Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062562
CDS Infomation

pacid=37458717 polypeptide=PGSC0003DMP400042123 locus=PGSC0003DMG400024344 ID=PGSC0003DMT400062562.v4.03 annot-version=v4.03
Sequence

ATGGAGATGAAAGGGAACTCAAATGATGTTCTTCACATAGTTATGTTCCCTTTTTTTGCA
TTTGGACATATTAGTCCATTTGTTCAGCTTTCTAACAAGCTCTCCTTTCATGGTGTTAAA
GTTTCATTTTTCACAGCATCTGGCAATGCAAGTAGAGTGAAATCTATGTTGAATTCTGCT
CCAACTACTTGTATTGTCCCTCTCACTCTTCCACAAGTTGAAGGTCTACCTCCTGGTGCT
GAAAGTACTGCTGAATTGACACCAATAACTGCTGAACTTCTCAAAGTTGCTTTAGACCAA
ATGCAACCACAAATCAAGTCTTTACTTTCTAATCTCAAACCCCATTTTGTTCTTTTTGAT
TTTGCTCAAGATTGGCTCCCTAAAATGGCTGATGAATTAGGGATCAAATCTGTTTATTAC
TCTGTTTTTGTTGCACTTTCTACTGCTTTTCTTACTTGCCCTGCCAGAGTCCCTCAACCC
AAAAATTATCCGTCTCTTGAAGACATGAAAAAACCTCCACCTGGATTTCCTCACACCTCT
GTAACCTCAGTCAAAACCTTTGAAGCTCAAGATTTTCTATACATTTTCAAGAGCTTCCAT
GGAGGTCCTACAGTATACGACCGCGTACTCTCAGGTCTTAAGGGGTGCTCTGCTATACTA
GCGAAAACTTGTTCTCAAATGGAAGGACCTTATATCGAATACGTAAAATCACAATTCAAA
AAACCTGTTTTTCTAGTTGGACCAGTAGTACCCGATCCACCTTCAGGGGAATTAGAAGAG
AGATGGGGTAATTGGCTAAACAAATTTGAATCAGGAACAGTTATTTACTCTTCTTTTGGA
AGCGAAACATTCTTGACTGATGATCAGATAAAAGAACTAGCTTTAGGTTTGGAAGAAACA
GGGCTGCCTTTCTTTCTTGTCTTGAATTTTCCAGCCAATATTGATGTTTCAGCTGAACTA
AACAGAGTTTTACCAAAAGGGTTTATGGAGAGAGTGAAAGAAAGGGGAATTGTTCATTCA
GGTTGGGTGCAGCAACAACACATACTTGCACATTCTAGTGTTGGTTGTTATGTATGTCAT
GCAGGATTCAGTTCAGTAATAGAGGCATTAGTGAATGATTGTCAAGTTGTTATGTTGCCA
CAGAAAGGTGATCAGTTCTTGAATGCAAAGCTGGTGAGTGGGGATATGAAAGCTGGGGTG
GAGGTGAATAGGAGAGATGAAGATGGTTATTTTGGTAAACAAGATATTAAGGAAGCTGTG
GAGATGGTGATGATGGAGGTTGATAAGGAGCCAGGTAAATTTTTTAGGGAAAATCAGAAG
AAATGGAAGGAGTTTCTGTTGAATACGGATATACAATGCAAGTTTATTGAGGATTTAGTT
TATGAAATGAAGGCCATGGTTAAGATCTCAAGTAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042123
PEP Infomation

pacid=37458717 transcript=PGSC0003DMT400062562 locus=PGSC0003DMG400024344 ID=PGSC0003DMT400062562.v4.03 annot-version=v4.03
Sequence

