Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062560
CDS Infomation

pacid=37443436 polypeptide=PGSC0003DMP400042122 locus=PGSC0003DMG400024342 ID=PGSC0003DMT400062560.v4.03 annot-version=v4.03
Sequence

ATGGCAACTGGGTTTTGTAGCAGCAACACCTGTCTTGTGTTGAATCGACGGAGTGACTCA
ATTTTCCGTCACTTTCCCTCTTCTTATCCTACTTCTGGGTCTACCCGAAAAAGGTCTTCA
ATCAGATGTCAGTCCACAGGCACAGATGAACCAAAAACAAAGATGAGTTTATTTGATAAT
GCTAGCAACCTCCTCACTAATCTGTTGAGTGGGGGGAAAATTGGGTCAATGCCTATCGCA
GAAGGGGCAGTGACTGACCTTTTCGACCGCCCACTTTTTTTCTCATTGTATGATTGGTCC
CTAAAGTATGGATCAGTCTATAAACTTGCTTTTGGACCAAAGGCATTTGTTGTTGTATCA
GATCCCATTGTTGCTCGGCATATTCTTCGCGAGAATGCATTTTCTTATGACAAGGGGGTC
CTTGCTGAAATCTTGGAACCAATCATGGGAAAAGGGCTGATACCTGCTGACCTTGATACT
TGGAAACAGAGGAGAAGAGTTATTGCCCCTGGATTCCACTCATCATACCTAGAAGCTATG
GCTAAAGTATTCACTGAATGTGCTGATAGAACAATGTTGAAATTTGATAAGCTTATTGAA
CAAGAAGAGTCAGGAGGAGGGAAGCTAATTGAGTTGGATCTCGAGACAGAATTCTCAAAT
TTAGCACTAGATATTATTGGGCTTGGTGTTTTCAATTATGACTTCGGTTCCATCACAAAA
GAGTCTCCAGTTATTAAGGCTGTGTATGGTACACTTTTTGAAGCTGAGCATCGTTCTACC
TTCTACATCCCCTATTGGAATATCCCTCTGGCAAGATGGTTAGTTCCTCGGCAGCGGAAG
TTCCAAAGTGATCTGAAGGTCATTAATGATTGCCTTGATGGACTTATACAAAATGCAAAA
GAGACCAGGCAGGAAACAGATGTTGAGAAACTACAGCAAAGGGACTACTTAAATCTTAAG
GATGCAAGTCTTTTGCGGTTTTTAGTTGATATGAGGGGTGTTGATGTTGATGATCGTCAG
CTACGAGATGACTTGATGACGATGCTGATTGCTGGACATGAAACAACTGCTGCCGTTCTT
ACGTGGGCTGTTTTCCTCCTTGCACAACATCCAGTCAAAATGAAGAAAGCGCAGTCAGAG
ATTGATGCAGTGCTTGGTCAGGGAAGGACGACCTTCGAGTCTCTTAAAAAATTAGAATAT
TTGCGACTTATTGTTGTGGAGTCATTGCGCTTGTATCCACAACCTCCATTGCTTATTAGA
CGTTCCCTTACATCAGATATACTACCAGGGGGCTATAATGGCGACAAGAATGGATACGAA
ATTCCAGCTGGCACTGATGTTTTCCTATCTGTATATAATCTTCATAGGTCACCATATTTC
TGGGACAAACCTAATGAATTTGAACCCGAGAGGTTCCTAGTACAAAAGGAAAGTCAAGGC
ATTGAAGGCTGGGCAGGTTTTGATCCATCTAGAAGTCCTGGAGCATTATATCCAAATGAG
ATTATATCAGACTTTGCTTTCTTGCCTTTTGGTGGGGGACCAAGAAAATGTGTTGGTGAC
CAATTTGCACTTATGGAGTCAACAATAGCATTGGCAATGTTGTTGCAAAAGTTTGATGTG
GAACTGAAAGGGTCTCCTGAGGATGTAGAACTCGTTACGGGGGCAACTATTCACACGAAA
ACTGGCTTGTGGTGTAAATTAAAGAAGAGATCAAATGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042122
PEP Infomation

pacid=37443436 transcript=PGSC0003DMT400062560 locus=PGSC0003DMG400024342 ID=PGSC0003DMT400062560.v4.03 annot-version=v4.03
Sequence

