Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062413
CDS Infomation

pacid=37456457 polypeptide=PGSC0003DMP400042019 locus=PGSC0003DMG400024288 ID=PGSC0003DMT400062413.v4.03 annot-version=v4.03
Sequence

ATGAGAGACTGGTCGCCAAGAGGTAAAAAGAGGCTTAAATTGGCATCTGTAGAAACAATC
GCGCTTGAACAGCTGATACAGAGCACAACATCAAGGGAAACAGAAGAAGAAATGGATGAT
AATTTAGAGACCAAGGGGAATTGGCTTCCTGATGACTTGCTTTTTGAGGTTTTTCTTCTA
CTTCCAGCTGAAACTCTCTGCAAACTGCGTTGCGTATGCAAGTCACTTCTCAACATGATC
AACAGTCTGGGTTTTATTGAAGATCACTTTCGTCAATCTGAGAGAGTTCTAATTGCTGAA
AATTCCTTTCACAAGGAAAACATACGGTCGCCTTTTCCACTGCCTTCAGATAAGAAGAAT
GAACTTTATTTCCATTTCTGGGATATCCATAGCGGCAAAGGCCATAAAGTTTGTATGCCA
GATACTTTGGGGAACATAAAGTGCATTTTGGCTGCCTGCAATGGTTTGGTCCTTGCCAAG
ATTGCGAAAAATGGAGGTCTAGTTGTTATGAATCCAAGTACACGGAACCACGTTAGAATG
CCTCTTGGTACGATTGGCTTCGTGCAGGAGTGCTATGCCTTCATGTTCAGCCATTTCACA
GGTTCTTATAAAGTAGTACACTTATTCCGCGGTAACTCTAGAAACATTCGCTGTGAGATC
CTGAACCTCACAACAAGATCGTGGCATGCAGTGGATGGACCTAAATCAGGAGAATTTGGA
TTGATCACAACTCATAGATCTGTTTCAGCAATTGGTGCTTTGTATTGGCTTCCACAGATT
GATGGCTGTAACCATGTTGTCTCCTTGGGATTTCATGATGAGAAATTCCTAACTGTACCT
CTACCAATCAGCAGCACGAAAAACGATCGACTCCTTGAAATTGGAGGGTCCCTGAGCTTC
ATAACTCATGCCACATTGAATTTGATTCAGGTATGGATACTGAAGAATGGGAATTGGTTA
AAGAGGTATAGTATCAACAGGTTATATGATATCACAGGATTTATTCCCCTTTGCGCGTCG
ACTAAGGAGATATTTTTCCAGAGAGAAGAAGGATACCCTTTGTTACATATTTACAACTTT
GAAGCTGAAGAAATGCAGGAGATCAATTTTAAAGGCACCAACAGAGTTGGAGATCTTTAT
ATGCCTCATGTAAAGTCCCTTGTTTCATGGGATAATCCTCAACTTCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400042019
PEP Infomation

pacid=37456457 transcript=PGSC0003DMT400062413 locus=PGSC0003DMG400024288 ID=PGSC0003DMT400062413.v4.03 annot-version=v4.03
Sequence

MRDWSPRGKKRLKLASVETIALEQLIQSTTSRETEEEMDDNLETKGNWLPDDLLFEVFLL
LPAETLCKLRCVCKSLLNMINSLGFIEDHFRQSERVLIAENSFHKENIRSPFPLPSDKKN
ELYFHFWDIHSGKGHKVCMPDTLGNIKCILAACNGLVLAKIAKNGGLVVMNPSTRNHVRM
PLGTIGFVQECYAFMFSHFTGSYKVVHLFRGNSRNIRCEILNLTTRSWHAVDGPKSGEFG
LITTHRSVSAIGALYWLPQIDGCNHVVSLGFHDEKFLTVPLPISSTKNDRLLEIGGSLSF
ITHATLNLIQVWILKNGNWLKRYSINRLYDITGFIPLCASTKEIFFQREEGYPLLHIYNF
EAEEMQEINFKGTNRVGDLYMPHVKSLVSWDNPQLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400062413
Transcript Infomation

pacid=37456457 locus=PGSC0003DMG400024288 ID=PGSC0003DMT400062413.v4.03 annot-version=v4.03
Sequence

ATGAGAGACTGGTCGCCAAGAGGTAAAAAGAGGCTTAAATTGGCATCTGTAGAAACAATC
GCGCTTGAACAGCTGATACAGAGCACAACATCAAGGGAAACAGAAGAAGAAATGGATGAT
AATTTAGAGACCAAGGGGAATTGGCTTCCTGATGACTTGCTTTTTGAGGTTTTTCTTCTA
CTTCCAGCTGAAACTCTCTGCAAACTGCGTTGCGTATGCAAGTCACTTCTCAACATGATC
AACAGTCTGGGTTTTATTGAAGATCACTTTCGTCAATCTGAGAGAGTTCTAATTGCTGAA
AATTCCTTTCACAAGGAAAACATACGGTCGCCTTTTCCACTGCCTTCAGATAAGAAGAAT
GAACTTTATTTCCATTTCTGGGATATCCATAGCGGCAAAGGCCATAAAGTTTGTATGCCA
GATACTTTGGGGAACATAAAGTGCATTTTGGCTGCCTGCAATGGTTTGGTCCTTGCCAAG
ATTGCGAAAAATGGAGGTCTAGTTGTTATGAATCCAAGTACACGGAACCACGTTAGAATG
CCTCTTGGTACGATTGGCTTCGTGCAGGAGTGCTATGCCTTCATGTTCAGCCATTTCACA
GGTTCTTATAAAGTAGTACACTTATTCCGCGGTAACTCTAGAAACATTCGCTGTGAGATC
CTGAACCTCACAACAAGATCGTGGCATGCAGTGGATGGACCTAAATCAGGAGAATTTGGA
TTGATCACAACTCATAGATCTGTTTCAGCAATTGGTGCTTTGTATTGGCTTCCACAGATT
GATGGCTGTAACCATGTTGTCTCCTTGGGATTTCATGATGAGAAATTCCTAACTGTACCT
CTACCAATCAGCAGCACGAAAAACGATCGACTCCTTGAAATTGGAGGGTCCCTGAGCTTC
ATAACTCATGCCACATTGAATTTGATTCAGGTATGGATACTGAAGAATGGGAATTGGTTA
AAGAGGTATAGTATCAACAGGTTATATGATATCACAGGATTTATTCCCCTTTGCGCGTCG
ACTAAGGAGATATTTTTCCAGAGAGAAGAAGGATACCCTTTGTTACATATTTACAACTTT
GAAGCTGAAGAAATGCAGGAGATCAATTTTAAAGGCACCAACAGAGTTGGAGATCTTTAT
ATGCCTCATGTAAAGTCCCTTGTTTCATGGGATAATCCTCAACTTCAATGA