Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062489
CDS Infomation

pacid=37451203 polypeptide=PGSC0003DMP400042077 locus=PGSC0003DMG400024320 ID=PGSC0003DMT400062489.v4.03 annot-version=v4.03
Sequence

ATGGAGGTGGTGGAAGAGAAGTGTGTGGACTCTCAGTTTTGGCATGCCTGTACAGGAAGT
ATGGTGCAAATTCCTCCGGTGAACTCTAAGGTGTTCTATTTCCCACAAGGTCATGCTGAG
CATACATATACAAATGTTGATTTCACTCTACTGCCGAGAATTCCTGCGATGATTCTATGC
AGAGTTGATACTGTGAAGTTTTTAGCTGACACTGAAACTGATGAAGTTTATGCGAAAATT
AGGCTTATTCCGGTTGAAGACTTTGAAGATGACAGTGTGGTTGAAAAAACTGAGAAGCCT
ACTTTCTTTGCTAAGACATTGACTCAATCAGATGCGAATAATGGGGGTGGTTTTTCAGCT
CCGAGGTACTGTGCAGAGACAATTTTCCCCAAATTGGATCTCAAAGCTGATCCGCCTGTC
CAAGTAGTGAAGGCAAAGGATGTTCATGGTGAAACCTGGAATTTTAGGCACATTTATAGG
GGCACACCAAGGAGGCATTTGTTGACAAGTGGTTGGAGTGCATTTGTCAATAAGAAGAAG
CTGGTTGCAGGGGACTCTGTTGTGTTTCTCAAGGCAGAGAATGATGAGCTTTGTGTTGGA
ATTCGCAGGGTAAAGCGGGGTGGTATTGGTGGGCCGGAAACACAATCAGGGTGGAACTCA
ACTACTGGTAGTTATGGTGGATTTTTGACGGAAGACGAGAACAGTATGATTAGAAGTTGT
AGTAATGAAAATCTGATTTCTTATGGTGGGAGATTTAGAGATAAGGGAAAAGTGAGCCCT
GATGAAATTGTTAGGGATTCATATCTCGCTGCTAGTGGCCAGCCTTTTGAAATTGTTTAC
TACCCTGGTGCAAGCACTCCAGAATATTGCGTTAGGGCCTCTTCTGTGCATGCTGCAATG
AGTGTTCAATGGTGCTCAGGGATGAGGTTCAAAATGGCTTTTGAAACTGAGGGTTCTTCT
CGGATCAGCTGGTTCATGGGAAGTATATCTTCGGTTCAGGTTGCTGACCCCATCCGCTGG
CCTCATTCACCGTGGCGGCTTCTTCAGGTGACATGGGATGAACCAGATTTGTTGCAGAAT
GTAAAATCTGTAAACCCATGGCTTGTCGAATTGGTCTCTAATATGCCCGACATTAACTTG
TCACACTTCTCACCACCAAGGAAAAGGTTGTGTTTGCCACAAGAGTTAGCACTTGACCGC
CAATTTCCATTACCTTCATTTTCAGGCAACCCCCTCAGGTCTAGTAGTCCTTTTTGTTAT
CCGTCTGACAACAGTACTGCAGGCATACAGGGAGCCAGGCATGTTCAATTTGGAGTACCT
TTATTAGATCTCCACCGTAGCGAAAAGTTGCAGTTAGGTGTGCTACAACCACCCGCTTCC
CAACAAGTTGATGCTGATTCTGAAAGTCCTATTGGCACAAGTAAGGTCCAAAAAGAGAGC
AATGAAAATGTATCTTGCTTGCTTACCATGGGTACCTCTAGTCAGATGGAGGAAGCTGAT
AATGTGAAGACACCTCGGTTTTTACTCTTTGGCCAACCAATTCTCACTGAGCAGCAAATG
TCAAGTGTCCTCTCTACTCATGCTCCTCCACAAGTCCAAGCAGAAAGAGACTCCGATTGG
GCACAATTGAAAACTGAAAGAATTTCTCAAGGCTGGAAATGCCTTTCAGAAAGTCTATCA
AGCACTACATTTCTTTGGAATAAAGGTTATCACACAGCTGAACTTGGTGCGAGTACTGAT
CACTGCAAAGTATTCCTAGATTCAGAGGACGTAGGACTTACTCTTGATCTCTCAGTTCTA
GGATCATATGCAGAGCTGTATAAAAGACTTGCAGACATGTTTGAGATGGAAAGATTAGAT
ATGGTGACCCGTGTGCTCTATCTAGATGCAACAGGTGCATCTAAACAAATTGGAGATGAA
CCATTCAGTGACTTCATCAAGACTGCAAAAAGACTAACAATTTTGAAGAAATCTGGCAAC
AGTGCTACAAGGAAATGGCTCACTGACCTGCCAATCCTCAACGTTGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042077
PEP Infomation

pacid=37451203 transcript=PGSC0003DMT400062489 locus=PGSC0003DMG400024320 ID=PGSC0003DMT400062489.v4.03 annot-version=v4.03
Sequence

