Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062467
CDS Infomation

pacid=37452272 polypeptide=PGSC0003DMP400042061 locus=PGSC0003DMG400024311 ID=PGSC0003DMT400062467.v4.03 annot-version=v4.03
Sequence

ATGGATATCGATTATGGCAAGTGTTGGGACACTTCAAAGAAGTCTTGGAAGAGTACACTG
ATTCTGGCTTATCAGAGTCTGGGGGTAGTGTATGGTGATCTCAGTATTTCCCCTCTCTAT
GTCTACAAGAGCACATTTGCAGAAGACATTCATCATTCAGAGACTAATGAAGAGATTTTT
GGCGTTCTCTCTTTCGTTTTTTGGACTTTAACTCTAGTTCCTCTATTCAAATATGTCTTT
ATCGTGCTTCGAGCTGATGACAATGGAGAAGGTGGTACTTTTGCGCTCTATTCCTTAATA
TGCAGGCATGCCAAAGTTAGCCTTCTGCCTAACAGGCAAGTTGCTGATGAAGCTCTTTCT
ACCTACAAACTTGAGCATCCTCCTGAGATGAAGAACAGCTCAAAGTTGAAGTTGCTTCTT
GAGAAGCACAAGTCCTTACACACTGCTTTGCTTATTTTGGTGCTTCTTGGCACTTGTATG
GTGATTGGAGATGGGCTGCTTACTCCAGCCATATCTGTATTCTCTGCGGTCTCTGGCCTT
GAGTTATCGATGTCTCGGGAGCATCATCAATATGCAGTGATTCCAATAACTTGCTTCATA
TTGGTCTGCCTATTCGCATTACAACATTATGGCACACATCGAGTTGGTTTTGTTTTTGCA
CCAATTGTGATGACCTGGTTACTCTGCATTAGTGCTCTTGGGTTATACAACATTATCCAC
TGGAATCCACAGGTTTATAAAGCTCTTTCCCCCTATTACATGGTAAAGTTCCTGAAGAAA
ACAAGAAAAGGTGGATGGATGTCTTTGGGTGGAATTCTGCTCTGCATAACTGGTTCTGAA
GCAATGTTTGCTGATCTTGGGCATTTCTCATATACTGCAATTCAAATTGCATTCACCTTT
CTGGTTTATCCAGCACTAATCTTGGCCTATATGGGTCAAGCAGCTTTCTTATCAAAGCAT
CACCACACCATTCACAAGATTGGTTTCTATGTATCAGTTCCAGATGTTGTGAGATGGCCA
GTGCTAGTAATAGCAATTCTGGCTTCTGTTGTGGGAAGTCAGGCAATCATCAGTGGAACA
TTCTCAATAATCAACCAGAGTCAATCCCTTGGTTGCTTCCCAAGAGTCAAGGTTGTTCAC
ACCAATGCCAAGATGCATGGCCAGATATACATTCCCGAGATCAATTGGATACTCATGATT
CTTTGTGTTGCTGTGACTATTGGTTTCAGAGACACAAAGCACATGGGAAATGCGTCAGGA
CTAGCAGTGATGGCGGTGATGCTAGTGACCACTTGCCTTACTTCATTAGTCATCATCCTC
TGCTGGAACAAGCCTCCAATACTTGCCCTTGGATTTCTCCTTGTGTTTGGGTCTATTGAG
TTACTCTACTTCTCAGCCTCCGTCATTAAGTTTCTTGAAGGCGCTTGGCTACCAATCCTG
CTTGCACTCTTTTTGGTTACTGTCATGTTTGTTTGGCACTACGCCACAGTTAAAAAGTAT
GAATATGATCTCCACAATAAGGTTTCATTAGAATGGCTGCTTGCACTAGGTCCAAGCTTG
GGTATTACTCGAGTCCCTGGCATCGGCCTCGTATTCACAGATTTGACTTCTGGGATTCCA
GCCAACTTCTCACGTTTTGTTACCAACCTCCCTGCCTACCACCGGATACTTGTTTTCGTG
TGTGTGAAATCCGTGCCAGTCCCTTTTGTTCCCCCAGCTGAGAGATACCTCGTAGGCCGT
GTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGACGTT
CACCAGGATGTCGACTCCTTTGAATCCGAACTAGTCAGTAAGCTGGCTGATTTCATCCGG
TATGATTGGTACAAGGCACATGGAATCATCGACGCATGCAACGAGGATGACTGCTCACGT
TCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCAGGC
ACACCAGCTTTCGAACTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTATCGGGTTCCCT
ACAGTTGAAAGTGTGACAGATGTGATAGAGATGCAACCTGTGGAAAGAAGAGTGAGATTT
GCCATAGATAACGAGTCGGAAGTGGATTCACGGGACGAAATGAGTTCTCAGCTGCAGGAA
GAGCTAGAAGATTTATATACAGCACAACAAGCAGGTACAGCATTCGTACTAGGACATTCA
CACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTAT
AATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCC
CTTCTTGAAGTTGGCATGGTCTACATTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042061
PEP Infomation

