Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062486
CDS Infomation

pacid=37452995 polypeptide=PGSC0003DMP400042074 locus=PGSC0003DMG400024318 ID=PGSC0003DMT400062486.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTTCCCAGAACGATTCTTGTAGAATGGAAGGGTGGTTATATCTAATTCGGTCT
AATCGGTTTGGGCTTCAGTATTCGAGGAAACGCTACTTTGTTCTTCACGATCTTCTTTTC
AAGAGCTATAAATCAAACCCAGTTACAAACATTGAGGATCCTGTTAGAAGTGCTGTTATT
GATTCCTGCATTAGGGTGACAGACAATGGGAGAGAGAGCATTCAAAGAAAAGTTGTGTTT
ATATTTACTCTATACAATGCCTCAAATCATAATGATCAGTTGAAGTTAGGAGCAAACAGG
CCTGAGGAAGCAGCAAGATGGATCCAGGCCCTGCAGGAAGCAGCTTTAAAGGCAGACATG
AATAAAAGAACTGCAGTTGATCGTCCAAGGCGTGACTCGCAGTCTTTGAGGTTAAATTGT
TCCAACAAATCTCATCATCTGAATTCCATTGATTGGACTTTCTGTTCATCCTCAGTGGCA
GATGCTACGACATCTGATGTTGTTGCACCGTCGTCCTGGACAATATTTGGTTGTCAGAAT
GGTCTTCGGCTATTTAAGGAAGCTAAGGATAGGGAATCTCATGGGAAGTGGAATGATCAC
CCTGCAATAATGGCTGTTGGTGTAGTTGATGGAACTTCAGAAGCCATTTTTCAAACACTC
ATGTCACTTGGTCCTTCAAGATCGGAATGGGATTTCTGTCATTACAAGGGTAGTGTCATT
GAACACCTTGATGGTCACACAGATATTGTTCATAAGCTTCTACGTCGGGATTGGCTACCT
TGGAGTATGAGAAAAAGAGATCTTCTTTTGCAGCGCTATTGGAGAAGGGAGGATGACGGA
ACATATGTTATTCTATACCATTCGGTGTTTCATCAGAAGTGTCCATGTCAGAAGGGCTAT
GTTCGTGCCTGCCTTAAAAGTGGAGGCTATGTAATATCACCTGTGAATCAAAAGAAGCAG
TCAGTAGTCAAGCATATGCTTGCTATTGATTGGAGATTCTGGAAGTCTAACTTACAAACA
TCTTCAACCAGATATATAACAATCCACATGCTAGGGAGACTCGCTGCTTTGAGGGAGCTT
TTTATAGCAAAATTAGGAGATTGCTCGTCCTCGTATTTTTTGGAGGAGCATGTGAGAGAC
AAAAGACTGCAACAAATTGAAGAAGTTAAGGTTGAAATACAAACCATAGTGGAAAATGGG
AAGAATATGGCAGATATGGAAGAAGAAGTCGCTAAATCACCTTCTGAACATGCAAGCTTG
ATGGGGTTAAATGATGCATCAGATGAGTTTTTTGATGTCTCTGAACCACTTGATTATGAC
CAGTCGGAAAATGGCTGGCCTTCTGATTTTGGCCCAGAGATGTACTCTCAGGACACACGG
CATGCCAGATTATCATCTGCTGCTGGTTTTGTGAAAAAGTTGCATGATCTGGCTGTTCAC
AAGCGGGGTTATGTAGATCTGCATGAAAAGGCAAAGGAAGATGCATTGTTGTGCCACTAT
GGGTCCACTCTTCCAAAAGATCCAACTTTTAATTTGCCTTGCAGTTGGGCCCAAACAGAT
CCGTCAACTTTTCTTATTCGGGGAGAGACTTATCTAGAAGATCGTAAGAAGATTAAGGCT
AAAGGCACGTTGATGCAAATGGTTGCTGCAGATTGGCTGAAGTCTGACAAGCGAGAAGAT
