Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062512
CDS Infomation

pacid=37432443 polypeptide=PGSC0003DMP400042094 locus=PGSC0003DMG400024327 ID=PGSC0003DMT400062512.v4.03 annot-version=v4.03
Sequence

ATGGGAGAATTTGGAAATGAGGTAGCAAAGTCTAATTCTAGTATTATTTTTGAGAAAAAG
AAGAATGGAATGAACTCCAAGATTTCTGCATCTCCCACCATGGAATCTCATCAAGCTCAT
CTTATTTCATCTCGCTGCACTACCTGCTGGGGAAGTATGAGTAGTTGCCAAATTGTTCGT
TCAAGAACAAAACTAATGAATATTTTGATTGAGAGGAAAAAACCACAAGAGGTCCACTCA
ATTTTTCAGGGTCTTACAGAAGATGGACATCGGCCAACTCTTGTCACATATACAACTGTT
TTGGCTGCATTTACTCTCCAGAAACGTTTCAAGTCAATACCATTGCTTCTTTCCAAATTG
GAGCAAGATGGACTAAAACCTGACTCCATATTCTTCAATGCCATGATAAATGCTTTTTCT
GAATCTGGAAATCTTAAGGAGGCAATGAAAGTGTTCCACAAAATGAGGGACAAACAATGT
AAGCCCACAACCAGTACTTTTAATACATTAATTAAAGGATTTGGAATTATTGGTAAGCCT
GAAGAATCTCTGAAACTTCTGGAAATTATGTCTCTTCAAGAGAATGTGAAACCTAATGAC
CGAACATATAATATTCTGGTCCGGGCTTGGTGTAACAAGAGCAAAATTGCAGAAGCCTGG
AATGTGGTTCACAGAATGGTTTCAGCTGGTGTCAAACCTGATGTTGTTACTTACAATACT
ATAGCAACGGCTTATGCTAGAAACAAGGAGCCTGGTAGAGCTGAAGCAATGATTTTTCAA
ATGCAAAATCACAAAGTGGCACCAAATCATCGAACATGTGGTATTATCGTGGACGGGTAC
TGTAAAGAGGGAAATATGACAGAAGCATTGAGGTTTGTTTACAGGATGAAGGATCTTGGT
GTACTTCCTAATCTAGTAATATTCAACTCTCTCATCAAAGGCTTTCTCGATATCACTGAT
ACTAGTGGTGTTGATGAGACACTTACATTGATGGAAGAGTTTGGGGTGAAACCAGATGTG
GTAACATTTAGTACTATCATGAATGCATGGAGTTCAGCTGGACTTATGGATAAATGCCAA
GAGATATTTGATGACATGATTAAGGCCAGTATAGAACCTGATAGCCACGCATTCAGCATT
CTAGCTAAAGGTTATGTGCGTGCTGGAGAACCTGAAAAAGCTGAAGCCCTGTTGAAAGTT
ATGGCTTCATCGGGTGTACATCCAAATGTCGTAATGTTTACAACAATCATCAGTGGATGG
TGCAGTGCTGGACAAATGGAGTATGCTATGAGGGTATTTGAAAGGATGTGCAAAAGGGAT
GTATCTCCTAACTTGAAAACCTTTGAGACCCTCATATGGGGTTATGGAGAAGCAAAACAA
CCATGGAAGGCTGAAGAGTTCCTCCAAGTTATGGACAAGATGGGAGTAACTCACACGAAG
AATACTCTTCGACTTGTTTCAGATGCATGGCGAGCAATTGGTTTCCTTAACGAGGCCAAG
AAAATCTCAGGGGATGTGGAATATGATGATAGCGAATTCTTGAATGCTCTGGAGGATAAG
CAACCAGGGGACAACAACTTTGAACGAGTTTATCCTAATGATTCTCTCTCAAGCCTTAAG
CAAGTAAGCAACAAAAATGGGTCGAGCCCTGTCAATAAAAGAAGCCAAATAGTGCTGAGC
AGATATAGTTCTTTTGCCGGAAGCATAAATGTGGCAACTAAATCAATAATGCTTCCCCAT
ACTTGTGGATTCAAGGTAAAATCTTTGATGATATTTGACAAGCAGTGTCAAGTGCAGATA
GGAATATATGGTTTTGTAAATTCATGTAGAATGGTGGCCTTAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042094
PEP Infomation

pacid=37432443 transcript=PGSC0003DMT400062512 locus=PGSC0003DMG400024327 ID=PGSC0003DMT400062512.v4.03 annot-version=v4.03
Sequence