pacid=37452272 transcript=PGSC0003DMT400062467 locus=PGSC0003DMG400024311 ID=PGSC0003DMT400062467.v4.03 annot-version=v4.03
Sequence

MDIDYGKCWDTSKKSWKSTLILAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSETNEEIF
GVLSFVFWTLTLVPLFKYVFIVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALS
TYKLEHPPEMKNSSKLKLLLEKHKSLHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGL
ELSMSREHHQYAVIPITCFILVCLFALQHYGTHRVGFVFAPIVMTWLLCISALGLYNIIH
WNPQVYKALSPYYMVKFLKKTRKGGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTF
LVYPALILAYMGQAAFLSKHHHTIHKIGFYVSVPDVVRWPVLVIAILASVVGSQAIISGT
FSIINQSQSLGCFPRVKVVHTNAKMHGQIYIPEINWILMILCVAVTIGFRDTKHMGNASG
LAVMAVMLVTTCLTSLVIILCWNKPPILALGFLLVFGSIELLYFSASVIKFLEGAWLPIL
LALFLVTVMFVWHYATVKKYEYDLHNKVSLEWLLALGPSLGITRVPGIGLVFTDLTSGIP
ANFSRFVTNLPAYHRILVFVCVKSVPVPFVPPAERYLVGRVGPAAHRSYRCIVRYGYRDV
HQDVDSFESELVSKLADFIRYDWYKAHGIIDACNEDDCSRSGASSGECRLTVIGTLDLSG
TPAFELEETMQPASVSIGFPTVESVTDVIEMQPVERRVRFAIDNESEVDSRDEMSSQLQE
ELEDLYTAQQAGTAFVLGHSHVKAKQGSSVLKRLAINYGYNFLRRNCRGADVSLKVPPAS
LLEVGMVYIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400062467
Transcript Infomation

pacid=37452272 locus=PGSC0003DMG400024311 ID=PGSC0003DMT400062467.v4.03 annot-version=v4.03
Sequence