GATCTTGGTGGTCGTCCTGGGAGCATTGTTCAGAAATATGCAGCTAAGGGTGGTCCAGAA
TTTTTCTTCATTGTGAATATACAGGTACCAGGTTCAACAACATACACTCTTGCTCTCTAC
TATATGATGGACACTCCTATAGAAAACGCGCCCTTGCTGGAGAGTTTTGTCAAAGGGGAT
GATGCTTTTAGAAATTCAAGGTTCAAGCTCATACCATACATATCCAAGGGACCATGGATA
GTCAAGCAGAGTGTTGGAAAGAAAGCATGCCTTGTAGGTCCAGCGCTTGAAATTAATTAT
TTTCGGGGAAAGAACTACTTGGAGCTTGATATCAATGTTGGTTCTTCTACTGTGGCAAGG
GGAGTTGTAAGCCTTGTTGTTGGATATCTAAACAATCTTGTCATTGAAATGGCGTTTCTT
ATCCAGGCCAACACACCGGAGGAGCTTCCCGAATATCTTCTTGCAACATGTCGTCTTAAC
CATCTGGACATCTCTAAGGCTGTTCAAGTGAAACCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042074
PEP Infomation

pacid=37452995 transcript=PGSC0003DMT400062486 locus=PGSC0003DMG400024318 ID=PGSC0003DMT400062486.v4.03 annot-version=v4.03
Sequence

MGVSQNDSCRMEGWLYLIRSNRFGLQYSRKRYFVLHDLLFKSYKSNPVTNIEDPVRSAVI
DSCIRVTDNGRESIQRKVVFIFTLYNASNHNDQLKLGANRPEEAARWIQALQEAALKADM
NKRTAVDRPRRDSQSLRLNCSNKSHHLNSIDWTFCSSSVADATTSDVVAPSSWTIFGCQN
GLRLFKEAKDRESHGKWNDHPAIMAVGVVDGTSEAIFQTLMSLGPSRSEWDFCHYKGSVI
EHLDGHTDIVHKLLRRDWLPWSMRKRDLLLQRYWRREDDGTYVILYHSVFHQKCPCQKGY
VRACLKSGGYVISPVNQKKQSVVKHMLAIDWRFWKSNLQTSSTRYITIHMLGRLAALREL
FIAKLGDCSSSYFLEEHVRDKRLQQIEEVKVEIQTIVENGKNMADMEEEVAKSPSEHASL
MGLNDASDEFFDVSEPLDYDQSENGWPSDFGPEMYSQDTRHARLSSAAGFVKKLHDLAVH
KRGYVDLHEKAKEDALLCHYGSTLPKDPTFNLPCSWAQTDPSTFLIRGETYLEDRKKIKA
KGTLMQMVAADWLKSDKREDDLGGRPGSIVQKYAAKGGPEFFFIVNIQVPGSTTYTLALY
YMMDTPIENAPLLESFVKGDDAFRNSRFKLIPYISKGPWIVKQSVGKKACLVGPALEINY
FRGKNYLELDINVGSSTVARGVVSLVVGYLNNLVIEMAFLIQANTPEELPEYLLATCRLN
HLDISKAVQVKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400062486
Transcript Infomation

pacid=37452995 locus=PGSC0003DMG400024318 ID=PGSC0003DMT400062486.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTTCCCAGAACGATTCTTGTAGAATGGAAGGGTGGTTATATCTAATTCGGTCT
AATCGGTTTGGGCTTCAGTATTCGAGGAAACGCTACTTTGTTCTTCACGATCTTCTTTTC
AAGAGCTATAAATCAAACCCAGTTACAAACATTGAGGATCCTGTTAGAAGTGCTGTTATT
GATTCCTGCATTAGGGTGACAGACAATGGGAGAGAGAGCATTCAAAGAAAAGTTGTGTTT
ATATTTACTCTATACAATGCCTCAAATCATAATGATCAGTTGAAGTTAGGAGCAAACAGG