MGEFGNEVAKSNSSIIFEKKKNGMNSKISASPTMESHQAHLISSRCTTCWGSMSSCQIVR
SRTKLMNILIERKKPQEVHSIFQGLTEDGHRPTLVTYTTVLAAFTLQKRFKSIPLLLSKL
EQDGLKPDSIFFNAMINAFSESGNLKEAMKVFHKMRDKQCKPTTSTFNTLIKGFGIIGKP
EESLKLLEIMSLQENVKPNDRTYNILVRAWCNKSKIAEAWNVVHRMVSAGVKPDVVTYNT
IATAYARNKEPGRAEAMIFQMQNHKVAPNHRTCGIIVDGYCKEGNMTEALRFVYRMKDLG
VLPNLVIFNSLIKGFLDITDTSGVDETLTLMEEFGVKPDVVTFSTIMNAWSSAGLMDKCQ
EIFDDMIKASIEPDSHAFSILAKGYVRAGEPEKAEALLKVMASSGVHPNVVMFTTIISGW
CSAGQMEYAMRVFERMCKRDVSPNLKTFETLIWGYGEAKQPWKAEEFLQVMDKMGVTHTK
NTLRLVSDAWRAIGFLNEAKKISGDVEYDDSEFLNALEDKQPGDNNFERVYPNDSLSSLK
QVSNKNGSSPVNKRSQIVLSRYSSFAGSINVATKSIMLPHTCGFKVKSLMIFDKQCQVQI
GIYGFVNSCRMVALN*

Transcript Sequence

Transcript ID

PGSC0003DMT400062512
Transcript Infomation

pacid=37432443 locus=PGSC0003DMG400024327 ID=PGSC0003DMT400062512.v4.03 annot-version=v4.03
Sequence

ATGGGAGAATTTGGAAATGAGGTAGCAAAGTCTAATTCTAGTATTATTTTTGAGAAAAAG
AAGAATGGAATGAACTCCAAGATTTCTGCATCTCCCACCATGGAATCTCATCAAGCTCAT
CTTATTTCATCTCGCTGCACTACCTGCTGGGGAAGTATGAGTAGTTGCCAAATTGTTCGT
TCAAGAACAAAACTAATGAATATTTTGATTGAGAGGAAAAAACCACAAGAGGTCCACTCA
ATTTTTCAGGGTCTTACAGAAGATGGACATCGGCCAACTCTTGTCACATATACAACTGTT
TTGGCTGCATTTACTCTCCAGAAACGTTTCAAGTCAATACCATTGCTTCTTTCCAAATTG
GAGCAAGATGGACTAAAACCTGACTCCATATTCTTCAATGCCATGATAAATGCTTTTTCT
GAATCTGGAAATCTTAAGGAGGCAATGAAAGTGTTCCACAAAATGAGGGACAAACAATGT
AAGCCCACAACCAGTACTTTTAATACATTAATTAAAGGATTTGGAATTATTGGTAAGCCT
GAAGAATCTCTGAAACTTCTGGAAATTATGTCTCTTCAAGAGAATGTGAAACCTAATGAC
CGAACATATAATATTCTGGTCCGGGCTTGGTGTAACAAGAGCAAAATTGCAGAAGCCTGG
AATGTGGTTCACAGAATGGTTTCAGCTGGTGTCAAACCTGATGTTGTTACTTACAATACT
ATAGCAACGGCTTATGCTAGAAACAAGGAGCCTGGTAGAGCTGAAGCAATGATTTTTCAA
ATGCAAAATCACAAAGTGGCACCAAATCATCGAACATGTGGTATTATCGTGGACGGGTAC
TGTAAAGAGGGAAATATGACAGAAGCATTGAGGTTTGTTTACAGGATGAAGGATCTTGGT
GTACTTCCTAATCTAGTAATATTCAACTCTCTCATCAAAGGCTTTCTCGATATCACTGAT
ACTAGTGGTGTTGATGAGACACTTACATTGATGGAAGAGTTTGGGGTGAAACCAGATGTG
GTAACATTTAGTACTATCATGAATGCATGGAGTTCAGCTGGACTTATGGATAAATGCCAA
GAGATATTTGATGACATGATTAAGGCCAGTATAGAACCTGATAGCCACGCATTCAGCATT
CTAGCTAAAGGTTATGTGCGTGCTGGAGAACCTGAAAAAGCTGAAGCCCTGTTGAAAGTT
ATGGCTTCATCGGGTGTACATCCAAATGTCGTAATGTTTACAACAATCATCAGTGGATGG
TGCAGTGCTGGACAAATGGAGTATGCTATGAGGGTATTTGAAAGGATGTGCAAAAGGGAT
GTATCTCCTAACTTGAAAACCTTTGAGACCCTCATATGGGGTTATGGAGAAGCAAAACAA
CCATGGAAGGCTGAAGAGTTCCTCCAAGTTATGGACAAGATGGGAGTAACTCACACGAAG
AATACTCTTCGACTTGTTTCAGATGCATGGCGAGCAATTGGTTTCCTTAACGAGGCCAAG
AAAATCTCAGGGGATGTGGAATATGATGATAGCGAATTCTTGAATGCTCTGGAGGATAAG
CAACCAGGGGACAACAACTTTGAACGAGTTTATCCTAATGATTCTCTCTCAAGCCTTAAG
CAAGTAAGCAACAAAAATGGGTCGAGCCCTGTCAATAAAAGAAGCCAAATAGTGCTGAGC
AGATATAGTTCTTTTGCCGGAAGCATAAATGTGGCAACTAAATCAATAATGCTTCCCCAT
ACTTGTGGATTCAAGGTAAAATCTTTGATGATATTTGACAAGCAGTGTCAAGTGCAGATA
GGAATATATGGTTTTGTAAATTCATGTAGAATGGTGGCCTTAAATTAA