTAAAAAGCGCTCCAGGTCAAGATCT
GTCGATGATAAGCAGCACGGAACTAAACAGTCAGCAAGCCGTTCTGATAGCCGACGATCA
AAGCTCAGGGCACGTTCTAGATCAAATTCTTCTGAAAGTAGGCATGGATCAGGTCAAGAT
GAAACCATAAAGGATGAAGTGAGAGGTCATAGGGGTCACCAGAGAAGATCTAGGCAGGAT
GACCATAATCATGGAACAACTGAGATTAGCTTGATGGAAGAAGATCCTGCTAAGGGAATG
TAA