Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400062354
CDS Infomation

pacid=37455600 polypeptide=PGSC0003DMP400041982 locus=PGSC0003DMG400024268 ID=PGSC0003DMT400062354.v4.03 annot-version=v4.03
Sequence

ATGAATGTTGAGATAGATGATATAAAGATGAAAAAAACAACAGAAATTGATGAGCAAAAA
TGGGTGTATGATTCTTCTGTTGATTACAAAGGCAGAGTTCCTCTTAGAGCTTCAACTGGT
GGCTGGAAGGCCTCTTTCTTGATTATTGCAATTGAATTCAGTGAGAGGTTGAGTTACTTT
GGAATCGCCACAAGTTTGATCATATACCTAACAAAGGTCATTCATCAAGACCTTAAAACT
GCAGCAAAAAGTGTTAATTATTGGACAGGAGTTACTACTTTGATGCCACTGCTAGGAGGG
TTTGTTGCTGATGCATATTTAGGCAGATTTTACACAGTTCTTGCTTCAACTGTTGTCTAC
CTTCTGGGGTTGGTTCTTTTGACAATGTCTAGTGTGGTACCAAGCTTGAAGCCCTGTGGT
AATGACCTTTGTCAAGAACCTAGAAAGGTTCATGTGGTAGTCTTTTTCTTTGCTATCTAC
TTAATCTCAATTGGAACTGGTGGACACAAGCCTTCTTTAGAGAGTTTTGGAGCTGATCAA
TTTGATGATGATCATCCTCAAGAAAGAAGGAAGAAAATGTCTTTTTTCAATTGGTGGAGT
TTTGGACTTTGTGCTGGTGTACTACTTGGTGTCACTCTGATTGTTTATGTACAAGATCAT
GTTAGTTGGGCTGTGGCAGATGTCATTCTTACACTAGTTATGGCTGCTAGTTTAATCATT
TTTTGTGCTGGTAGACGATTCTATCGTTATCGAAAAGTTACTGAAAGTCCTTTAACAACA
ATGATACAAGTTCTTGTTGCTGCAATCAAGAAAAGAAATCTTGCATATCCTTCTAGTCCT
GCTGATCTACATGAAACTCAAAAGTCAGATACTAATCGAAGGAGGCTATGTCATACCAAA
GGGCTTAAGTTTCTTGATAAAGCTGCAATCTTTGATGAGGCAATAGACGAGAAACAGAAT
CCGTGGAAACTTGCAACTGTGACAAAGGTGGAAGAATTGAAGTTACTTATCAACATGATC
CCCATTTGGCTAACCACTTTACCATTTGGCATTTGCATAGCACAATCTTCAACATTTTTC
ATCAAACAAGGCGCGACACTTAACAGGAAGATCAGTCATGATTTTCAGATCCCACCGGCT
TCAATGTATGCCCTTGGAGCTATAGGCATGATAGCAACTGTCATTATCTACGACAAAATC
CTCGTACCTCTCCTAAGACGAGCAACAGGAAACGAGAGAGGCATTAGCATTCTTCAAAGG
ATCGGTATTGGAATGATACTCTCAGTTGCATCTATGATTGTTGCAGCATTAGTTGAAAGA
AAAAGACTAAACATTGTTCAAGAAAATCTACCTAAGGGTTCAATGTCAATGAGTGTGTTC
TGGCTAGCCCCTCAATTCCTTATCGTTGGTATTGGAGATGGATTCGCGCTAGTAGGATTA
CAAGAGTACTTCTATGATCAAGTACCTGATACAATAAGAAGTTTAGGCATTGCATTTTAC
CTAAGCGTCCTCGGTGCTGCAAATTTCTTAAGCAGTTTATTGATCACAATTGTGGATCAT
GTAACAGAAAAAGGCGGTAAGAGTTGGTTCGGAAAGGATCTAAATAGCAGCAGATTGGAT
TATTTCTACTACTTGTTAGCTACAATAACAGCAGTGAACTTGTTCATCTATGTTGTTGTT
GCAAGGAGCTATTCTTACAAGAATGTGCATAGTAGAAGAACAGCAGATGTGGCTAACTGC
TACGATGGCGATGATCGCGAAGCGATGGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400041982
PEP Infomation

pacid=37455600 transcript=PGSC0003DMT400062354 locus=PGSC0003DMG400024268 ID=PGSC0003DMT400062354.v4.03 annot-version=v4.03
Sequence