MEVVEEKCVDSQFWHACTGSMVQIPPVNSKVFYFPQGHAEHTYTNVDFTLLPRIPAMILC
RVDTVKFLADTETDEVYAKIRLIPVEDFEDDSVVEKTEKPTFFAKTLTQSDANNGGGFSA
PRYCAETIFPKLDLKADPPVQVVKAKDVHGETWNFRHIYRGTPRRHLLTSGWSAFVNKKK
LVAGDSVVFLKAENDELCVGIRRVKRGGIGGPETQSGWNSTTGSYGGFLTEDENSMIRSC
SNENLISYGGRFRDKGKVSPDEIVRDSYLAASGQPFEIVYYPGASTPEYCVRASSVHAAM
SVQWCSGMRFKMAFETEGSSRISWFMGSISSVQVADPIRWPHSPWRLLQVTWDEPDLLQN
VKSVNPWLVELVSNMPDINLSHFSPPRKRLCLPQELALDRQFPLPSFSGNPLRSSSPFCY
PSDNSTAGIQGARHVQFGVPLLDLHRSEKLQLGVLQPPASQQVDADSESPIGTSKVQKES
NENVSCLLTMGTSSQMEEADNVKTPRFLLFGQPILTEQQMSSVLSTHAPPQVQAERDSDW
AQLKTERISQGWKCLSESLSSTTFLWNKGYHTAELGASTDHCKVFLDSEDVGLTLDLSVL
GSYAELYKRLADMFEMERLDMVTRVLYLDATGASKQIGDEPFSDFIKTAKRLTILKKSGN
SATRKWLTDLPILNVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400062489
Transcript Infomation

pacid=37451203 locus=PGSC0003DMG400024320 ID=PGSC0003DMT400062489.v4.03 annot-version=v4.03
Sequence

ATGGAGGTGGTGGAAGAGAAGTGTGTGGACTCTCAGTTTTGGCATGCCTGTACAGGAAGT
ATGGTGCAAATTCCTCCGGTGAACTCTAAGGTGTTCTATTTCCCACAAGGTCATGCTGAG
CATACATATACAAATGTTGATTTCACTCTACTGCCGAGAATTCCTGCGATGATTCTATGC
AGAGTTGATACTGTGAAGTTTTTAGCTGACACTGAAACTGATGAAGTTTATGCGAAAATT
AGGCTTATTCCGGTTGAAGACTTTGAAGATGACAGTGTGGTTGAAAAAACTGAGAAGCCT
ACTTTCTTTGCTAAGACATTGACTCAATCAGATGCGAATAATGGGGGTGGTTTTTCAGCT
CCGAGGTACTGTGCAGAGACAATTTTCCCCAAATTGGATCTCAAAGCTGATCCGCCTGTC
CAAGTAGTGAAGGCAAAGGATGTTCATGGTGAAACCTGGAATTTTAGGCACATTTATAGG
GGCACACCAAGGAGGCATTTGTTGACAAGTGGTTGGAGTGCATTTGTCAATAAGAAGAAG
CTGGTTGCAGGGGACTCTGTTGTGTTTCTCAAGGCAGAGAATGATGAGCTTTGTGTTGGA
ATTCGCAGGGTAAAGCGGGGTGGTATTGGTGGGCCGGAAACACAATCAGGGTGGAACTCA
ACTACTGGTAGTTATGGTGGATTTTTGACGGAAGACGAGAACAGTATGATTAGAAGTTGT
AGTAATGAAAATCTGATTTCTTATGGTGGGAGATTTAGAGATAAGGGAAAAGTGAGCCCT
GATGAAATTGTTAGGGATTCATATCTCGCTGCTAGTGGCCAGCCTTTTGAAATTGTTTAC
TACCCTGGTGCAAGCACTCCAGAATATTGCGTTAGGGCCTCTTCTGTGCATGCTGCAATG
AGTGTTCAATGGTGCTCAGGGATGAGGTTCAAAATGGCTTTTGAAACTGAGGGTTCTTCT
CGGATCAGCTGGTTCATGGGAAGTATATCTTCGGTTCAGGTTGCTGACCCCATCCGCTGG
CCTCATTCACCGTGGCGGCTTCTTCAGGTGACATGGGATGAACCAGATTTGTTGCAGAAT
GTAAAATCTGTAAACCCATGGCTTGTCGAATTGGTCTCTAATATGCCCGACATTAACTTG
TCACACTTCTCACCACCAAGGAAAAGGTTGTGTTTGCCACAAGAGTTAGCACTTGACCGC
CAATTTCCATTACCTTCATTTTCAGGCAACCCCCTCAGGTCTAGTAGTCCTTTTTGTTAT
CCGTCTGACAACAGTACTGCAGGCATACAGGGAGCCAGGCATGTTCAATTTGGAGTACCT
TTATTAGATCTCCACCGTAGCGAAAAGTTGCAGTTAGGTGTGCTACAACCACCCGCTTCC
CAACAAGTTGATGCTGATTCTGAAAGTCCTATTGGCACAAGTAAGGTCCAAAAAGAGAGC
AATGAAAATGTATCTTGCTTGCTTACCATGGGTACCTCTAGTCAGATGGAGGAAGCTGAT
AATGTGAAGACACCTCGGTTTTTACTCTTTGGCCAACCAATTCTCACTGAGCAGCAAATG
TCAAGTGTCCTCTCTACTCATGCTCCTCCACAAGTCCAAGCAGAAAGAGACTCCGATTGG
GCACAATTGAAAACTGAAAGAATTTCTCAAGGCTGGAAATGCCTTTCAGAAAGTCTATCA
AGCACTACATTTCTTTGGAATAAAGGTTATCACACAGCTGAACTTGGTGCGAGTACTGAT
CACTGCAAAGTATTCCTAGATTCAGAGGACGTAGGACTTACTCTTGATCTCTCAGTTCTA
GGATCATATGCAGAGCTGTATAAAAGACTTGCAGACATGTTTGAGATGGAAAGATTAGAT
ATGGTGACCCGTGTGCTCTATCTAGATGCAACAGGTGCATCTAAACAAATTGGAGATGAA
CCATTCAGTGACTTCATCAAGACTGCAAAAAGACTAACAATTTTGAAGAAATCTGGCAAC
AGTGCTACAAGGAAATGGCTCACTGACCTGCCAATCCTCAACGTTGTCTAG