Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062439
CDS Infomation

pacid=37437512 polypeptide=PGSC0003DMP400042039 locus=PGSC0003DMG400024301 ID=PGSC0003DMT400062439.v4.03 annot-version=v4.03
Sequence

ATGGAACAAACTGAAAACTCCAACAAATGCAACTCTAAATCAACAACTGCCAAAATATGT
CCAAATAACAACAACAACAACAATAATCACTATATTGCTTTTGGTTTTCATCACAATACT
AATAATACTAATAATCAAAATCAATATCAAACTTACCCTCCTCTTCTCCCTTTACCTCCT
CTACTACCTCCTCTTCAACTACCTTTTCCTCAAAATCACAACTTCAGATCAAGAACCCAT
GTTCACAAACCTTCATTCAACCAGAATCATCCTTTTCTTGCCACCCCTTCTGATTCCAAG
ATTCAAGAAATCTCAGCCTCAAAGGTGCTCCAAAGGCAAAATGATGTGTCCAAACAGAAA
TATGGAAGGAGGGTCAAGGCTGCTGCTACCACCACAGAATCTCTTGTGGTGGCAAGAAGA
CCAGATTCTGGTGGTGTTGAAGGACAAGTAATCTCACTTCTTGCTAATCATTTCCTTGTC
CAATTTGATCCTTCACAGAGAATTTTCCATTATGATGTTGAAATTTCACCTCATCCATCC
AAGGATATTGCTAGGCTAATCAAGAAAAAGCTTGTGGAGGACCATTCTGTTATGCTATCA
GGTGCTCTTCCAGTTTATGATGGTGGAAGGACTATATATAGCCCTATTGAGTTTCAAAAT
AATAAGATTGAGTTTTACATTAGCCTGCCAATTCCTAGTAGTGGCAGCAACAAGTCTGGA
GAAATGGTTAAGTTGCAGAAAGAAGAACAGCAGATTAAGCTTTTCCGCGTTAACATCAAA
CTTATATCTAAATTTGATGGGAAAGAACTAAATAGCTACTTGAATAAAGAAGGAGATGAT
AGTGGGAGTCCACTTCCTCAGGAATATCTGCATGCTTTAGATGTCGTGTTGCGCGAGAGC
CCAACGGAGAAATGTATAACAGCTGGGAGATCGTTTTACTCGAGTTGTATGGGAGGAGAA
AAAGATATCGGGGGCGGAGCCGTGGCGCTAAGGGGGTTCTTTCAGAGTCTTAGACCAACA
CAGCAAGGACTTGCTCTCAATGTTGATTTCTCAGTGACTGCTTTCCATGAGAGTATCGGA
GTGATCACCTACTTGGAAAAACGCCTCGACTTCCTCCACGACATTTCTCACAGGAAAACA
AGAGGCTTGACAAATGATGAGAAGAAAGAGGTTGAGAAAGCACTAAAGAACATCAGGGTC
TTTGTTTGCCACAGAGAGACTGTTCAAAGATATCGTATTTACAGCTTAACCGAGGAGGTT
ACGGAGAACCTCTGCTTTCAGGACAGGGATGGAAAAATTCTAAGAATAGTGAACTACTTC
AAGGATCATTACAACTATGATATACTATATAGGAACTTGCCGTGCTTGCAGATTAGCAGA
AGTAAACCTTGTTATCTTCCGATGGAGCTTTGTATGATTTGTGAAGGACAGAAGTTTCTA
