Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062402
CDS Infomation

pacid=37457620 polypeptide=PGSC0003DMP400042015 locus=PGSC0003DMG400024285 ID=PGSC0003DMT400062402.v4.03 annot-version=v4.03
Sequence

ATGAAGATGAAAATGATATTATCATTATTAATATTTCATTGTTGTTTAATCCATTTAGTT
TCAGCCCAACTTCTTCAAGTTGGTTTTTACAATACAACATGTCCACAAACTGAAACTATT
GTTCGACAAGCTGTGCAGAATCAGTTCAATAGTGACCCTTCCATCACTGCAGCTTTGCTT
CGCATGCATTTTCATGATTGCTTTGTTAGAGGCTGTGACGCATCGATACTCATAAAGTCA
ATAGGTTCTAAGAAATCGGAGAGAGAAGCTGGCCCAAACAAAACGGTACGAGGATTCGAG
TTGATCGATAAAATCAAGAAAACCCTAGAAACTACCTGTCCATCAACAGTTTCATGTGCT
GACATAATAACACTAGCAACTAGAGACTCTGTAGCATTAGCTGGAGGCCCAAATTATCCA
ATTCCAACAGGTAGACGTGATGGGCTAATTTCAAATGCAGCAGATGTAAATTTACCAGGC
CCATCATTAACAATTCCACAAGCCCTCCAATTTTTCACAAATAAAGGACTTACTTTAAAT
GATATGGTCACACTATTAGGGGCTCATACAGTTGGAATCGCACATTGTAATTTTTTCCAA
GATAGGCTATCACCCGTACCTGATAAAACTATGGATCCTACGTTAGCGGCTCAACTATTG
AAAACTTGTGCTAAAAGTTCTGCAACGGCGTTTCTGGATCAAAATACGTCTTTTACTGTT
GATAATGAGTATTATAGACAAATTACGTTACGTAAAGGTATATTGACGATTGATCAAGAG
CTTACGTTGGATAAGTCAAGTGCTCCAATTGTTACAAGTTTTGCAGCTAATAAGGATGTA
TTTAGCCAAAGTTTTGCAAATGCAATGATAAAAATGGCAAATATTGATGTTTTAGTGGGG
AGTGCTGGAGAAATTAGGAAAAATTGTGGGGTTTTTAATCAGAAGGCTAATCGCAAGGTT
GTTAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042015
PEP Infomation

pacid=37457620 transcript=PGSC0003DMT400062402 locus=PGSC0003DMG400024285 ID=PGSC0003DMT400062402.v4.03 annot-version=v4.03
Sequence

MKMKMILSLLIFHCCLIHLVSAQLLQVGFYNTTCPQTETIVRQAVQNQFNSDPSITAALL
RMHFHDCFVRGCDASILIKSIGSKKSEREAGPNKTVRGFELIDKIKKTLETTCPSTVSCA
DIITLATRDSVALAGGPNYPIPTGRRDGLISNAADVNLPGPSLTIPQALQFFTNKGLTLN
DMVTLLGAHTVGIAHCNFFQDRLSPVPDKTMDPTLAAQLLKTCAKSSATAFLDQNTSFTV
DNEYYRQITLRKGILTIDQELTLDKSSAPIVTSFAANKDVFSQSFANAMIKMANIDVLVG
SAGEIRKNCGVFNQKANRKVVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400062402
Transcript Infomation

pacid=37457620 locus=PGSC0003DMG400024285 ID=PGSC0003DMT400062402.v4.03 annot-version=v4.03
Sequence

ATGAAGATGAAAATGATATTATCATTATTAATATTTCATTGTTGTTTAATCCATTTAGTT
TCAGCCCAACTTCTTCAAGTTGGTTTTTACAATACAACATGTCCACAAACTGAAACTATT
GTTCGACAAGCTGTGCAGAATCAGTTCAATAGTGACCCTTCCATCACTGCAGCTTTGCTT
CGCATGCATTTTCATGATTGCTTTGTTAGAGGCTGTGACGCATCGATACTCATAAAGTCA
ATAGGTTCTAAGAAATCGGAGAGAGAAGCTGGCCCAAACAAAACGGTACGAGGATTCGAG
TTGATCGATAAAATCAAGAAAACCCTAGAAACTACCTGTCCATCAACAGTTTCATGTGCT
GACATAATAACACTAGCAACTAGAGACTCTGTAGCATTAGCTGGAGGCCCAAATTATCCA
ATTCCAACAGGTAGACGTGATGGGCTAATTTCAAATGCAGCAGATGTAAATTTACCAGGC
CCATCATTAACAATTCCACAAGCCCTCCAATTTTTCACAAATAAAGGACTTACTTTAAAT
GATATGGTCACACTATTAGGGGCTCATACAGTTGGAATCGCACATTGTAATTTTTTCCAA
GATAGGCTATCACCCGTACCTGATAAAACTATGGATCCTACGTTAGCGGCTCAACTATTG
AAAACTTGTGCTAAAAGTTCTGCAACGGCGTTTCTGGATCAAAATACGTCTTTTACTGTT
GATAATGAGTATTATAGACAAATTACGTTACGTAAAGGTATATTGACGATTGATCAAGAG
CTTACGTTGGATAAGTCAAGTGCTCCAATTGTTACAAGTTTTGCAGCTAATAAGGATGTA
TTTAGCCAAAGTTTTGCAAATGCAATGATAAAAATGGCAAATATTGATGTTTTAGTGGGG
AGTGCTGGAGAAATTAGGAAAAATTGTGGGGTTTTTAATCAGAAGGCTAATCGCAAGGTT
GTTAATTAG