MNVEIDDIKMKKTTEIDEQKWVYDSSVDYKGRVPLRASTGGWKASFLIIAIEFSERLSYF
GIATSLIIYLTKVIHQDLKTAAKSVNYWTGVTTLMPLLGGFVADAYLGRFYTVLASTVVY
LLGLVLLTMSSVVPSLKPCGNDLCQEPRKVHVVVFFFAIYLISIGTGGHKPSLESFGADQ
FDDDHPQERRKKMSFFNWWSFGLCAGVLLGVTLIVYVQDHVSWAVADVILTLVMAASLII
FCAGRRFYRYRKVTESPLTTMIQVLVAAIKKRNLAYPSSPADLHETQKSDTNRRRLCHTK
GLKFLDKAAIFDEAIDEKQNPWKLATVTKVEELKLLINMIPIWLTTLPFGICIAQSSTFF
IKQGATLNRKISHDFQIPPASMYALGAIGMIATVIIYDKILVPLLRRATGNERGISILQR
IGIGMILSVASMIVAALVERKRLNIVQENLPKGSMSMSVFWLAPQFLIVGIGDGFALVGL
QEYFYDQVPDTIRSLGIAFYLSVLGAANFLSSLLITIVDHVTEKGGKSWFGKDLNSSRLD
YFYYLLATITAVNLFIYVVVARSYSYKNVHSRRTADVANCYDGDDREAMA*

Transcript Sequence

Transcript ID

PGSC0003DMT400062354
Transcript Infomation

pacid=37455600 locus=PGSC0003DMG400024268 ID=PGSC0003DMT400062354.v4.03 annot-version=v4.03
Sequence

ATGAATGTTGAGATAGATGATATAAAGATGAAAAAAACAACAGAAATTGATGAGCAAAAA
TGGGTGTATGATTCTTCTGTTGATTACAAAGGCAGAGTTCCTCTTAGAGCTTCAACTGGT
GGCTGGAAGGCCTCTTTCTTGATTATTGCAATTGAATTCAGTGAGAGGTTGAGTTACTTT
GGAATCGCCACAAGTTTGATCATATACCTAACAAAGGTCATTCATCAAGACCTTAAAACT
GCAGCAAAAAGTGTTAATTATTGGACAGGAGTTACTACTTTGATGCCACTGCTAGGAGGG
TTTGTTGCTGATGCATATTTAGGCAGATTTTACACAGTTCTTGCTTCAACTGTTGTCTAC
CTTCTGGGGTTGGTTCTTTTGACAATGTCTAGTGTGGTACCAAGCTTGAAGCCCTGTGGT
AATGACCTTTGTCAAGAACCTAGAAAGGTTCATGTGGTAGTCTTTTTCTTTGCTATCTAC
TTAATCTCAATTGGAACTGGTGGACACAAGCCTTCTTTAGAGAGTTTTGGAGCTGATCAA
TTTGATGATGATCATCCTCAAGAAAGAAGGAAGAAAATGTCTTTTTTCAATTGGTGGAGT
TTTGGACTTTGTGCTGGTGTACTACTTGGTGTCACTCTGATTGTTTATGTACAAGATCAT
GTTAGTTGGGCTGTGGCAGATGTCATTCTTACACTAGTTATGGCTGCTAGTTTAATCATT
TTTTGTGCTGGTAGACGATTCTATCGTTATCGAAAAGTTACTGAAAGTCCTTTAACAACA
ATGATACAAGTTCTTGTTGCTGCAATCAAGAAAAGAAATCTTGCATATCCTTCTAGTCCT
GCTGATCTACATGAAACTCAAAAGTCAGATACTAATCGAAGGAGGCTATGTCATACCAAA
GGGCTTAAGTTTCTTGATAAAGCTGCAATCTTTGATGAGGCAATAGACGAGAAACAGAAT
CCGTGGAAACTTGCAACTGTGACAAAGGTGGAAGAATTGAAGTTACTTATCAACATGATC
CCCATTTGGCTAACCACTTTACCATTTGGCATTTGCATAGCACAATCTTCAACATTTTTC
ATCAAACAAGGCGCGACACTTAACAGGAAGATCAGTCATGATTTTCAGATCCCACCGGCT
TCAATGTATGCCCTTGGAGCTATAGGCATGATAGCAACTGTCATTATCTACGACAAAATC
CTCGTACCTCTCCTAAGACGAGCAACAGGAAACGAGAGAGGCATTAGCATTCTTCAAAGG
ATCGGTATTGGAATGATACTCTCAGTTGCATCTATGATTGTTGCAGCATTAGTTGAAAGA
AAAAGACTAAACATTGTTCAAGAAAATCTACCTAAGGGTTCAATGTCAATGAGTGTGTTC
TGGCTAGCCCCTCAATTCCTTATCGTTGGTATTGGAGATGGATTCGCGCTAGTAGGATTA
CAAGAGTACTTCTATGATCAAGTACCTGATACAATAAGAAGTTTAGGCATTGCATTTTAC
CTAAGCGTCCTCGGTGCTGCAAATTTCTTAAGCAGTTTATTGATCACAATTGTGGATCAT
GTAACAGAAAAAGGCGGTAAGAGTTGGTTCGGAAAGGATCTAAATAGCAGCAGATTGGAT
TATTTCTACTACTTGTTAGCTACAATAACAGCAGTGAACTTGTTCATCTATGTTGTTGTT
GCAAGGAGCTATTCTTACAAGAATGTGCATAGTAGAAGAACAGCAGATGTGGCTAACTGC
TACGATGGCGATGATCGCGAAGCGATGGCTTAG