CCTGAGGAAGCAGCAAGATGGATCCAGGCCCTGCAGGAAGCAGCTTTAAAGGCAGACATG
AATAAAAGAACTGCAGTTGATCGTCCAAGGCGTGACTCGCAGTCTTTGAGGTTAAATTGT
TCCAACAAATCTCATCATCTGAATTCCATTGATTGGACTTTCTGTTCATCCTCAGTGGCA
GATGCTACGACATCTGATGTTGTTGCACCGTCGTCCTGGACAATATTTGGTTGTCAGAAT
GGTCTTCGGCTATTTAAGGAAGCTAAGGATAGGGAATCTCATGGGAAGTGGAATGATCAC
CCTGCAATAATGGCTGTTGGTGTAGTTGATGGAACTTCAGAAGCCATTTTTCAAACACTC
ATGTCACTTGGTCCTTCAAGATCGGAATGGGATTTCTGTCATTACAAGGGTAGTGTCATT
GAACACCTTGATGGTCACACAGATATTGTTCATAAGCTTCTACGTCGGGATTGGCTACCT
TGGAGTATGAGAAAAAGAGATCTTCTTTTGCAGCGCTATTGGAGAAGGGAGGATGACGGA
ACATATGTTATTCTATACCATTCGGTGTTTCATCAGAAGTGTCCATGTCAGAAGGGCTAT
GTTCGTGCCTGCCTTAAAAGTGGAGGCTATGTAATATCACCTGTGAATCAAAAGAAGCAG
TCAGTAGTCAAGCATATGCTTGCTATTGATTGGAGATTCTGGAAGTCTAACTTACAAACA
TCTTCAACCAGATATATAACAATCCACATGCTAGGGAGACTCGCTGCTTTGAGGGAGCTT
TTTATAGCAAAATTAGGAGATTGCTCGTCCTCGTATTTTTTGGAGGAGCATGTGAGAGAC
AAAAGACTGCAACAAATTGAAGAAGTTAAGGTTGAAATACAAACCATAGTGGAAAATGGG
AAGAATATGGCAGATATGGAAGAAGAAGTCGCTAAATCACCTTCTGAACATGCAAGCTTG
ATGGGGTTAAATGATGCATCAGATGAGTTTTTTGATGTCTCTGAACCACTTGATTATGAC
CAGTCGGAAAATGGCTGGCCTTCTGATTTTGGCCCAGAGATGTACTCTCAGGACACACGG
CATGCCAGATTATCATCTGCTGCTGGTTTTGTGAAAAAGTTGCATGATCTGGCTGTTCAC
AAGCGGGGTTATGTAGATCTGCATGAAAAGGCAAAGGAAGATGCATTGTTGTGCCACTAT
GGGTCCACTCTTCCAAAAGATCCAACTTTTAATTTGCCTTGCAGTTGGGCCCAAACAGAT
CCGTCAACTTTTCTTATTCGGGGAGAGACTTATCTAGAAGATCGTAAGAAGATTAAGGCT
AAAGGCACGTTGATGCAAATGGTTGCTGCAGATTGGCTGAAGTCTGACAAGCGAGAAGAT
GATCTTGGTGGTCGTCCTGGGAGCATTGTTCAGAAATATGCAGCTAAGGGTGGTCCAGAA
TTTTTCTTCATTGTGAATATACAGGTACCAGGTTCAACAACATACACTCTTGCTCTCTAC
TATATGATGGACACTCCTATAGAAAACGCGCCCTTGCTGGAGAGTTTTGTCAAAGGGGAT
GATGCTTTTAGAAATTCAAGGTTCAAGCTCATACCATACATATCCAAGGGACCATGGATA
GTCAAGCAGAGTGTTGGAAAGAAAGCATGCCTTGTAGGTCCAGCGCTTGAAATTAATTAT
TTTCGGGGAAAGAACTACTTGGAGCTTGATATCAATGTTGGTTCTTCTACTGTGGCAAGG
GGAGTTGTAAGCCTTGTTGTTGGATATCTAAACAATCTTGTCATTGAAATGGCGTTTCTT
ATCCAGGCCAACACACCGGAGGAGCTTCCCGAATATCTTCTTGCAACATGTCGTCTTAAC
CATCTGGACATCTCTAAGGCTGTTCAAGTGAAACCGTGA