MEMKGNSNDVLHIVMFPFFAFGHISPFVQLSNKLSFHGVKVSFFTASGNASRVKSMLNSA
PTTCIVPLTLPQVEGLPPGAESTAELTPITAELLKVALDQMQPQIKSLLSNLKPHFVLFD
FAQDWLPKMADELGIKSVYYSVFVALSTAFLTCPARVPQPKNYPSLEDMKKPPPGFPHTS
VTSVKTFEAQDFLYIFKSFHGGPTVYDRVLSGLKGCSAILAKTCSQMEGPYIEYVKSQFK
KPVFLVGPVVPDPPSGELEERWGNWLNKFESGTVIYSSFGSETFLTDDQIKELALGLEET
GLPFFLVLNFPANIDVSAELNRVLPKGFMERVKERGIVHSGWVQQQHILAHSSVGCYVCH
AGFSSVIEALVNDCQVVMLPQKGDQFLNAKLVSGDMKAGVEVNRRDEDGYFGKQDIKEAV
EMVMMEVDKEPGKFFRENQKKWKEFLLNTDIQCKFIEDLVYEMKAMVKISSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400062562
Transcript Infomation

pacid=37458717 locus=PGSC0003DMG400024344 ID=PGSC0003DMT400062562.v4.03 annot-version=v4.03
Sequence

ATGGAGATGAAAGGGAACTCAAATGATGTTCTTCACATAGTTATGTTCCCTTTTTTTGCA
TTTGGACATATTAGTCCATTTGTTCAGCTTTCTAACAAGCTCTCCTTTCATGGTGTTAAA
GTTTCATTTTTCACAGCATCTGGCAATGCAAGTAGAGTGAAATCTATGTTGAATTCTGCT
CCAACTACTTGTATTGTCCCTCTCACTCTTCCACAAGTTGAAGGTCTACCTCCTGGTGCT
GAAAGTACTGCTGAATTGACACCAATAACTGCTGAACTTCTCAAAGTTGCTTTAGACCAA
ATGCAACCACAAATCAAGTCTTTACTTTCTAATCTCAAACCCCATTTTGTTCTTTTTGAT
TTTGCTCAAGATTGGCTCCCTAAAATGGCTGATGAATTAGGGATCAAATCTGTTTATTAC
TCTGTTTTTGTTGCACTTTCTACTGCTTTTCTTACTTGCCCTGCCAGAGTCCCTCAACCC
AAAAATTATCCGTCTCTTGAAGACATGAAAAAACCTCCACCTGGATTTCCTCACACCTCT
GTAACCTCAGTCAAAACCTTTGAAGCTCAAGATTTTCTATACATTTTCAAGAGCTTCCAT
GGAGGTCCTACAGTATACGACCGCGTACTCTCAGGTCTTAAGGGGTGCTCTGCTATACTA
GCGAAAACTTGTTCTCAAATGGAAGGACCTTATATCGAATACGTAAAATCACAATTCAAA
AAACCTGTTTTTCTAGTTGGACCAGTAGTACCCGATCCACCTTCAGGGGAATTAGAAGAG
AGATGGGGTAATTGGCTAAACAAATTTGAATCAGGAACAGTTATTTACTCTTCTTTTGGA
AGCGAAACATTCTTGACTGATGATCAGATAAAAGAACTAGCTTTAGGTTTGGAAGAAACA
GGGCTGCCTTTCTTTCTTGTCTTGAATTTTCCAGCCAATATTGATGTTTCAGCTGAACTA
AACAGAGTTTTACCAAAAGGGTTTATGGAGAGAGTGAAAGAAAGGGGAATTGTTCATTCA
GGTTGGGTGCAGCAACAACACATACTTGCACATTCTAGTGTTGGTTGTTATGTATGTCAT
GCAGGATTCAGTTCAGTAATAGAGGCATTAGTGAATGATTGTCAAGTTGTTATGTTGCCA
CAGAAAGGTGATCAGTTCTTGAATGCAAAGCTGGTGAGTGGGGATATGAAAGCTGGGGTG
GAGGTGAATAGGAGAGATGAAGATGGTTATTTTGGTAAACAAGATATTAAGGAAGCTGTG
GAGATGGTGATGATGGAGGTTGATAAGGAGCCAGGTAAATTTTTTAGGGAAAATCAGAAG
AAATGGAAGGAGTTTCTGTTGAATACGGATATACAATGCAAGTTTATTGAGGATTTAGTT
TATGAAATGAAGGCCATGGTTAAGATCTCAAGTAACTAG