ATGGATATCGATTATGGCAAGTGTTGGGACACTTCAAAGAAGTCTTGGAAGAGTACACTG
ATTCTGGCTTATCAGAGTCTGGGGGTAGTGTATGGTGATCTCAGTATTTCCCCTCTCTAT
GTCTACAAGAGCACATTTGCAGAAGACATTCATCATTCAGAGACTAATGAAGAGATTTTT
GGCGTTCTCTCTTTCGTTTTTTGGACTTTAACTCTAGTTCCTCTATTCAAATATGTCTTT
ATCGTGCTTCGAGCTGATGACAATGGAGAAGGTGGTACTTTTGCGCTCTATTCCTTAATA
TGCAGGCATGCCAAAGTTAGCCTTCTGCCTAACAGGCAAGTTGCTGATGAAGCTCTTTCT
ACCTACAAACTTGAGCATCCTCCTGAGATGAAGAACAGCTCAAAGTTGAAGTTGCTTCTT
GAGAAGCACAAGTCCTTACACACTGCTTTGCTTATTTTGGTGCTTCTTGGCACTTGTATG
GTGATTGGAGATGGGCTGCTTACTCCAGCCATATCTGTATTCTCTGCGGTCTCTGGCCTT
GAGTTATCGATGTCTCGGGAGCATCATCAATATGCAGTGATTCCAATAACTTGCTTCATA
TTGGTCTGCCTATTCGCATTACAACATTATGGCACACATCGAGTTGGTTTTGTTTTTGCA
CCAATTGTGATGACCTGGTTACTCTGCATTAGTGCTCTTGGGTTATACAACATTATCCAC
TGGAATCCACAGGTTTATAAAGCTCTTTCCCCCTATTACATGGTAAAGTTCCTGAAGAAA
ACAAGAAAAGGTGGATGGATGTCTTTGGGTGGAATTCTGCTCTGCATAACTGGTTCTGAA
GCAATGTTTGCTGATCTTGGGCATTTCTCATATACTGCAATTCAAATTGCATTCACCTTT
CTGGTTTATCCAGCACTAATCTTGGCCTATATGGGTCAAGCAGCTTTCTTATCAAAGCAT
CACCACACCATTCACAAGATTGGTTTCTATGTATCAGTTCCAGATGTTGTGAGATGGCCA
GTGCTAGTAATAGCAATTCTGGCTTCTGTTGTGGGAAGTCAGGCAATCATCAGTGGAACA
TTCTCAATAATCAACCAGAGTCAATCCCTTGGTTGCTTCCCAAGAGTCAAGGTTGTTCAC
ACCAATGCCAAGATGCATGGCCAGATATACATTCCCGAGATCAATTGGATACTCATGATT
CTTTGTGTTGCTGTGACTATTGGTTTCAGAGACACAAAGCACATGGGAAATGCGTCAGGA
CTAGCAGTGATGGCGGTGATGCTAGTGACCACTTGCCTTACTTCATTAGTCATCATCCTC
TGCTGGAACAAGCCTCCAATACTTGCCCTTGGATTTCTCCTTGTGTTTGGGTCTATTGAG
TTACTCTACTTCTCAGCCTCCGTCATTAAGTTTCTTGAAGGCGCTTGGCTACCAATCCTG
CTTGCACTCTTTTTGGTTACTGTCATGTTTGTTTGGCACTACGCCACAGTTAAAAAGTAT
GAATATGATCTCCACAATAAGGTTTCATTAGAATGGCTGCTTGCACTAGGTCCAAGCTTG
GGTATTACTCGAGTCCCTGGCATCGGCCTCGTATTCACAGATTTGACTTCTGGGATTCCA
GCCAACTTCTCACGTTTTGTTACCAACCTCCCTGCCTACCACCGGATACTTGTTTTCGTG
TGTGTGAAATCCGTGCCAGTCCCTTTTGTTCCCCCAGCTGAGAGATACCTCGTAGGCCGT
GTTGGTCCTGCAGCTCATCGTTCCTATAGATGCATTGTCCGTTATGGTTACCGTGACGTT
CACCAGGATGTCGACTCCTTTGAATCCGAACTAGTCAGTAAGCTGGCTGATTTCATCCGG
TATGATTGGTACAAGGCACATGGAATCATCGACGCATGCAACGAGGATGACTGCTCACGT
TCTGGTGCATCGTCAGGAGAATGTAGACTGACCGTTATAGGAACTCTAGATTTGTCAGGC
ACACCAGCTTTCGAACTCGAAGAAACCATGCAGCCTGCAAGCGTGTCTATCGGGTTCCCT
ACAGTTGAAAGTGTGACAGATGTGATAGAGATGCAACCTGTGGAAAGAAGAGTGAGATTT
GCCATAGATAACGAGTCGGAAGTGGATTCACGGGACGAAATGAGTTCTCAGCTGCAGGAA
GAGCTAGAAGATTTATATACAGCACAACAAGCAGGTACAGCATTCGTACTAGGACATTCA
CACGTGAAAGCAAAACAAGGATCATCTGTGTTGAAGAGGTTGGCTATAAATTATGGTTAT
AATTTCCTTAGGAGGAATTGCAGAGGTGCAGATGTATCCCTTAAAGTTCCTCCAGCATCC
CTTCTTGAAGTTGGCATGGTCTACATTGTTTAA