GGGAAGCTTTCGGATGATCAGACTGCAAGAATACTCAAAATGGGATGTCAAAGGCCAAGG
GAAAGAAAGGCTATTATAGACAGAGTGGTGACAGGATCGGTTGGACCAACAAGTGGCAAT
CACGCGAGTGACTTCAAACTCCAAATCTCGAAAGAAATGACTCAATTGTATGGGAGAATT
CTTCAGCCTCCTAAGCTTAAACTAGGTGATCGTGGTCAGGTTAGAAATCTTATTCCTTCC
CGGCTCGATAGGCAGTGGAATCTTCTGGACAGCCATGTCTTCGAAGGTACTCGAGTTGAG
AGATGGGCACTAATGAGTTTTGGTGGAACCTCTGATCAGAAGTCCCACATACCAAAATTC
ATAAACCAGTTATGTCAAAGGTGTGAGCAATTAGGCATCTTTCTGAACAAGAATACAGTA
CTTAACCCTCAGTTTGAACCCTTGCATTTGCTCAACAATGTTAAAAACTTAGAAACCAAA
CTCAACAAGTTACATAGAGCTTCATTTAACAATCTCCAACTTGTTATTTGTGTGATGGAG
AGAAAACACAAAGGATACGCGGACTTGAAAAGAATTGCTGAGACAAGCATTGGGGTTGTA
ACACAGTGCTGTTTGTACCCGAACCTTGGCAAAATTAGCTCACAGTTTTTGGCAAATTTG
GCTCTCAAGATCAATGCCAAAGTTGGGGGATGCACAGTTGCATTGTACAATTCATTGCCT
TCTCAAATACCACGGCTCTTCAAACATGACTGTCCAGTCATTTTTATGGGTGCGGATGTG
ACTCATCCGCACCCTCTTGATGATTTTAGCCCCTCCGTCGCTGCTGTAGTTGGTAGTGTA
AATTGGCCAGCAGCCAACAAGTATGTCTCCAGGATGAGATCCCAAACACATAGGCAGGAG
ATCATTCAAGATCTCAGCACGATGGTCGGGGAGATTATTGATGATTTTTATGAGGAGCTA
CTAAAACTCCCTGAGAGAATAATCTTCTTCCGGGATGGAGTAAGTGAAACACAATTCCTG
AAAGTACTTAAAGAGGAGCTCCAAGCAATTCGCATGGCATGTTCGAGATTTCCAGGTTAC
AAACCTCCCATTACTTTTGTGGTAGTTCAAAAAAGACACCATACTAGGCTATTTCCATGT
GAACTTGATCTGTCAACAACTAAAAACACGCTCTTCAACGAAAACATCCTACCAGGTACA
GTTGTAGATACAGTGATCACTCATCCAAGTGAGTTCGACTTCTATCTATGCAGCCATTGG
GGTGTAAAAGGAACAAGCAGGCCAATACATTACCATGTTCTATGGGATGAAAACCAGTTC
ACTTCTGATGAGCTACAAAAATTGGTATACAACCTTTGCTACACATTTGTGAGATGCACC
AAGCCTATTTCACTGGTGCCACCGGCTTATTACGCCCATTTAGCTGCATATAGAGGCAGA
CTGTATCTTGAACGTTCCGATTTGTCTACTCTAACAAGAAGTTCTAACATATCTCGCGCT
GCTCCACCGAAGACAACTCCTTTACCTAAACTCACTGAAAACATTAAAAAGCTTATGTTT
TACTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042039
PEP Infomation

