Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062461
CDS Infomation

pacid=37453868 polypeptide=PGSC0003DMP400042056 locus=PGSC0003DMG400024309 ID=PGSC0003DMT400062461.v4.03 annot-version=v4.03
Sequence

ATGGTGGGAGTCGCTTACGATTGCCTACTAAATCCACAGGGAGCTGTCCGATCGACATTT
GAAAATGCGCTAAGTAAAGTCTCTGATCCAGCCGCGTTCGACGGCAAGGACTGGGGCGCC
ATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCAGGTTCCAGTTCTG
AATCCTTCATCTATTGCACGGCTGAAATCCAATACTCTTGTTCGATTTCGGGGAATGATA
CAAGATATGCTGGGAAATGAATTATATGTTGGCATGTACAAGGATGGAGAAACTTGGAGA
ACGAATAAGTTTGGTGACTTCTTTCAATTCCCTATGGCTACGGGATCTTCACCTGACATG
CGAGTGTGGGAGCGGCGATTACTTTACTGTGTTCCTGTTCCAGGGCAGAATTCATGGATT
GAATATTCCTCTGAATCCCTGCTCAATCCAAGTTCAATTTCCTCATCTCCACAAAGGGAG
AAACGCCATAGGGAGGATGATACAGCAATGGATGACATTGATATGCAAGTGACAAATGAG
GAGGTTCAAGCTTCCACCTCCAATAAAAAGATGCGTGAGGATGGGATCACTTCCAATTCA
TCCAATCTAGGGGACACTCCAACTGCTGACATTGGTTCAGCTACGAGTGTGCTTCCATAT
TTTGACAGAAATTCTTTGCCATGTCTTGTGAAGATATACGACTCTCCTGAATCTGATTTG
AAGCTAAATGATGTTTTTGAGTTCATTGGTGTCTTAACATTTGATCCGGAGTTTTCGGTA
GACAAAAATGTTGACAATGATATTTTGGGCTATTTGGGTGATGATGATACACAGACTCAG
ATGCCTCCAACCAAGGTACCTCGACTCCATTGCCTTATTCACAAGAAGCTTTCCAATCAA
GACTTTATTACAGGTTCTCCCACACTTGAGCTTAAATCCCACCTGGTGAAAGAAATAAGG
GAAACTCTATTAAGGCATCTCACGACTATCCTAGGAAATGATGGTGTAGCAGCTAATCTC
ATGTTATTGCATCTGTTGTCTAAGGTGCATGCTAGAGTGGATTCAACTGCCGTTGGAAAG
CTTTCCTTGAACCTAACATGTTTTAACAAGGAGACCCTGTCTGTTTATGGTCATCGTCTT
AATCTTGCACTCAAGAACCTTCTACCGTTCACACATTGTGTACCTTTAACAGTGGATTAC
CTTAACAAAATTCCTCTTGCCCCCAAAAAAAATTATCAAACTAATAGGCTGGCATCAGGG
ATACTGCAACTTGCTGAAGGTTCTCATTTAACTATTGACGAGACTCAATTACAAGAAGGG
AGACTTAATCCTATTGGGCTTGAGAATGCAAGAGTCCTGCAAAGCTTGTTGGAACAGCAA
AAGGTTGAATATGACTTCACTTATTATAAAATGGACATGCCTGCGGACATTCAGTTGCTA
GTTCTTTCTGAGGGGAAATCCAACATACTCCCAGCAGATTTGGTTTTACCATTTCGACCA
TTGTCAGTAGATGCTGCTCAAGATGTTGAGATAGAAGTTCTGCAATCTTGGAGATGGTAC
CTGGCTACTATGAGATCGTTGTCTCACTCTATTACGCAAGAGATGCAGAAGGTGGTAGAA
GATGACTTAGTAGCGGCAAGGCAGGCTGATAGAAGCTTAGGTAGCCTAGATTTCAGCAGG
TTTCTGACAATGGGTCGTCTTGTATCTCTAAGTTTTGGTGAAACCACTTTAACCTTAGAA
CATTGGCAAATGGCCAAAGAATTAGAGCGCCTCCGAAAGGAGAGATTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400042056
PEP Infomation

pacid=37453868 transcript=PGSC0003DMT400062461 locus=PGSC0003DMG400024309 ID=PGSC0003DMT400062461.v4.03 annot-version=v4.03
Sequence