MATGFCSSNTCLVLNRRSDSIFRHFPSSYPTSGSTRKRSSIRCQSTGTDEPKTKMSLFDN
ASNLLTNLLSGGKIGSMPIAEGAVTDLFDRPLFFSLYDWSLKYGSVYKLAFGPKAFVVVS
DPIVARHILRENAFSYDKGVLAEILEPIMGKGLIPADLDTWKQRRRVIAPGFHSSYLEAM
AKVFTECADRTMLKFDKLIEQEESGGGKLIELDLETEFSNLALDIIGLGVFNYDFGSITK
ESPVIKAVYGTLFEAEHRSTFYIPYWNIPLARWLVPRQRKFQSDLKVINDCLDGLIQNAK
ETRQETDVEKLQQRDYLNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVL
TWAVFLLAQHPVKMKKAQSEIDAVLGQGRTTFESLKKLEYLRLIVVESLRLYPQPPLLIR
RSLTSDILPGGYNGDKNGYEIPAGTDVFLSVYNLHRSPYFWDKPNEFEPERFLVQKESQG
IEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDV
ELKGSPEDVELVTGATIHTKTGLWCKLKKRSNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400062560
Transcript Infomation

pacid=37443436 locus=PGSC0003DMG400024342 ID=PGSC0003DMT400062560.v4.03 annot-version=v4.03
Sequence

ATGGCAACTGGGTTTTGTAGCAGCAACACCTGTCTTGTGTTGAATCGACGGAGTGACTCA
ATTTTCCGTCACTTTCCCTCTTCTTATCCTACTTCTGGGTCTACCCGAAAAAGGTCTTCA
ATCAGATGTCAGTCCACAGGCACAGATGAACCAAAAACAAAGATGAGTTTATTTGATAAT
GCTAGCAACCTCCTCACTAATCTGTTGAGTGGGGGGAAAATTGGGTCAATGCCTATCGCA
GAAGGGGCAGTGACTGACCTTTTCGACCGCCCACTTTTTTTCTCATTGTATGATTGGTCC
CTAAAGTATGGATCAGTCTATAAACTTGCTTTTGGACCAAAGGCATTTGTTGTTGTATCA
GATCCCATTGTTGCTCGGCATATTCTTCGCGAGAATGCATTTTCTTATGACAAGGGGGTC
CTTGCTGAAATCTTGGAACCAATCATGGGAAAAGGGCTGATACCTGCTGACCTTGATACT
TGGAAACAGAGGAGAAGAGTTATTGCCCCTGGATTCCACTCATCATACCTAGAAGCTATG
GCTAAAGTATTCACTGAATGTGCTGATAGAACAATGTTGAAATTTGATAAGCTTATTGAA
CAAGAAGAGTCAGGAGGAGGGAAGCTAATTGAGTTGGATCTCGAGACAGAATTCTCAAAT
TTAGCACTAGATATTATTGGGCTTGGTGTTTTCAATTATGACTTCGGTTCCATCACAAAA
GAGTCTCCAGTTATTAAGGCTGTGTATGGTACACTTTTTGAAGCTGAGCATCGTTCTACC
TTCTACATCCCCTATTGGAATATCCCTCTGGCAAGATGGTTAGTTCCTCGGCAGCGGAAG
TTCCAAAGTGATCTGAAGGTCATTAATGATTGCCTTGATGGACTTATACAAAATGCAAAA
GAGACCAGGCAGGAAACAGATGTTGAGAAACTACAGCAAAGGGACTACTTAAATCTTAAG
GATGCAAGTCTTTTGCGGTTTTTAGTTGATATGAGGGGTGTTGATGTTGATGATCGTCAG
CTACGAGATGACTTGATGACGATGCTGATTGCTGGACATGAAACAACTGCTGCCGTTCTT
ACGTGGGCTGTTTTCCTCCTTGCACAACATCCAGTCAAAATGAAGAAAGCGCAGTCAGAG
ATTGATGCAGTGCTTGGTCAGGGAAGGACGACCTTCGAGTCTCTTAAAAAATTAGAATAT
TTGCGACTTATTGTTGTGGAGTCATTGCGCTTGTATCCACAACCTCCATTGCTTATTAGA
CGTTCCCTTACATCAGATATACTACCAGGGGGCTATAATGGCGACAAGAATGGATACGAA
ATTCCAGCTGGCACTGATGTTTTCCTATCTGTATATAATCTTCATAGGTCACCATATTTC
TGGGACAAACCTAATGAATTTGAACCCGAGAGGTTCCTAGTACAAAAGGAAAGTCAAGGC
ATTGAAGGCTGGGCAGGTTTTGATCCATCTAGAAGTCCTGGAGCATTATATCCAAATGAG
ATTATATCAGACTTTGCTTTCTTGCCTTTTGGTGGGGGACCAAGAAAATGTGTTGGTGAC
CAATTTGCACTTATGGAGTCAACAATAGCATTGGCAATGTTGTTGCAAAAGTTTGATGTG
GAACTGAAAGGGTCTCCTGAGGATGTAGAACTCGTTACGGGGGCAACTATTCACACGAAA
ACTGGCTTGTGGTGTAAATTAAAGAAGAGATCAAATGTTTGA