pacid=37437512 transcript=PGSC0003DMT400062439 locus=PGSC0003DMG400024301 ID=PGSC0003DMT400062439.v4.03 annot-version=v4.03
Sequence

MEQTENSNKCNSKSTTAKICPNNNNNNNNHYIAFGFHHNTNNTNNQNQYQTYPPLLPLPP
LLPPLQLPFPQNHNFRSRTHVHKPSFNQNHPFLATPSDSKIQEISASKVLQRQNDVSKQK
YGRRVKAAATTTESLVVARRPDSGGVEGQVISLLANHFLVQFDPSQRIFHYDVEISPHPS
KDIARLIKKKLVEDHSVMLSGALPVYDGGRTIYSPIEFQNNKIEFYISLPIPSSGSNKSG
EMVKLQKEEQQIKLFRVNIKLISKFDGKELNSYLNKEGDDSGSPLPQEYLHALDVVLRES
PTEKCITAGRSFYSSCMGGEKDIGGGAVALRGFFQSLRPTQQGLALNVDFSVTAFHESIG
VITYLEKRLDFLHDISHRKTRGLTNDEKKEVEKALKNIRVFVCHRETVQRYRIYSLTEEV
TENLCFQDRDGKILRIVNYFKDHYNYDILYRNLPCLQISRSKPCYLPMELCMICEGQKFL
GKLSDDQTARILKMGCQRPRERKAIIDRVVTGSVGPTSGNHASDFKLQISKEMTQLYGRI
LQPPKLKLGDRGQVRNLIPSRLDRQWNLLDSHVFEGTRVERWALMSFGGTSDQKSHIPKF
INQLCQRCEQLGIFLNKNTVLNPQFEPLHLLNNVKNLETKLNKLHRASFNNLQLVICVME
RKHKGYADLKRIAETSIGVVTQCCLYPNLGKISSQFLANLALKINAKVGGCTVALYNSLP
SQIPRLFKHDCPVIFMGADVTHPHPLDDFSPSVAAVVGSVNWPAANKYVSRMRSQTHRQE
IIQDLSTMVGEIIDDFYEELLKLPERIIFFRDGVSETQFLKVLKEELQAIRMACSRFPGY
KPPITFVVVQKRHHTRLFPCELDLSTTKNTLFNENILPGTVVDTVITHPSEFDFYLCSHW
GVKGTSRPIHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGR
LYLERSDLSTLTRSSNISRAAPPKTTPLPKLTENIKKLMFYC*

Transcript Sequence

Transcript ID

PGSC0003DMT400062439
Transcript Infomation

pacid=37437512 locus=PGSC0003DMG400024301 ID=PGSC0003DMT400062439.v4.03 annot-version=v4.03
Sequence