MVGVAYDCLLNPQGAVRSTFENALSKVSDPAAFDGKDWGAIDLFRKFLYDDGGLSQVPVL
NPSSIARLKSNTLVRFRGMIQDMLGNELYVGMYKDGETWRTNKFGDFFQFPMATGSSPDM
RVWERRLLYCVPVPGQNSWIEYSSESLLNPSSISSSPQREKRHREDDTAMDDIDMQVTNE
EVQASTSNKKMREDGITSNSSNLGDTPTADIGSATSVLPYFDRNSLPCLVKIYDSPESDL
KLNDVFEFIGVLTFDPEFSVDKNVDNDILGYLGDDDTQTQMPPTKVPRLHCLIHKKLSNQ
DFITGSPTLELKSHLVKEIRETLLRHLTTILGNDGVAANLMLLHLLSKVHARVDSTAVGK
LSLNLTCFNKETLSVYGHRLNLALKNLLPFTHCVPLTVDYLNKIPLAPKKNYQTNRLASG
ILQLAEGSHLTIDETQLQEGRLNPIGLENARVLQSLLEQQKVEYDFTYYKMDMPADIQLL
VLSEGKSNILPADLVLPFRPLSVDAAQDVEIEVLQSWRWYLATMRSLSHSITQEMQKVVE
DDLVAARQADRSLGSLDFSRFLTMGRLVSLSFGETTLTLEHWQMAKELERLRKERL*

Transcript Sequence

Transcript ID

PGSC0003DMT400062461
Transcript Infomation

pacid=37453868 locus=PGSC0003DMG400024309 ID=PGSC0003DMT400062461.v4.03 annot-version=v4.03
Sequence

ATGGTGGGAGTCGCTTACGATTGCCTACTAAATCCACAGGGAGCTGTCCGATCGACATTT
GAAAATGCGCTAAGTAAAGTCTCTGATCCAGCCGCGTTCGACGGCAAGGACTGGGGCGCC
ATTGATCTATTCAGGAAGTTTCTCTATGACGATGGCGGCCTTTCTCAGGTTCCAGTTCTG
AATCCTTCATCTATTGCACGGCTGAAATCCAATACTCTTGTTCGATTTCGGGGAATGATA
CAAGATATGCTGGGAAATGAATTATATGTTGGCATGTACAAGGATGGAGAAACTTGGAGA
ACGAATAAGTTTGGTGACTTCTTTCAATTCCCTATGGCTACGGGATCTTCACCTGACATG
CGAGTGTGGGAGCGGCGATTACTTTACTGTGTTCCTGTTCCAGGGCAGAATTCATGGATT
GAATATTCCTCTGAATCCCTGCTCAATCCAAGTTCAATTTCCTCATCTCCACAAAGGGAG
AAACGCCATAGGGAGGATGATACAGCAATGGATGACATTGATATGCAAGTGACAAATGAG
GAGGTTCAAGCTTCCACCTCCAATAAAAAGATGCGTGAGGATGGGATCACTTCCAATTCA
TCCAATCTAGGGGACACTCCAACTGCTGACATTGGTTCAGCTACGAGTGTGCTTCCATAT
TTTGACAGAAATTCTTTGCCATGTCTTGTGAAGATATACGACTCTCCTGAATCTGATTTG
AAGCTAAATGATGTTTTTGAGTTCATTGGTGTCTTAACATTTGATCCGGAGTTTTCGGTA
GACAAAAATGTTGACAATGATATTTTGGGCTATTTGGGTGATGATGATACACAGACTCAG
ATGCCTCCAACCAAGGTACCTCGACTCCATTGCCTTATTCACAAGAAGCTTTCCAATCAA
GACTTTATTACAGGTTCTCCCACACTTGAGCTTAAATCCCACCTGGTGAAAGAAATAAGG
GAAACTCTATTAAGGCATCTCACGACTATCCTAGGAAATGATGGTGTAGCAGCTAATCTC
ATGTTATTGCATCTGTTGTCTAAGGTGCATGCTAGAGTGGATTCAACTGCCGTTGGAAAG
CTTTCCTTGAACCTAACATGTTTTAACAAGGAGACCCTGTCTGTTTATGGTCATCGTCTT
AATCTTGCACTCAAGAACCTTCTACCGTTCACACATTGTGTACCTTTAACAGTGGATTAC
CTTAACAAAATTCCTCTTGCCCCCAAAAAAAATTATCAAACTAATAGGCTGGCATCAGGG
ATACTGCAACTTGCTGAAGGTTCTCATTTAACTATTGACGAGACTCAATTACAAGAAGGG
AGACTTAATCCTATTGGGCTTGAGAATGCAAGAGTCCTGCAAAGCTTGTTGGAACAGCAA
AAGGTTGAATATGACTTCACTTATTATAAAATGGACATGCCTGCGGACATTCAGTTGCTA
GTTCTTTCTGAGGGGAAATCCAACATACTCCCAGCAGATTTGGTTTTACCATTTCGACCA
TTGTCAGTAGATGCTGCTCAAGATGTTGAGATAGAAGTTCTGCAATCTTGGAGATGGTAC
CTGGCTACTATGAGATCGTTGTCTCACTCTATTACGCAAGAGATGCAGAAGGTGGTAGAA
GATGACTTAGTAGCGGCAAGGCAGGCTGATAGAAGCTTAGGTAGCCTAGATTTCAGCAGG
TTTCTGACAATGGGTCGTCTTGTATCTCTAAGTTTTGGTGAAACCACTTTAACCTTAGAA
CATTGGCAAATGGCCAAAGAATTAGAGCGCCTCCGAAAGGAGAGATTATAG