ATGGAACAAACTGAAAACTCCAACAAATGCAACTCTAAATCAACAACTGCCAAAATATGT
CCAAATAACAACAACAACAACAATAATCACTATATTGCTTTTGGTTTTCATCACAATACT
AATAATACTAATAATCAAAATCAATATCAAACTTACCCTCCTCTTCTCCCTTTACCTCCT
CTACTACCTCCTCTTCAACTACCTTTTCCTCAAAATCACAACTTCAGATCAAGAACCCAT
GTTCACAAACCTTCATTCAACCAGAATCATCCTTTTCTTGCCACCCCTTCTGATTCCAAG
ATTCAAGAAATCTCAGCCTCAAAGGTGCTCCAAAGGCAAAATGATGTGTCCAAACAGAAA
TATGGAAGGAGGGTCAAGGCTGCTGCTACCACCACAGAATCTCTTGTGGTGGCAAGAAGA
CCAGATTCTGGTGGTGTTGAAGGACAAGTAATCTCACTTCTTGCTAATCATTTCCTTGTC
CAATTTGATCCTTCACAGAGAATTTTCCATTATGATGTTGAAATTTCACCTCATCCATCC
AAGGATATTGCTAGGCTAATCAAGAAAAAGCTTGTGGAGGACCATTCTGTTATGCTATCA
GGTGCTCTTCCAGTTTATGATGGTGGAAGGACTATATATAGCCCTATTGAGTTTCAAAAT
AATAAGATTGAGTTTTACATTAGCCTGCCAATTCCTAGTAGTGGCAGCAACAAGTCTGGA
GAAATGGTTAAGTTGCAGAAAGAAGAACAGCAGATTAAGCTTTTCCGCGTTAACATCAAA
CTTATATCTAAATTTGATGGGAAAGAACTAAATAGCTACTTGAATAAAGAAGGAGATGAT
AGTGGGAGTCCACTTCCTCAGGAATATCTGCATGCTTTAGATGTCGTGTTGCGCGAGAGC
CCAACGGAGAAATGTATAACAGCTGGGAGATCGTTTTACTCGAGTTGTATGGGAGGAGAA
AAAGATATCGGGGGCGGAGCCGTGGCGCTAAGGGGGTTCTTTCAGAGTCTTAGACCAACA
CAGCAAGGACTTGCTCTCAATGTTGATTTCTCAGTGACTGCTTTCCATGAGAGTATCGGA
GTGATCACCTACTTGGAAAAACGCCTCGACTTCCTCCACGACATTTCTCACAGGAAAACA
AGAGGCTTGACAAATGATGAGAAGAAAGAGGTTGAGAAAGCACTAAAGAACATCAGGGTC
TTTGTTTGCCACAGAGAGACTGTTCAAAGATATCGTATTTACAGCTTAACCGAGGAGGTT
ACGGAGAACCTCTGCTTTCAGGACAGGGATGGAAAAATTCTAAGAATAGTGAACTACTTC
AAGGATCATTACAACTATGATATACTATATAGGAACTTGCCGTGCTTGCAGATTAGCAGA
AGTAAACCTTGTTATCTTCCGATGGAGCTTTGTATGATTTGTGAAGGACAGAAGTTTCTA
GGGAAGCTTTCGGATGATCAGACTGCAAGAATACTCAAAATGGGATGTCAAAGGCCAAGG
GAAAGAAAGGCTATTATAGACAGAGTGGTGACAGGATCGGTTGGACCAACAAGTGGCAAT
CACGCGAGTGACTTCAAACTCCAAATCTCGAAAGAAATGACTCAATTGTATGGGAGAATT
CTTCAGCCTCCTAAGCTTAAACTAGGTGATCGTGGTCAGGTTAGAAATCTTATTCCTTCC
CGGCTCGATAGGCAGTGGAATCTTCTGGACAGCCATGTCTTCGAAGGTACTCGAGTTGAG
AGATGGGCACTAATGAGTTTTGGTGGAACCTCTGATCAGAAGTCCCACATACCAAAATTC
ATAAACCAGTTATGTCAAAGGTGTGAGCAATTAGGCATCTTTCTGAACAAGAATACAGTA
CTTAACCCTCAGTTTGAACCCTTGCATTTGCTCAACAATGTTAAAAACTTAGAAACCAAA
CTCAACAAGTTACATAGAGCTTCATTTAACAATCTCCAACTTGTTATTTGTGTGATGGAG
AGAAAACACAAAGGATACGCGGACTTGAAAAGAATTGCTGAGACAAGCATTGGGGTTGTA
ACACAGTGCTGTTTGTACCCGAACCTTGGCAAAATTAGCTCACAGTTTTTGGCAAATTTG
GCTCTCAAGATCAATGCCAAAGTTGGGGGATGCACAGTTGCATTGTACAATTCATTGCCT
TCTCAAATACCACGGCTCTTCAAACATGACTGTCCAGTCATTTTTATGGGTGCGGATGTG
ACTCATCCGCACCCTCTTGATGATTTTAGCCCCTCCGTCGCTGCTGTAGTTGGTAGTGTA
AATTGGCCAGCAGCCAACAAGTATGTCTCCAGGATGAGATCCCAAACACATAGGCAGGAG
ATCATTCAAGATCTCAGCACGATGGTCGGGGAGATTATTGATGATTTTTATGAGGAGCTA
CTAAAACTCCCTGAGAGAATAATCTTCTTCCGGGATGGAGTAAGTGAAACACAATTCCTG
AAAGTACTTAAAGAGGAGCTCCAAGCAATTCGCATGGCATGTTCGAGATTTCCAGGTTAC
AAACCTCCCATTACTTTTGTGGTAGTTCAAAAAAGACACCATACTAGGCTATTTCCATGT
GAACTTGATCTGTCAACAACTAAAAACACGCTCTTCAACGAAAACATCCTACCAGGTACA
GTTGTAGATACAGTGATCACTCATCCAAGTGAGTTCGACTTCTATCTATGCAGCCATTGG
GGTGTAAAAGGAACAAGCAGGCCAATACATTACCATGTTCTATGGGATGAAAACCAGTTC
ACTTCTGATGAGCTACAAAAATTGGTATACAACCTTTGCTACACATTTGTGAGATGCACC
AAGCCTATTTCACTGGTGCCACCGGCTTATTACGCCCATTTAGCTGCATATAGAGGCAGA
CTGTATCTTGAACGTTCCGATTTGTCTACTCTAACAAGAAGTTCTAACATATCTCGCGCT
GCTCCACCGAAGACAACTCCTTTACCTAAACTCACTGAAAACATTAAAAAGCTTATGTTT
TACTGCTGA